#------------------------------------------------------------------------------ #$Date: 2016-02-18 15:37:37 +0000 (Thu, 18 Feb 2016) $ #$Revision: 176729 $ #$URL: svn://www.crystallography.net/cod/cif/1/50/78/1507824.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_1507824 loop_ _publ_author_name 'Yang, Cui-Feng' 'Shen, Chen' 'Wang, Jian-Yong' 'Tian, Shi-Kai' _publ_section_title ; A highly diastereoselective decarboxylative mannich reaction of \b-keto acids with optically active N-sulfinyl \a-imino esters. ; _journal_issue 12 _journal_name_full 'Organic letters' _journal_page_first 3092 _journal_page_last 3095 _journal_paper_doi 10.1021/ol301180z _journal_volume 14 _journal_year 2012 _chemical_absolute_configuration ad _chemical_formula_sum 'C17 H25 N O5 S' _chemical_formula_weight 355.44 _space_group_IT_number 4 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 101.890(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 9.5206(4) _cell_length_b 10.0215(4) _cell_length_c 10.2741(4) _cell_measurement_reflns_used 5879 _cell_measurement_temperature 291(2) _cell_measurement_theta_max 29.0308 _cell_measurement_theta_min 3.2666 _cell_volume 959.23(7) _computing_cell_refinement 'CrysAlisPro (Oxford Diffraction Ltd.)' _computing_data_collection 'CrysAlisPro (Oxford Diffraction Ltd.)' _computing_data_reduction 'CrysAlisPro (Oxford Diffraction Ltd.)' _computing_molecular_graphics ; OLEX2: a complete structure solution, refinement and analysis program. Dolomanov et al., J. Appl. Cryst. (2009). 42, 339-341 ; _computing_publication_material ; OLEX2: a complete structure solution, refinement and analysis program. Dolomanov et al., J. Appl. Cryst. (2009). 42, 339-341 ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1997)' _diffrn_ambient_temperature 291(2) _diffrn_detector_area_resol_mean 15.9149 _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Gemini S Ultra, Oxford Diffraction' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Enhance (Mo) X-ray Source' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0183 _diffrn_reflns_av_sigmaI/netI 0.0229 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 9299 _diffrn_reflns_theta_full 26.36 _diffrn_reflns_theta_max 26.36 _diffrn_reflns_theta_min 3.27 _exptl_absorpt_coefficient_mu 0.193 _exptl_absorpt_correction_T_max 0.9444 _exptl_absorpt_correction_T_min 0.9338 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details ; CrysAlisPro, Oxford Diffraction Ltd., Version 1.171.34.44 (release 25-10-2010 CrysAlis171 .NET) (compiled Oct 25 2010,18:11:34) Empirical absorption correction using spherical harmonics, implemented in SCALE3 ABSPACK scaling algorithm. ; _exptl_crystal_density_diffrn 1.231 _exptl_crystal_density_method 'not measured' _exptl_crystal_F_000 380 _exptl_crystal_size_max 0.36 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.30 _refine_diff_density_max 0.371 _refine_diff_density_min -0.507 _refine_diff_density_rms 0.061 _refine_ls_abs_structure_details 'Flack H D (1983), Acta Cryst. A39, 876-881' _refine_ls_abs_structure_Flack 0.00(12) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.062 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 226 _refine_ls_number_reflns 3906 _refine_ls_number_restraints 34 _refine_ls_restrained_S_all 1.120 _refine_ls_R_factor_all 0.0654 _refine_ls_R_factor_gt 0.0605 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details ; calc w=1/[\s^2^(Fo^2^)+(0.1089P)^2^+0.2479P] where P=(Fo^2^+2Fc^2^)/3 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1668 _refine_ls_wR_factor_ref 0.1726 _reflns_number_gt 3552 _reflns_number_total 3906 _reflns_threshold_expression >2sigma(I) _cod_data_source_file ol301180z_si_002.cif _cod_data_source_block YCF09-95 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1891 2012-01-12 08:04:46Z andrius Adding full bibliography for 1507824.cif. ; _cod_database_code 1507824 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags S1 S 0.94009(8) 0.56575(9) 0.19890(7) 0.0519(2) Uani 1 1 d . O4 O 0.8752(4) 0.4367(3) 0.1768(3) 0.0764(9) Uani 1 1 d . O1 O 1.0683(3) 0.5111(3) 0.6390(2) 0.0648(7) Uani 1 1 d . N1 N 1.0211(3) 0.5742(3) 0.3546(2) 0.0532(6) Uani 1 1 d D O3 O 0.7804(3) 0.6096(3) 0.4508(3) 0.0693(8) Uani 1 1 d . C4 C 1.3019(3) 0.5812(4) 0.7406(3) 0.0521(7) Uani 1 1 d . C7 C 1.1634(3) 0.5918(3) 0.6416(3) 0.0486(7) Uani 1 1 d . C14 C 1.0814(4) 0.5736(5) 0.1052(3) 0.0633(8) Uani 1 1 d . O5 O 0.8521(4) 0.6819(4) 0.1674(3) 0.0839(10) Uani 1 1 d . C10 C 0.8773(4) 0.7029(4) 0.4928(3) 0.0550(8) Uani 1 1 d . O2 O 0.8613(3) 0.7939(3) 0.5651(3) 0.0783(9) Uani 1 1 d . C9 C 1.0110(4) 0.6922(3) 0.4345(3) 0.0505(7) Uani 1 1 d . H9 H 1.0099 0.7692 0.3755 0.061 Uiso 1 1 calc R C8 C 1.1445(4) 0.7070(3) 0.5450(3) 0.0532(7) Uani 1 1 d . H8A H 1.2285 0.7132 0.5055 0.064 Uiso 1 1 calc R H8B H 1.1376 0.7893 0.5929 0.064 Uiso 1 1 calc R C5 C 1.3383(5) 0.4571(5) 0.7983(4) 0.0725(11) Uani 1 1 d . H5 H 1.2740 0.3867 0.7774 0.087 Uiso 1 1 calc R C6 C 1.4681(5) 0.4353(7) 0.8865(5) 0.0883(12) Uani 1 1 d U H6 H 1.4945 0.3507 0.9199 0.106 Uiso 1 1 calc R C16 C 1.1776(6) 0.4529(6) 0.1397(6) 0.0884(16) Uani 1 1 d . H16B H 1.2165 0.4520 0.2337 0.133 Uiso 1 1 calc R H16C H 1.2545 0.4572 0.0924 0.133 Uiso 1 1 calc R H16A H 1.1227 0.3732 0.1150 0.133 Uiso 1 1 calc R C15 C 1.0046(7) 0.5755(7) -0.0413(4) 0.0972(15) Uani 1 1 d . H15A H 0.9607 0.4902 -0.0651 0.146 Uiso 1 1 calc R H15C H 1.0728 0.5939 -0.0960 0.146 Uiso 1 1 calc R H15B H 0.9320 0.6435 -0.0547 0.146 Uiso 1 1 calc R C3 C 1.3923(5) 0.6855(5) 0.7736(5) 0.0806(11) Uani 1 1 d U H3 H 1.3710 0.7692 0.7354 0.097 Uiso 1 1 calc R C17 C 1.1622(7) 0.7014(6) 0.1394(7) 0.0956(17) Uani 1 1 d . H17A H 1.0979 0.7755 0.1169 0.143 Uiso 1 1 calc R H17C H 1.2375 0.7074 0.0903 0.143 Uiso 1 1 calc R H17B H 1.2030 0.7031 0.2330 0.143 Uiso 1 1 calc R C11 C 0.6454(5) 0.6097(5) 0.5014(7) 0.0919(11) Uani 1 1 d U H11 H 0.6336 0.6946 0.5454 0.110 Uiso 1 1 calc R C13 C 0.5322(9) 0.5921(10) 0.3845(8) 0.140(2) Uani 1 1 d U H13C H 0.5150 0.6751 0.3373 0.210 Uiso 1 1 calc R H13B H 0.4459 0.5638 0.4111 0.210 Uiso 1 1 calc R H13A H 0.5606 0.5257 0.3277 0.210 Uiso 1 1 calc R C12 C 0.6543(10) 0.4994(9) 0.5947(9) 0.142(2) Uani 1 1 d U H12C H 0.6023 0.5216 0.6625 0.213 Uiso 1 1 calc R H12B H 0.7531 0.4830 0.6350 0.213 Uiso 1 1 calc R H12A H 0.6136 0.4208 0.5483 0.213 Uiso 1 1 calc R C1 C 1.5554(6) 0.5433(7) 0.9220(6) 0.0999(13) Uani 1 1 d U H1 H 1.6400 0.5314 0.9848 0.120 Uiso 1 1 calc R C2 C 1.5257(6) 0.6616(7) 0.8721(6) 0.0967(13) Uani 1 1 d U H2 H 1.5892 0.7316 0.8988 0.116 Uiso 1 1 calc R H4 H 1.019(6) 0.489(3) 0.382(5) 0.087(16) Uiso 1 1 d D loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 S1 0.0488(4) 0.0602(4) 0.0445(4) -0.0039(4) 0.0043(3) 0.0087(4) O4 0.0715(18) 0.085(2) 0.0660(18) -0.0036(15) -0.0021(14) -0.0255(16) O1 0.0574(14) 0.0758(16) 0.0564(13) 0.0059(12) 0.0008(11) -0.0201(12) N1 0.0619(14) 0.0553(15) 0.0416(11) 0.0009(13) 0.0089(10) 0.0217(15) O3 0.0489(12) 0.0794(18) 0.0808(17) -0.0303(13) 0.0163(11) 0.0059(11) C4 0.0449(14) 0.071(2) 0.0405(13) -0.0071(15) 0.0081(10) -0.0033(16) C7 0.0461(15) 0.058(2) 0.0420(13) -0.0070(12) 0.0089(11) -0.0056(14) C14 0.078(2) 0.064(2) 0.0530(16) -0.0008(19) 0.0238(15) 0.005(2) O5 0.084(2) 0.098(2) 0.0612(17) -0.0023(15) -0.0037(15) 0.0487(18) C10 0.0534(18) 0.0612(19) 0.0487(17) -0.0102(15) 0.0066(14) 0.0094(15) O2 0.0790(19) 0.0791(18) 0.0841(19) -0.0359(16) 0.0337(15) -0.0030(15) C9 0.0509(17) 0.0511(17) 0.0488(16) -0.0023(13) 0.0089(13) 0.0078(14) C8 0.0491(17) 0.0545(18) 0.0555(18) -0.0017(14) 0.0097(14) -0.0011(14) C5 0.060(2) 0.097(3) 0.061(2) 0.016(2) 0.0115(17) 0.000(2) C6 0.070(3) 0.111(2) 0.079(3) 0.028(3) 0.004(2) 0.004(2) C16 0.087(3) 0.100(4) 0.090(3) 0.001(3) 0.046(3) 0.032(3) C15 0.136(4) 0.107(4) 0.0505(19) 0.002(3) 0.026(2) 0.010(4) C3 0.078(3) 0.078(2) 0.082(3) -0.0166(19) 0.0092(17) -0.019(2) C17 0.099(4) 0.083(3) 0.104(4) 0.017(3) 0.019(3) -0.028(3) C11 0.063(2) 0.079(3) 0.144(3) -0.0296(18) 0.0442(18) 0.006(2) C13 0.128(3) 0.147(3) 0.141(2) -0.0052(19) 0.0174(17) -0.001(2) C12 0.141(3) 0.148(3) 0.142(2) 0.0097(18) 0.0395(18) 0.006(2) C1 0.0891(19) 0.1147(19) 0.092(2) -0.0031(16) 0.0106(16) 0.0004(15) C2 0.0850(19) 0.1029(17) 0.097(2) -0.0166(16) 0.0060(15) -0.0066(16) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle O4 S1 O5 119.0(2) O4 S1 N1 107.73(19) O5 S1 N1 108.47(17) O4 S1 C14 107.4(2) O5 S1 C14 108.0(2) N1 S1 C14 105.48(16) C9 N1 S1 121.6(2) C9 N1 H4 126(3) S1 N1 H4 103(3) C10 O3 C11 118.8(3) C3 C4 C5 119.7(4) C3 C4 C7 122.8(4) C5 C4 C7 117.5(3) O1 C7 C4 121.2(3) O1 C7 C8 120.6(3) C4 C7 C8 118.1(3) C17 C14 C16 111.8(4) C17 C14 C15 109.8(4) C16 C14 C15 112.6(4) C17 C14 S1 108.3(3) C16 C14 S1 108.7(3) C15 C14 S1 105.5(3) O2 C10 O3 124.6(3) O2 C10 C9 121.3(3) O3 C10 C9 114.0(3) N1 C9 C10 116.0(3) N1 C9 C8 110.9(3) C10 C9 C8 109.7(3) N1 C9 H9 106.5 C10 C9 H9 106.5 C8 C9 H9 106.5 C7 C8 C9 112.5(3) C7 C8 H8A 109.1 C9 C8 H8A 109.1 C7 C8 H8B 109.1 C9 C8 H8B 109.1 H8A C8 H8B 107.8 C6 C5 C4 121.9(5) C6 C5 H5 119.1 C4 C5 H5 119.1 C1 C6 C5 117.4(5) C1 C6 H6 121.3 C5 C6 H6 121.3 C14 C16 H16B 109.5 C14 C16 H16C 109.5 H16B C16 H16C 109.5 C14 C16 H16A 109.5 H16B C16 H16A 109.5 H16C C16 H16A 109.5 C14 C15 H15A 109.5 C14 C15 H15C 109.5 H15A C15 H15C 109.5 C14 C15 H15B 109.5 H15A C15 H15B 109.5 H15C C15 H15B 109.5 C4 C3 C2 117.4(5) C4 C3 H3 121.3 C2 C3 H3 121.3 C14 C17 H17A 109.5 C14 C17 H17C 109.5 H17A C17 H17C 109.5 C14 C17 H17B 109.5 H17A C17 H17B 109.5 H17C C17 H17B 109.5 C13 C11 C12 112.7(7) C13 C11 O3 105.1(6) C12 C11 O3 107.0(5) C13 C11 H11 110.6 C12 C11 H11 110.6 O3 C11 H11 110.6 C11 C13 H13C 109.5 C11 C13 H13B 109.5 H13C C13 H13B 109.5 C11 C13 H13A 109.5 H13C C13 H13A 109.5 H13B C13 H13A 109.5 C11 C12 H12C 109.5 C11 C12 H12B 109.5 H12C C12 H12B 109.5 C11 C12 H12A 109.5 H12C C12 H12A 109.5 H12B C12 H12A 109.5 C2 C1 C6 123.1(5) C2 C1 H1 118.5 C6 C1 H1 118.5 C1 C2 C3 120.4(6) C1 C2 H2 119.8 C3 C2 H2 119.8 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance S1 O4 1.431(3) S1 O5 1.432(3) S1 N1 1.629(2) S1 C14 1.810(4) O1 C7 1.211(4) N1 C9 1.454(4) N1 H4 0.90(2) O3 C10 1.322(4) O3 C11 1.482(5) C4 C3 1.352(6) C4 C5 1.391(6) C4 C7 1.494(4) C7 C8 1.509(5) C14 C17 1.498(7) C14 C16 1.514(6) C14 C15 1.532(6) C10 O2 1.206(4) C10 C9 1.519(5) C9 C8 1.527(5) C9 H9 0.9800 C8 H8A 0.9700 C8 H8B 0.9700 C5 C6 1.391(6) C5 H5 0.9300 C6 C1 1.367(9) C6 H6 0.9300 C16 H16B 0.9600 C16 H16C 0.9600 C16 H16A 0.9600 C15 H15A 0.9600 C15 H15C 0.9600 C15 H15B 0.9600 C3 C2 1.472(8) C3 H3 0.9300 C17 H17A 0.9600 C17 H17C 0.9600 C17 H17B 0.9600 C11 C13 1.450(9) C11 C12 1.455(10) C11 H11 0.9800 C13 H13C 0.9600 C13 H13B 0.9600 C13 H13A 0.9600 C12 H12C 0.9600 C12 H12B 0.9600 C12 H12A 0.9600 C1 C2 1.300(9) C1 H1 0.9300 C2 H2 0.9300 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A N1 H4 O2 0.90(2) 2.28(3) 3.073(4) 148(4) 2_746 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O4 S1 N1 C9 -136.5(3) O5 S1 N1 C9 -6.4(3) C14 S1 N1 C9 109.1(3) C3 C4 C7 O1 -160.2(4) C5 C4 C7 O1 21.0(5) C3 C4 C7 C8 19.4(5) C5 C4 C7 C8 -159.4(3) O4 S1 C14 C17 -173.4(3) O5 S1 C14 C17 57.1(4) N1 S1 C14 C17 -58.7(4) O4 S1 C14 C16 -51.8(4) O5 S1 C14 C16 178.7(3) N1 S1 C14 C16 62.9(4) O4 S1 C14 C15 69.2(4) O5 S1 C14 C15 -60.3(4) N1 S1 C14 C15 -176.2(4) C11 O3 C10 O2 -4.0(6) C11 O3 C10 C9 179.8(4) S1 N1 C9 C10 82.2(3) S1 N1 C9 C8 -151.8(3) O2 C10 C9 N1 176.8(3) O3 C10 C9 N1 -6.9(4) O2 C10 C9 C8 50.2(5) O3 C10 C9 C8 -133.5(3) O1 C7 C8 C9 -10.8(4) C4 C7 C8 C9 169.7(3) N1 C9 C8 C7 -62.4(4) C10 C9 C8 C7 67.1(4) C3 C4 C5 C6 -2.1(7) C7 C4 C5 C6 176.7(4) C4 C5 C6 C1 4.4(8) C5 C4 C3 C2 -0.9(7) C7 C4 C3 C2 -179.7(4) C10 O3 C11 C13 133.3(5) C10 O3 C11 C12 -106.6(6) C5 C6 C1 C2 -3.7(9) C6 C1 C2 C3 0.7(9) C4 C3 C2 C1 1.7(8)