#------------------------------------------------------------------------------ #$Date: 2016-02-18 15:37:37 +0000 (Thu, 18 Feb 2016) $ #$Revision: 176729 $ #$URL: svn://www.crystallography.net/cod/cif/1/50/78/1507817.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1507817 loop_ _publ_author_name 'Mandal, Amal Kumar' 'Suresh, Moorthy' 'Das, Priyadip' 'Suresh, E.' 'Baidya, Mithu' 'Ghosh, Sudip K.' 'Das, Amitava' _publ_section_title ; Recognition of Hg2+ ion through restricted imine isomerization: crystallographic evidence and imaging in live cells. ; _journal_issue 12 _journal_name_full 'Organic letters' _journal_page_first 2980 _journal_page_last 2983 _journal_paper_doi 10.1021/ol3009733 _journal_volume 14 _journal_year 2012 _chemical_formula_sum 'C32 H22 Cl6 Hg2 I4 N4' _chemical_formula_weight 1584.02 _chemical_name_systematic ; ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 76.845(3) _cell_angle_beta 75.545(3) _cell_angle_gamma 65.076(2) _cell_formula_units_Z 1 _cell_length_a 8.7014(15) _cell_length_b 9.8508(18) _cell_length_c 14.078(3) _cell_measurement_reflns_used 4324 _cell_measurement_temperature 110(2) _cell_measurement_theta_max 27.54 _cell_measurement_theta_min 2.65 _cell_volume 1049.3(3) _computing_cell_refinement 'BRUKER SMART' _computing_data_collection 'BRUKER SMART' _computing_data_reduction 'BRUKER SAINT' _computing_molecular_graphics ORTEP _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 110(2) _diffrn_measured_fraction_theta_full 0.988 _diffrn_measured_fraction_theta_max 0.910 _diffrn_measurement_device_type 'BRUKER SMART APEX CCD DIFFRACTOMETER' _diffrn_measurement_method 'OMEGA-PHI SCAN' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0249 _diffrn_reflns_av_sigmaI/netI 0.0370 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 8928 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 28.26 _diffrn_reflns_theta_min 2.30 _exptl_absorpt_coefficient_mu 10.659 _exptl_absorpt_correction_T_max 0.4827 _exptl_absorpt_correction_T_min 0.1268 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details 'BRUKER SADABS' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 2.507 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plates _exptl_crystal_F_000 716 _exptl_crystal_size_max 0.33 _exptl_crystal_size_mid 0.23 _exptl_crystal_size_min 0.08 _refine_diff_density_max 2.339 _refine_diff_density_min -1.710 _refine_diff_density_rms 0.256 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.092 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 217 _refine_ls_number_reflns 4741 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.092 _refine_ls_R_factor_all 0.0494 _refine_ls_R_factor_gt 0.0475 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0483P)^2^+16.5919P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1177 _refine_ls_wR_factor_ref 0.1189 _reflns_number_gt 4568 _reflns_number_total 4741 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ol3009733_si_001.cif _cod_data_source_block HgI2(HGL) _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'MULTI-SCAN' changed to 'multi-scan' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1891 2012-01-12 08:04:46Z andrius Adding full bibliography for 1507816--1507818.cif. ; _cod_original_cell_volume 1049.4(3) _cod_original_sg_symbol_H-M P-1 _cod_database_code 1507817 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_calc_flag _atom_site_refinement_flags Hg1 Hg 0.71394(4) 0.91829(4) 0.31448(2) 0.02425(11) Uani 1 d . I1 I 0.40377(7) 0.99265(7) 0.27632(5) 0.02968(15) Uani 1 d . I2 I 0.86686(8) 1.05455(7) 0.37866(5) 0.03422(17) Uani 1 d . Cl1 Cl 0.7123(5) 0.5956(4) 0.1573(3) 0.0613(9) Uani 1 d . Cl2 Cl 1.0046(9) 0.3276(7) 0.0990(5) 0.122(2) Uani 1 d . Cl3 Cl 0.6566(12) 0.3417(8) 0.1225(6) 0.146(3) Uani 1 d . N1 N 0.8363(9) 0.6493(8) 0.3707(5) 0.0205(14) Uani 1 d . N2 N 0.9704(10) 0.7897(9) 0.1952(5) 0.0247(15) Uani 1 d . C1 C 0.7675(10) 0.5755(9) 0.4539(6) 0.0205(16) Uani 1 d . C2 C 0.6142(11) 0.6597(10) 0.5139(7) 0.0246(17) Uani 1 d . H2 H 0.5616 0.7640 0.4981 0.030 Uiso 1 calc R C3 C 0.5452(12) 0.5854(11) 0.5949(7) 0.032(2) Uani 1 d . H3 H 0.4439 0.6403 0.6341 0.038 Uiso 1 calc R C4 C 0.6219(12) 0.4289(11) 0.6214(7) 0.031(2) Uani 1 d . H4 H 0.5719 0.3813 0.6776 0.037 Uiso 1 calc R C5 C 0.7710(12) 0.3457(10) 0.5644(7) 0.0263(18) Uani 1 d . H5 H 0.8206 0.2414 0.5814 0.032 Uiso 1 calc R C6 C 0.8491(12) 0.4171(10) 0.4806(6) 0.0239(17) Uani 1 d . C7 C 1.0035(12) 0.3371(10) 0.4201(6) 0.0245(17) Uani 1 d . H7 H 1.0597 0.2332 0.4359 0.029 Uiso 1 calc R C8 C 1.0700(11) 0.4132(9) 0.3380(7) 0.0226(16) Uani 1 d . H8 H 1.1720 0.3623 0.2976 0.027 Uiso 1 calc R C9 C 0.9808(12) 0.5702(10) 0.3158(6) 0.0246(17) Uani 1 d . C10 C 1.0513(12) 0.6527(10) 0.2266(6) 0.0266(18) Uani 1 d . H10 H 1.1600 0.6015 0.1921 0.032 Uiso 1 calc R C11 C 1.0536(12) 0.8640(10) 0.1149(6) 0.0229(17) Uani 1 d . C12 C 0.9587(11) 0.9581(9) 0.0399(6) 0.0217(16) Uani 1 d . C13 C 0.7921(13) 0.9744(11) 0.0388(7) 0.0290(19) Uani 1 d . H13 H 0.7396 0.9209 0.0895 0.035 Uiso 1 calc R C14 C 0.7029(13) 1.0673(12) -0.0349(7) 0.031(2) Uani 1 d . H14 H 0.5916 1.0766 -0.0337 0.037 Uiso 1 calc R C15 C 1.2169(13) 0.8499(12) 0.1140(7) 0.033(2) Uani 1 d . H15 H 1.2761 0.7871 0.1643 0.039 Uiso 1 calc R C16 C 0.797(3) 0.392(2) 0.1625(15) 0.090(6) Uani 1 d . H16 H 0.8001 0.3481 0.2321 0.108 Uiso 1 calc R loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Hg1 0.02573(18) 0.02343(18) 0.02407(18) 0.00054(12) -0.00545(12) -0.01128(13) I1 0.0238(3) 0.0289(3) 0.0354(3) -0.0031(2) -0.0068(2) -0.0090(2) I2 0.0308(3) 0.0216(3) 0.0537(4) -0.0093(3) -0.0167(3) -0.0062(2) Cl1 0.059(2) 0.068(2) 0.065(2) -0.0288(17) 0.0078(16) -0.0330(17) Cl2 0.123(5) 0.089(4) 0.111(4) -0.037(3) 0.029(4) -0.016(3) Cl3 0.209(8) 0.124(5) 0.163(7) -0.054(5) -0.044(6) -0.097(6) N1 0.024(4) 0.020(3) 0.022(3) 0.000(3) -0.008(3) -0.012(3) N2 0.031(4) 0.030(4) 0.017(3) -0.005(3) 0.000(3) -0.016(3) C1 0.021(4) 0.018(4) 0.024(4) 0.003(3) -0.004(3) -0.012(3) C2 0.019(4) 0.020(4) 0.031(5) 0.001(3) -0.004(3) -0.006(3) C3 0.025(4) 0.027(5) 0.035(5) 0.004(4) -0.004(4) -0.007(4) C4 0.024(4) 0.030(5) 0.034(5) 0.005(4) -0.005(4) -0.012(4) C5 0.028(4) 0.020(4) 0.031(5) 0.014(3) -0.011(4) -0.014(3) C6 0.028(4) 0.025(4) 0.022(4) -0.001(3) -0.005(3) -0.014(4) C7 0.030(4) 0.022(4) 0.025(4) -0.001(3) -0.010(3) -0.012(4) C8 0.018(4) 0.018(4) 0.028(4) -0.006(3) -0.004(3) -0.002(3) C9 0.029(4) 0.028(4) 0.022(4) -0.004(3) -0.002(3) -0.017(4) C10 0.034(5) 0.030(5) 0.018(4) -0.005(3) -0.003(3) -0.015(4) C11 0.031(4) 0.023(4) 0.016(4) 0.000(3) -0.003(3) -0.014(4) C12 0.027(4) 0.020(4) 0.021(4) -0.001(3) -0.004(3) -0.012(3) C13 0.036(5) 0.038(5) 0.023(4) 0.000(4) -0.006(4) -0.024(4) C14 0.031(5) 0.047(6) 0.024(4) 0.002(4) -0.005(4) -0.027(4) C15 0.040(5) 0.042(5) 0.017(4) 0.008(4) -0.009(4) -0.022(5) C16 0.092(14) 0.097(14) 0.085(13) -0.025(11) 0.018(10) -0.053(12) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Hg Hg -2.3894 9.2266 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 N1 Hg1 N2 69.3(2) . . N1 Hg1 I1 109.31(16) . . N2 Hg1 I1 119.41(18) . . N1 Hg1 I2 109.13(16) . . N2 Hg1 I2 94.58(17) . . I1 Hg1 I2 135.56(2) . . C9 N1 C1 118.8(7) . . C9 N1 Hg1 116.1(5) . . C1 N1 Hg1 125.1(6) . . C10 N2 C11 119.2(8) . . C10 N2 Hg1 113.2(6) . . C11 N2 Hg1 124.9(6) . . N1 C1 C2 119.2(7) . . N1 C1 C6 120.9(8) . . C2 C1 C6 119.9(7) . . C3 C2 C1 118.8(8) . . C3 C2 H2 120.6 . . C1 C2 H2 120.6 . . C2 C3 C4 122.1(9) . . C2 C3 H3 119.0 . . C4 C3 H3 119.0 . . C5 C4 C3 119.9(8) . . C5 C4 H4 120.1 . . C3 C4 H4 120.1 . . C4 C5 C6 120.4(8) . . C4 C5 H5 119.8 . . C6 C5 H5 119.8 . . C5 C6 C7 122.7(8) . . C5 C6 C1 118.9(8) . . C7 C6 C1 118.4(8) . . C8 C7 C6 119.7(8) . . C8 C7 H7 120.2 . . C6 C7 H7 120.2 . . C7 C8 C9 118.6(8) . . C7 C8 H8 120.7 . . C9 C8 H8 120.7 . . N1 C9 C8 123.6(8) . . N1 C9 C10 117.6(8) . . C8 C9 C10 118.8(8) . . N2 C10 C9 122.9(9) . . N2 C10 H10 118.5 . . C9 C10 H10 118.5 . . C15 C11 N2 120.1(8) . . C15 C11 C12 122.1(8) . . N2 C11 C12 117.7(8) . . C13 C12 C11 123.4(8) . . C13 C12 C12 119.0(10) . 2_775 C11 C12 C12 117.7(10) . 2_775 C14 C13 C12 122.0(8) . . C14 C13 H13 119.0 . . C12 C13 H13 119.0 . . C13 C14 C15 119.5(9) . 2_775 C13 C14 H14 120.2 . . C15 C14 H14 120.2 2_775 . C11 C15 C14 119.8(8) . 2_775 C11 C15 H15 120.1 . . C14 C15 H15 120.1 2_775 . Cl2 C16 Cl3 114.4(12) . . Cl2 C16 Cl1 110.3(10) . . Cl3 C16 Cl1 109.6(12) . . Cl2 C16 H16 107.4 . . Cl3 C16 H16 107.4 . . Cl1 C16 H16 107.4 . . loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 Hg1 N1 2.423(7) . Hg1 N2 2.474(7) . Hg1 I1 2.6435(8) . Hg1 I2 2.6544(7) . Cl1 C16 1.81(2) . Cl2 C16 1.719(19) . Cl3 C16 1.74(2) . N1 C9 1.322(11) . N1 C1 1.373(10) . N2 C10 1.263(12) . N2 C11 1.413(10) . C1 C2 1.416(12) . C1 C6 1.419(12) . C2 C3 1.359(12) . C2 H2 0.9300 . C3 C4 1.398(13) . C3 H3 0.9300 . C4 C5 1.372(14) . C4 H4 0.9300 . C5 C6 1.405(11) . C5 H5 0.9300 . C6 C7 1.412(13) . C7 C8 1.367(12) . C7 H7 0.9300 . C8 C9 1.407(12) . C8 H8 0.9300 . C9 C10 1.479(12) . C10 H10 0.9300 . C11 C15 1.365(13) . C11 C12 1.414(12) . C12 C13 1.393(13) . C12 C12 1.462(16) 2_775 C13 C14 1.374(13) . C13 H13 0.9300 . C14 C15 1.438(12) 2_775 C14 H14 0.9300 . C15 C14 1.438(12) 2_775 C15 H15 0.9300 . C16 H16 0.9800 .