#------------------------------------------------------------------------------ #$Date: 2025-08-18 14:30:32 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301775 $ #$URL: svn://www.crystallography.net/cod/cif/1/50/77/1507738.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1507738 loop_ _publ_author_name 'Tong, Benny Meng Kiat' 'Chen, Hui' 'Chong, Sin Yee' 'Heng, Yi Li' 'Chiba, Shunsuke' _publ_contact_author ; Dr Shunsuke Chiba Division of Chemistry and Biological Chemistry School of Physical and Mathematical Sciences Nanyang Technological University 21 Nanyang Link Singapore 637371 Singapore ; _publ_section_title ; Formal [4 + 1]- and [5 + 1]-annulation by an s(n)2-conjugate addition sequence: stereoselective synthesis of highly substituted carbocycles. ; _journal_issue 11 _journal_name_full 'Organic letters' _journal_page_first 2826 _journal_page_last 2829 _journal_paper_doi 10.1021/ol301044e _journal_volume 14 _journal_year 2012 _chemical_formula_moiety 'C19 H21 N O4 S' _chemical_formula_sum 'C19 H21 N O4 S' _chemical_formula_weight 359.43 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 103.094(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.6939(7) _cell_length_b 7.7480(4) _cell_length_c 21.8687(12) _cell_measurement_reflns_used 6226 _cell_measurement_temperature 103(2) _cell_measurement_theta_max 29.58 _cell_measurement_theta_min 2.36 _cell_volume 1764.85(18) _computing_cell_refinement 'Bruker SAINT' _computing_data_collection 'Bruker APEX2' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 2008)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 2008)' _diffrn_ambient_temperature 103(2) _diffrn_measured_fraction_theta_full 0.999 _diffrn_measured_fraction_theta_max 0.999 _diffrn_measurement_device_type 'Bruker APEX-II CCD' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0194 _diffrn_reflns_av_sigmaI/netI 0.0229 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 30 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 14167 _diffrn_reflns_theta_full 29.58 _diffrn_reflns_theta_max 29.58 _diffrn_reflns_theta_min 2.36 _exptl_absorpt_coefficient_mu 0.207 _exptl_absorpt_correction_T_max 0.9559 _exptl_absorpt_correction_T_min 0.9218 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details sadabs _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.353 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 760 _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.40 _exptl_crystal_size_min 0.22 _refine_diff_density_max 0.410 _refine_diff_density_min -0.460 _refine_diff_density_rms 0.068 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.078 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 227 _refine_ls_number_reflns 4956 _refine_ls_number_restraints 1 _refine_ls_restrained_S_all 1.079 _refine_ls_R_factor_all 0.0405 _refine_ls_R_factor_gt 0.0346 _refine_ls_shift/su_max 0.008 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0502P)^2^+0.5160P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0915 _refine_ls_wR_factor_ref 0.0953 _reflns_number_gt 4323 _reflns_number_total 4956 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ol301044e_si_004.cif _cod_data_source_block 3fd _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M P2(1)/n _cod_database_code 1507738 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags C1 C 0.31766(10) 0.68819(14) 0.17632(5) 0.0138(2) Uani 1 1 d . C2 C 0.39058(10) 0.53499(14) 0.15400(5) 0.01318(19) Uani 1 1 d . H2 H 0.4604 0.5833 0.1354 0.016 Uiso 1 1 calc R C3 C 0.45277(10) 0.44575(15) 0.21636(5) 0.0165(2) Uani 1 1 d . H3 H 0.3834 0.3840 0.2315 0.020 Uiso 1 1 calc R C4 C 0.49869(11) 0.59496(17) 0.26122(6) 0.0214(2) Uani 1 1 d . H4A H 0.5822 0.6393 0.2556 0.026 Uiso 1 1 calc R H4B H 0.5086 0.5575 0.3053 0.026 Uiso 1 1 calc R C5 C 0.39476(11) 0.73385(16) 0.24436(5) 0.0184(2) Uani 1 1 d . H5A H 0.4339 0.8499 0.2453 0.022 Uiso 1 1 calc R H5B H 0.3377 0.7319 0.2743 0.022 Uiso 1 1 calc R C6 C 0.18403(11) 0.64314(14) 0.17657(5) 0.0151(2) Uani 1 1 d . C7 C 0.30673(10) 0.41591(14) 0.10523(5) 0.0141(2) Uani 1 1 d . H7A H 0.2796 0.3157 0.1272 0.017 Uiso 1 1 calc R H7B H 0.2284 0.4794 0.0842 0.017 Uiso 1 1 calc R C8 C 0.37430(10) 0.35080(14) 0.05586(5) 0.0150(2) Uani 1 1 d . C9 C 0.34152(11) 0.20989(16) -0.04278(5) 0.0198(2) Uani 1 1 d . H9A H 0.4034 0.1143 -0.0300 0.024 Uiso 1 1 calc R H9B H 0.3862 0.3060 -0.0587 0.024 Uiso 1 1 calc R C10 C 0.22883(12) 0.14963(18) -0.09289(6) 0.0240(2) Uani 1 1 d . H10A H 0.1862 0.0535 -0.0767 0.036 Uiso 1 1 calc R H10B H 0.2591 0.1112 -0.1297 0.036 Uiso 1 1 calc R H10C H 0.1680 0.2450 -0.1048 0.036 Uiso 1 1 calc R O2 O 0.29105(7) 0.26736(11) 0.01044(4) 0.01825(17) Uani 1 1 d . C11 C 0.55744(11) 0.31338(15) 0.21234(6) 0.0202(2) Uani 1 1 d U H11A H 0.5780 0.2462 0.2519 0.024 Uiso 1 1 calc R H11B H 0.5232 0.2319 0.1777 0.024 Uiso 1 1 calc R C12 C 0.67633(11) 0.39012(15) 0.20179(6) 0.0198(2) Uani 1 1 d U C13 C 0.77431(12) 0.45196(17) 0.19556(6) 0.0243(3) Uani 1 1 d . H13 H 0.8527 0.5014 0.1906 0.029 Uiso 1 1 calc R C14 C 0.22538(10) 0.81752(14) 0.05313(5) 0.0144(2) Uani 1 1 d . C15 C 0.09151(10) 0.82172(15) 0.03978(6) 0.0186(2) Uani 1 1 d . H15 H 0.0474 0.8673 0.0693 0.022 Uiso 1 1 calc R C16 C 0.02412(11) 0.75791(17) -0.01754(6) 0.0231(2) Uani 1 1 d . H16 H -0.0671 0.7598 -0.0276 0.028 Uiso 1 1 calc R C17 C 0.08969(11) 0.69123(17) -0.06027(6) 0.0228(2) Uani 1 1 d . H17 H 0.0429 0.6462 -0.0991 0.027 Uiso 1 1 calc R C18 C 0.22328(11) 0.68974(17) -0.04675(5) 0.0208(2) Uani 1 1 d . H18 H 0.2672 0.6454 -0.0766 0.025 Uiso 1 1 calc R C19 C 0.29216(10) 0.75307(15) 0.01034(5) 0.0168(2) Uani 1 1 d . H19 H 0.3834 0.7525 0.0201 0.020 Uiso 1 1 calc R N1 N 0.08002(10) 0.60780(13) 0.17643(5) 0.0197(2) Uani 1 1 d . O1 O 0.48585(8) 0.37138(12) 0.05641(4) 0.02179(19) Uani 1 1 d . O3 O 0.44118(8) 0.92181(11) 0.12534(4) 0.02015(18) Uani 1 1 d . O4 O 0.23669(8) 1.00731(11) 0.15301(4) 0.02159(18) Uani 1 1 d . S1 S 0.31120(2) 0.88179(3) 0.127747(12) 0.01461(8) Uani 1 1 d . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C1 0.0147(5) 0.0124(5) 0.0152(5) -0.0005(4) 0.0051(4) -0.0001(4) C2 0.0123(4) 0.0121(5) 0.0155(5) -0.0007(4) 0.0041(4) -0.0005(3) C3 0.0155(5) 0.0165(5) 0.0178(5) 0.0028(4) 0.0042(4) 0.0005(4) C4 0.0199(5) 0.0253(6) 0.0176(5) -0.0029(5) 0.0013(4) 0.0031(4) C5 0.0200(5) 0.0198(5) 0.0151(5) -0.0034(4) 0.0030(4) 0.0004(4) C6 0.0190(5) 0.0119(5) 0.0157(5) -0.0008(4) 0.0067(4) 0.0011(4) C7 0.0131(4) 0.0123(5) 0.0175(5) -0.0022(4) 0.0050(4) -0.0015(4) C8 0.0148(5) 0.0136(5) 0.0169(5) -0.0012(4) 0.0043(4) 0.0000(4) C9 0.0168(5) 0.0242(6) 0.0195(5) -0.0074(4) 0.0068(4) -0.0014(4) C10 0.0221(6) 0.0283(6) 0.0204(5) -0.0062(5) 0.0025(4) -0.0023(5) O2 0.0143(4) 0.0216(4) 0.0198(4) -0.0074(3) 0.0059(3) -0.0029(3) C11 0.0191(5) 0.0167(5) 0.0246(6) 0.0041(4) 0.0040(4) 0.0032(4) C12 0.0189(5) 0.0194(5) 0.0197(5) -0.0015(4) 0.0013(4) 0.0051(4) C13 0.0197(5) 0.0259(6) 0.0263(6) -0.0066(5) 0.0034(4) 0.0002(5) C14 0.0143(5) 0.0126(5) 0.0166(5) 0.0018(4) 0.0039(4) -0.0001(4) C15 0.0148(5) 0.0186(5) 0.0234(5) 0.0022(4) 0.0064(4) 0.0022(4) C16 0.0137(5) 0.0264(6) 0.0281(6) 0.0017(5) 0.0025(4) -0.0002(4) C17 0.0197(5) 0.0257(6) 0.0209(5) -0.0019(5) 0.0005(4) -0.0025(5) C18 0.0205(5) 0.0242(6) 0.0184(5) -0.0003(5) 0.0058(4) 0.0014(4) C19 0.0142(5) 0.0188(5) 0.0182(5) 0.0019(4) 0.0053(4) 0.0007(4) N1 0.0197(5) 0.0191(5) 0.0220(5) 0.0005(4) 0.0083(4) 0.0005(4) O1 0.0140(4) 0.0297(5) 0.0226(4) -0.0076(4) 0.0062(3) -0.0030(3) O3 0.0179(4) 0.0187(4) 0.0242(4) -0.0007(3) 0.0053(3) -0.0070(3) O4 0.0286(4) 0.0130(4) 0.0253(4) -0.0020(3) 0.0104(3) 0.0030(3) S1 0.01621(13) 0.01079(13) 0.01749(13) -0.00073(9) 0.00516(9) -0.00141(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C6 C1 C2 112.06(9) C6 C1 C5 110.60(9) C2 C1 C5 106.02(8) C6 C1 S1 106.70(7) C2 C1 S1 113.47(7) C5 C1 S1 107.95(7) C7 C2 C3 114.36(9) C7 C2 C1 114.85(8) C3 C2 C1 102.19(8) C7 C2 H2 108.4 C3 C2 H2 108.4 C1 C2 H2 108.4 C4 C3 C11 114.26(9) C4 C3 C2 103.95(9) C11 C3 C2 115.07(9) C4 C3 H3 107.7 C11 C3 H3 107.7 C2 C3 H3 107.7 C3 C4 C5 105.53(9) C3 C4 H4A 110.6 C5 C4 H4A 110.6 C3 C4 H4B 110.6 C5 C4 H4B 110.6 H4A C4 H4B 108.8 C4 C5 C1 105.46(9) C4 C5 H5A 110.6 C1 C5 H5A 110.6 C4 C5 H5B 110.6 C1 C5 H5B 110.6 H5A C5 H5B 108.8 N1 C6 C1 179.63(12) C8 C7 C2 113.40(8) C8 C7 H7A 108.9 C2 C7 H7A 108.9 C8 C7 H7B 108.9 C2 C7 H7B 108.9 H7A C7 H7B 107.7 O1 C8 O2 124.27(10) O1 C8 C7 125.56(10) O2 C8 C7 110.17(9) O2 C9 C10 107.16(9) O2 C9 H9A 110.3 C10 C9 H9A 110.3 O2 C9 H9B 110.3 C10 C9 H9B 110.3 H9A C9 H9B 108.5 C9 C10 H10A 109.5 C9 C10 H10B 109.5 H10A C10 H10B 109.5 C9 C10 H10C 109.5 H10A C10 H10C 109.5 H10B C10 H10C 109.5 C8 O2 C9 115.76(8) C12 C11 C3 114.01(10) C12 C11 H11A 108.8 C3 C11 H11A 108.8 C12 C11 H11B 108.8 C3 C11 H11B 108.8 H11A C11 H11B 107.6 C13 C12 C11 177.60(13) C12 C13 H13 180.0 C19 C14 C15 121.74(10) C19 C14 S1 119.17(8) C15 C14 S1 118.95(8) C16 C15 C14 118.63(11) C16 C15 H15 120.7 C14 C15 H15 120.7 C17 C16 C15 120.15(11) C17 C16 H16 119.9 C15 C16 H16 119.9 C16 C17 C18 120.70(11) C16 C17 H17 119.7 C18 C17 H17 119.7 C19 C18 C17 119.89(11) C19 C18 H18 120.1 C17 C18 H18 120.1 C18 C19 C14 118.89(10) C18 C19 H19 120.6 C14 C19 H19 120.6 O3 S1 O4 119.40(5) O3 S1 C14 109.51(5) O4 S1 C14 109.23(5) O3 S1 C1 106.77(5) O4 S1 C1 106.35(5) C14 S1 C1 104.50(5) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance C1 C6 1.4723(14) C1 C2 1.5581(15) C1 C5 1.5695(15) C1 S1 1.8303(11) C2 C7 1.5360(14) C2 C3 1.5392(15) C2 H2 1.0000 C3 C4 1.5237(16) C3 C11 1.5353(16) C3 H3 1.0000 C4 C5 1.5308(16) C4 H4A 0.9900 C4 H4B 0.9900 C5 H5A 0.9900 C5 H5B 0.9900 C6 N1 1.1448(15) C7 C8 1.5152(15) C7 H7A 0.9900 C7 H7B 0.9900 C8 O1 1.2009(13) C8 O2 1.3404(13) C9 O2 1.4590(13) C9 C10 1.5075(16) C9 H9A 0.9900 C9 H9B 0.9900 C10 H10A 0.9800 C10 H10B 0.9800 C10 H10C 0.9800 C11 C12 1.4683(16) C11 H11A 0.9900 C11 H11B 0.9900 C12 C13 1.1877(18) C13 H13 0.9500 C14 C19 1.3920(15) C14 C15 1.3951(15) C14 S1 1.7534(11) C15 C16 1.3876(17) C15 H15 0.9500 C16 C17 1.3888(17) C16 H16 0.9500 C17 C18 1.3917(16) C17 H17 0.9500 C18 C19 1.3876(16) C18 H18 0.9500 C19 H19 0.9500 O3 S1 1.4367(8) O4 S1 1.4441(8) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139040246