#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/04/2000415.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2000415 loop_ _publ_author_name 'Verdonk, M. L.' 'Kanters, J. A.' 'Kroon, J.' _publ_contact_author ; Marcel L. Verdonk Bijvoet Center for Biomolecular Research Department of Crystal and Structural Chemistry Utrecht University Padualaan 8 3584 CH Utrecht ; _publ_section_title ; Structure of eltoprazine ; _journal_issue 12 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 2271 _journal_page_last 2273 _journal_volume 48 _journal_year 1992 _chemical_formula_moiety 'C12 H17 N2 O2 1+,(Cl 1-)1' _chemical_formula_sum 'C12 H17 Cl N2 O2' _chemical_formula_weight 256.73 _chemical_name_systematic ; 1-(2,3-dihydro-1,4-benzodioxin-5-yl)piperazine hydrochloride ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method 'PLATON TABLE ACC option' _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 7.3150(10) _cell_length_b 7.941(2) _cell_length_c 21.393(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 295 _cell_measurement_theta_max 18.01 _cell_measurement_theta_min 15.67 _cell_volume 1242.7(4) _computing_cell_refinement 'SET4 (de Boer, 1984)' _computing_data_reduction 'HELENA (Spek, 1990a)' _computing_molecular_graphics 'EUCLID (Spek, 1982)' _computing_publication_material 'PLATON92 (Spek, 1990b)' _computing_structure_refinement 'SHELX76 (Sheldrick, 1976)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1985)' _diffrn_ambient_temperature 295 _diffrn_measurement_device 'Enraf Nonius CAD4' _diffrn_measurement_method 'Background-peak-background from \w/2\q scan' _diffrn_radiation_source 'X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.120 _diffrn_reflns_av_sigmaI/netI 0.0482 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 27 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 2998 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 0.10 _diffrn_standards_decay_% 1.2 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.372 _exptl_crystal_description plate _exptl_crystal_F_000 544 _exptl_crystal_size_max 0.33 _exptl_crystal_size_mid 0.25 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.48 _refine_diff_density_min -0.48 _refine_ls_goodness_of_fit_obs 1.41 _refine_ls_hydrogen_treatment ; No hydrogen parameters were refined except for an overall displacement parameter ; _refine_ls_matrix_type full _refine_ls_number_constraints 51 _refine_ls_number_parameters 171 _refine_ls_number_reflns 850 _refine_ls_number_restraints 0 _refine_ls_R_factor_obs 0.069 _refine_ls_shift/esd_max 0.091 _refine_ls_shift/esd_mean 0.025 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme 1/[\s^2^(F)+0.0004F^2^] _refine_ls_wR_factor_obs 0.063 _reflns_number_observed 850 _reflns_number_total 2639 _reflns_observed_criterion I>2.5\s(I) _[local]_cod_data_source_file ab1011.cif _[local]_cod_data_source_block eltoprazine _[local]_cod_chemical_formula_sum_orig 'C12 H17 N2 O2 Cl1' _cod_database_code 2000415 loop_ _symmetry_equiv_pos_as_xyz +x,+y,+z 1/2+x,1/2-y,-z -x,1/2+y,1/2-z 1/2-x,-y,1/2+z loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 2 0 3 1 2 1 1 2 2 loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C 0.002 0.002 International_Tables_Vol_IV_Table_2.3.1 H 0 0 International_Tables_Vol_IV_Table_2.3.1 O 0.008 0.006 International_Tables_Vol_IV_Table_2.3.1 N 0.004 0.003 International_Tables_Vol_IV_Table_2.3.1 N 0.004 0.003 International_Tables_Vol_IV_Table_2.3.1 Cl 0.132 0.159 International_Tables_Vol_IV_Table_2.3.1 loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type O1 0.1400(10) 0.4225(8) 0.0017(3) 0.047(3) Uani O2 0.4210(10) 0.4142(7) 0.0945(3) 0.035(2) Uani N1 0.4980(10) 0.6923(9) 0.1637(3) 0.029(3) Uani N2 0.8300(10) 0.7830(10) 0.2272(4) 0.040(3) Uani C1 0.1760(10) 0.5580(10) 0.0392(4) 0.027(3) Uani C2 0.2750(10) 0.2890(10) 0.0058(5) 0.041(4) Uani C3 0.329(2) 0.2640(10) 0.0716(4) 0.037(4) Uani C4 0.3120(10) 0.5560(10) 0.0840(4) 0.029(3) Uani C5 0.3470(10) 0.7000(10) 0.1203(4) 0.029(3) Uani C6 0.2360(10) 0.8370(10) 0.1130(5) 0.040(4) Uani C7 0.0950(10) 0.8340(10) 0.0701(4) 0.037(4) Uani C8 0.0650(10) 0.7010(10) 0.0331(5) 0.036(4) Uani C9 0.502(2) 0.8310(10) 0.2085(4) 0.041(4) Uani C10 0.6470(10) 0.8050(10) 0.2568(4) 0.042(4) Uani C11 0.8240(10) 0.6420(10) 0.1808(5) 0.034(3) Uani C12 0.6780(10) 0.6770(10) 0.1325(4) 0.035(3) Uani Cl1 0.8903(4) 0.1561(3) 0.17850(10) 0.0490(10) Uani H1 0.867 0.898 0.2035 0.056(7) Uiso H2 0.930 0.755 0.2628 0.056(7) Uiso H3 0.217 0.174 -0.0123 0.056(7) Uiso H4 0.394 0.324 -0.0214 0.056(7) Uiso H5 0.421 0.158 0.0747 0.056(7) Uiso H6 0.209 0.240 0.0995 0.056(7) Uiso H7 0.258 0.948 0.1411 0.056(7) Uiso H8 0.007 0.942 0.0662 0.056(7) Uiso H9 -0.044 0.703 -0.0010 0.056(7) Uiso H10 0.530 0.947 0.1838 0.056(7) Uiso H11 0.371 0.840 0.2313 0.056(7) Uiso H12 0.615 0.694 0.2836 0.056(7) Uiso H13 0.651 0.913 0.2874 0.056(7) Uiso H14 0.955 0.630 0.1579 0.056(7) Uiso H15 0.792 0.525 0.2048 0.056(7) Uiso H16 0.673 0.575 0.0991 0.056(7) Uiso H17 0.709 0.793 0.1086 0.056(7) Uiso loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.037(5) 0.047(4) 0.058(5) -0.001(4) -0.009(4) -0.018(4) O2 0.036(5) 0.021(3) 0.048(4) 0.001(4) -0.005(4) -0.001(3) N1 0.042(5) 0.016(4) 0.030(5) 0.005(4) 0.000(4) -0.008(4) N2 0.045(6) 0.040(5) 0.034(5) -0.002(5) -0.019(5) 0.000(4) C1 0.026(6) 0.041(7) 0.013(5) 0.001(6) -0.002(5) 0.001(5) C2 0.033(7) 0.043(7) 0.046(7) 0.000(6) 0.004(6) -0.014(6) C3 0.034(7) 0.036(6) 0.040(6) 0.007(6) 0.014(6) 0.001(5) C4 0.026(6) 0.027(6) 0.034(6) 0.008(5) 0.013(5) 0.008(5) C5 0.028(6) 0.028(6) 0.032(6) -0.009(5) 0.006(5) 0.004(5) C6 0.045(7) 0.022(5) 0.052(7) -0.006(7) 0.000(6) 0.000(6) C7 0.033(7) 0.039(6) 0.038(6) 0.001(7) 0.009(6) 0.011(6) C8 0.026(7) 0.039(7) 0.043(7) 0.003(6) -0.008(6) 0.008(5) C9 0.045(7) 0.045(6) 0.033(6) -0.001(7) -0.004(6) 0.009(6) C10 0.053(8) 0.034(6) 0.040(6) -0.011(6) -0.003(6) -0.004(5) C11 0.024(5) 0.034(5) 0.044(6) 0.007(6) 0.003(6) -0.010(6) C12 0.019(6) 0.046(6) 0.039(6) -0.002(6) 0.013(5) -0.016(6) Cl1 0.052(2) 0.0370(10) 0.059(2) -0.009(2) -0.014(2) -0.002(2) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 . . 1.370(10) yes O1 C2 . . 1.450(10) yes O2 C3 . . 1.450(10) yes O2 C4 . . 1.400(10) yes N1 C5 . . 1.440(10) yes N1 C9 . . 1.460(10) yes N1 C12 . . 1.480(10) yes N2 C10 . . 1.490(10) yes N2 C11 . . 1.500(10) yes C1 C4 . . 1.380(10) yes C1 C8 . . 1.400(10) yes C2 C3 . . 1.480(10) yes C4 C5 . . 1.410(10) yes C5 C6 . . 1.370(10) yes C6 C7 . . 1.380(10) yes C7 C8 . . 1.340(10) yes C9 C10 . . 1.500(10) yes C11 C12 . . 1.510(10) yes N2 H1 . . 1.08 no N2 H2 . . 1.08 no C2 H3 . . 1.08 no C2 H4 . . 1.08 no C3 H5 . . 1.08 no C3 H6 . . 1.08 no C6 H7 . . 1.08 no C7 H8 . . 1.08 no C8 H9 . . 1.08 no C9 H10 . . 1.08 no C9 H11 . . 1.08 no C10 H12 . . 1.08 no C10 H13 . . 1.08 no C11 H14 . . 1.08 no C11 H15 . . 1.09 no C12 H16 . . 1.08 no C12 H17 . . 1.08 no loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C1 O1 C2 . . . 114.1(7) yes C3 O2 C4 . . . 110.0(7) yes C5 N1 C9 . . . 113.9(8) yes C5 N1 C12 . . . 113.2(6) yes C9 N1 C12 . . . 109.9(8) yes C10 N2 C11 . . . 110.1(6) yes O1 C1 C4 . . . 122.4(7) yes O1 C1 C8 . . . 118.1(7) yes C4 C1 C8 . . . 119.4(8) yes O1 C2 C3 . . . 109.8(8) yes O2 C3 C2 . . . 109.6(7) yes O2 C4 C1 . . . 122.1(7) yes O2 C4 C5 . . . 117.6(7) yes C1 C4 C5 . . . 120.3(7) yes N1 C5 C4 . . . 117.4(7) yes N1 C5 C6 . . . 124.2(8) yes C4 C5 C6 . . . 118.4(7) yes C5 C6 C7 . . . 120.4(8) yes C6 C7 C8 . . . 122.0(7) yes C1 C8 C7 . . . 119.3(8) yes N1 C9 C10 . . . 111.3(8) yes N2 C10 C9 . . . 111.1(8) yes N2 C11 C12 . . . 109.7(6) yes N1 C12 C11 . . . 109.6(7) yes C10 N2 H1 . . . 109.0 no C10 N2 H2 . . . 109.5 no C11 N2 H1 . . . 109.2 no C11 N2 H2 . . . 109.5 no H1 N2 H2 . . . 109.6 no O1 C2 H3 . . . 109.2 no O1 C2 H4 . . . 109.1 no C3 C2 H3 . . . 109.5 no C3 C2 H4 . . . 109 no H3 C2 H4 . . . 110 no O2 C3 H5 . . . 109 no O2 C3 H6 . . . 109.6 no C2 C3 H5 . . . 109.3 no C2 C3 H6 . . . 110 no H5 C3 H6 . . . 110 no C5 C6 H7 . . . 119.9 no C7 C6 H7 . . . 119.7 no C6 C7 H8 . . . 119.0 no C8 C7 H8 . . . 119.0 no C1 C8 H9 . . . 120.1 no C7 C8 H9 . . . 120.6 no N1 C9 H10 . . . 109.0 no N1 C9 H11 . . . 109 no C10 C9 H10 . . . 109 no C10 C9 H11 . . . 109.1 no H10 C9 H11 . . . 109 no N2 C10 H12 . . . 109.0 no N2 C10 H13 . . . 109.0 no C9 C10 H12 . . . 109.1 no C9 C10 H13 . . . 109.2 no H12 C10 H13 . . . 109 no N2 C11 H14 . . . 109.9 no N2 C11 H15 . . . 109 no C12 C11 H14 . . . 109 no C12 C11 H15 . . . 109.1 no H14 C11 H15 . . . 109.3 no N1 C12 H16 . . . 109.2 no N1 C12 H17 . . . 109.3 no C11 C12 H16 . . . 109.8 no C11 C12 H17 . . . 109.4 no H16 C12 H17 . . . 110 no _journal_paper_doi 10.1107/S0108270192008904