#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/31/2003110.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2003110 loop_ _publ_author_name 'Marc Hostettler' 'Henrik Birkedal' 'Manual Gardon' 'Gervais Chapuis' 'Dieter Schwarzenbach' 'Michel Bonin' _publ_section_title ; Phase-transition-induced twinning in the 1:1 adduct of hexamethylenetetramine and azelaic acid ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section B' _journal_page_first 448 _journal_page_last 458 _journal_paper_doi 10.1107/S0108768198017200 _journal_volume 55 _journal_year 1999 _chemical_formula_moiety 'C6 H12 N4,C9 H16 O4' _chemical_formula_sum 'C15 H28 N4 O4' _chemical_formula_weight 328.41 _chemical_name_common '1:1 adduct of hexamethylenetetramine and azelaic acid' _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _cell_angle_alpha 90.00 _cell_angle_beta 106.118(9) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.8907(7) _cell_length_b 26.071(2) _cell_length_c 11.8868(11) _cell_measurement_temperature 258.0(10) _cell_volume 1753.8(3) _computing_cell_refinement 'INDEX, CELL (STOE & CIE GmbH (1997) IPDS 2.87 Software Manual)' _computing_data_collection 'EXPOSE (STOE & CIE GmbH (1997) IPDS 2.87 Software Manual)' _computing_data_reduction ; PROFILE, EMS, INTEGRATE (STOE & CIE GmbH (1997) IPDS 2.87 Software Manual), XPREP Version 5.04, Siemens Analytical X-ray Insts. (1996) and home written programs ; _computing_molecular_graphics ; XP Version 5.04, Siemens Analytical X-ray Insts. (1996) ; _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 258.0(10) _diffrn_measured_fraction_theta_full 0.657 _diffrn_measured_fraction_theta_max 0.657 _diffrn_measurement_device_type 'Stoe IPDS imaging plate system' _diffrn_measurement_method oscillation _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 'see _diffrn_special_details' _diffrn_reflns_av_sigmaI/netI 0.0295 _diffrn_reflns_limit_h_max 5 _diffrn_reflns_limit_h_min -5 _diffrn_reflns_limit_k_max 25 _diffrn_reflns_limit_k_min -25 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 6256 _diffrn_reflns_theta_full 20.80 _diffrn_reflns_theta_max 20.80 _diffrn_reflns_theta_min 2.37 _exptl_absorpt_coefficient_mu 0.091 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.244 _exptl_crystal_density_method 'not measured' _exptl_crystal_description platelet _exptl_crystal_F_000 712 _exptl_crystal_size_max 0.3 _exptl_crystal_size_mid 0.2 _exptl_crystal_size_min 0.02 _refine_diff_density_max 0.168 _refine_diff_density_min -0.115 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.150 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 246 _refine_ls_number_reflns 1443 _refine_ls_number_restraints 8 _refine_ls_restrained_S_all 1.147 _refine_ls_R_factor_all 0.0469 _refine_ls_R_factor_gt 0.0469 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w=1/[\s^2^(Fo^2^)+(0.0908P)^2^+0.0702P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.1364 _reflns_number_gt 1443 _reflns_number_total 1443 _reflns_threshold_expression >2sigma(I) _cod_data_source_file se0259.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w=1/[\s^2^(Fo^2^)+(0.0908P)^2^+0.0702P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w=1/[\s^2^(Fo^2^)+(0.0908P)^2^+0.0702P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2003110 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1A -0.025(7) 0.875(2) 0.098(4) 0.108(12) Uani d PU 0.29(4) . . O O1B -0.056(2) 0.8552(4) 0.0475(16) 0.076(3) Uani d PU 0.71(4) . . O O2A 0.291(7) 0.8681(16) 0.048(4) 0.090(11) Uani d PU 0.29(4) . . O O2B 0.310(2) 0.8795(6) 0.0680(14) 0.075(4) Uani d PU 0.71(4) . . O H2O 0.3406 0.8557 0.1214 0.112 Uiso calc PR 0.71(4) . . H C11 0.0823(9) 0.88405(15) 0.0257(4) 0.0509(12) Uani d U 1 . . C C12 0.0111(8) 0.92394(16) -0.0675(4) 0.0568(13) Uani d . 1 . . C H12A 0.0357 0.9101 -0.1389 0.068 Uiso calc R 1 . . H H12B 0.1164 0.9530 -0.0446 0.068 Uiso calc R 1 . . H C13 -0.2383(8) 0.94317(15) -0.0946(4) 0.0575(13) Uani d . 1 . . C H13A -0.2578 0.9624 -0.0281 0.069 Uiso calc R 1 . . H H13B -0.3452 0.9141 -0.1068 0.069 Uiso calc R 1 . . H C14 -0.3034(9) 0.97712(18) -0.2026(5) 0.0692(15) Uani d . 1 . . C H14A -0.1861 1.0041 -0.1919 0.083 Uiso calc R 1 . . H H14B -0.2920 0.9567 -0.2690 0.083 Uiso calc R 1 . . H C15 -0.5437(8) 1.00182(18) -0.2334(4) 0.0607(12) Uani d . 1 . . C H15A -0.5499 1.0265 -0.1732 0.073 Uiso calc R 1 . . H H15B -0.6623 0.9758 -0.2354 0.073 Uiso calc R 1 . . H C16 -0.6007(9) 1.02870(18) -0.3506(4) 0.0666(15) Uani d . 1 . . C H16A -0.4717 1.0519 -0.3502 0.080 Uiso calc R 1 . . H H16B -0.6058 1.0031 -0.4105 0.080 Uiso calc R 1 . . H C17 -0.8278(9) 1.05880(16) -0.3857(4) 0.0596(14) Uani d . 1 . . C H17A -0.8190 1.0869 -0.3312 0.072 Uiso calc R 1 . . H H17B -0.9577 1.0368 -0.3814 0.072 Uiso calc R 1 . . H C18 -0.8753(8) 1.07994(17) -0.5081(4) 0.0569(13) Uani d . 1 . . C H18A -0.7358 1.0984 -0.5134 0.068 Uiso calc R 1 . . H H18B -0.8967 1.0512 -0.5620 0.068 Uiso calc R 1 . . H C19 -1.0829(9) 1.11470(15) -0.5487(5) 0.0546(12) Uani d U 1 . . C O3A -1.237(8) 1.1182(16) -0.499(5) 0.072(9) Uani d PU 0.29(4) . . O O3B -1.178(4) 1.1367(7) -0.486(2) 0.088(5) Uani d PU 0.71(4) . . O O4A -1.119(6) 1.1335(18) -0.652(4) 0.078(11) Uani d PU 0.29(4) . . O O4B -1.130(2) 1.1250(7) -0.6618(14) 0.067(4) Uani d PU 0.71(4) . . O H4O -1.2724 1.1373 -0.6868 0.101 Uiso calc PR 0.71(4) . . H N1 0.4557(6) 0.79563(12) 0.2069(3) 0.0460(9) Uani d . 1 . . N H1 0.3891 0.8230 0.1622 0.055 Uiso calc PR 0.29(4) . . H N2 0.4336(6) 0.70364(11) 0.2341(3) 0.0449(9) Uani d . 1 . . N H2 0.3519 0.6746 0.2058 0.054 Uiso calc PR 0.29(4) . . H N3 0.8159(6) 0.74534(13) 0.2758(3) 0.0495(10) Uani d . 1 . . N N4 0.5608(7) 0.75981(13) 0.4034(3) 0.0509(10) Uani d . 1 . . N C1 0.3276(8) 0.74864(15) 0.1633(4) 0.0486(10) Uani d . 1 . . C H1A 0.3282 0.7432 0.0826 0.058 Uiso calc R 1 . . H H1B 0.1645 0.7522 0.1648 0.058 Uiso calc R 1 . . H C2 0.7049(7) 0.78895(16) 0.2057(4) 0.0507(12) Uani d . 1 . . C H2A 0.7106 0.7841 0.1256 0.061 Uiso calc R 1 . . H H2B 0.7930 0.8198 0.2356 0.061 Uiso calc R 1 . . H C3 0.4510(9) 0.80276(16) 0.3295(4) 0.0566(13) Uani d . 1 . . C H3A 0.5338 0.8342 0.3600 0.068 Uiso calc R 1 . . H H3B 0.2885 0.8062 0.3319 0.068 Uiso calc R 1 . . H C4 0.6794(8) 0.69955(16) 0.2305(4) 0.0548(13) Uani d . 1 . . C H4A 0.7522 0.6701 0.2764 0.066 Uiso calc R 1 . . H H4B 0.6825 0.6939 0.1503 0.066 Uiso calc R 1 . . H C5 0.8048(8) 0.75397(17) 0.3963(5) 0.0589(12) Uani d . 1 . . C H5A 0.8938 0.7846 0.4271 0.071 Uiso calc R 1 . . H H5B 0.8783 0.7253 0.4448 0.071 Uiso calc R 1 . . H C6 0.4308(7) 0.71313(15) 0.3560(4) 0.0483(12) Uani d . 1 . . C H6A 0.2685 0.7163 0.3590 0.058 Uiso calc R 1 . . H H6B 0.5010 0.6841 0.4042 0.058 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1A 0.098(17) 0.16(3) 0.08(2) 0.007(19) 0.044(17) 0.057(19) O1B 0.065(4) 0.069(5) 0.084(9) -0.014(3) 0.007(5) 0.036(4) O2A 0.116(17) 0.09(2) 0.100(17) 0.062(18) 0.086(17) 0.028(14) O2B 0.066(5) 0.054(5) 0.092(8) -0.008(4) 0.003(5) 0.033(5) C11 0.058(3) 0.041(3) 0.053(4) -0.004(2) 0.015(3) 0.002(2) C12 0.071(3) 0.046(2) 0.052(3) -0.002(2) 0.014(3) 0.010(2) C13 0.071(3) 0.043(2) 0.060(3) 0.004(2) 0.020(3) 0.006(2) C14 0.085(4) 0.064(3) 0.061(4) 0.015(3) 0.023(3) 0.018(2) C15 0.074(3) 0.054(2) 0.055(3) 0.010(2) 0.019(3) 0.009(2) C16 0.080(4) 0.061(3) 0.061(4) 0.012(3) 0.023(3) 0.014(2) C17 0.075(3) 0.045(2) 0.060(4) 0.010(2) 0.022(3) 0.006(2) C18 0.070(3) 0.049(2) 0.052(3) 0.011(2) 0.017(3) 0.002(2) C19 0.071(4) 0.038(2) 0.059(4) 0.004(2) 0.025(3) -0.003(2) O3A 0.081(15) 0.07(2) 0.071(18) 0.031(14) 0.037(13) 0.023(17) O3B 0.129(13) 0.079(9) 0.066(5) 0.048(8) 0.044(8) 0.004(8) O4A 0.101(18) 0.09(2) 0.077(14) -0.003(12) 0.074(15) 0.014(13) O4B 0.082(7) 0.062(5) 0.050(5) 0.039(5) 0.006(5) 0.008(3) N1 0.051(2) 0.0436(19) 0.045(3) 0.0034(17) 0.0157(18) 0.0069(16) N2 0.047(2) 0.0436(19) 0.044(3) -0.0037(16) 0.0125(18) -0.0031(16) N3 0.038(2) 0.063(2) 0.049(3) 0.0004(17) 0.0128(18) 0.0026(18) N4 0.057(2) 0.058(2) 0.040(3) -0.0041(19) 0.017(2) -0.0025(18) C1 0.045(3) 0.058(3) 0.040(3) 0.001(2) 0.007(2) 0.000(2) C2 0.049(3) 0.058(3) 0.047(3) -0.005(2) 0.017(2) 0.005(2) C3 0.070(3) 0.049(2) 0.056(4) 0.001(2) 0.026(3) -0.008(2) C4 0.060(3) 0.054(3) 0.055(3) 0.015(2) 0.023(3) 0.002(2) C5 0.050(3) 0.071(3) 0.048(4) -0.008(2) 0.002(2) 0.003(2) C6 0.046(3) 0.056(3) 0.046(3) -0.002(2) 0.018(2) 0.007(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C11 O2B H2O 109.5 O1B C11 O1A 37(3) O1B C11 O2A 115.7(19) O1A C11 O2A 117(2) O1B C11 O2B 123.6(9) O1A C11 O2B 113(2) O2A C11 O2B 17(2) O1B C11 C12 122.2(7) O1A C11 C12 124.2(17) O2A C11 C12 116.7(17) O2B C11 C12 113.5(8) C11 C12 C13 116.7(4) C11 C12 H12A 108.1 C13 C12 H12A 108.1 C11 C12 H12B 108.1 C13 C12 H12B 108.1 H12A C12 H12B 107.3 C12 C13 C14 112.3(4) C12 C13 H13A 109.1 C14 C13 H13A 109.1 C12 C13 H13B 109.1 C14 C13 H13B 109.1 H13A C13 H13B 107.9 C15 C14 C13 117.1(4) C15 C14 H14A 108.0 C13 C14 H14A 108.0 C15 C14 H14B 108.0 C13 C14 H14B 108.0 H14A C14 H14B 107.3 C14 C15 C16 112.1(4) C14 C15 H15A 109.2 C16 C15 H15A 109.2 C14 C15 H15B 109.2 C16 C15 H15B 109.2 H15A C15 H15B 107.9 C17 C16 C15 116.7(4) C17 C16 H16A 108.1 C15 C16 H16A 108.1 C17 C16 H16B 108.1 C15 C16 H16B 108.1 H16A C16 H16B 107.3 C16 C17 C18 111.7(4) C16 C17 H17A 109.3 C18 C17 H17A 109.3 C16 C17 H17B 109.3 C18 C17 H17B 109.3 H17A C17 H17B 107.9 C19 C18 C17 116.8(4) C19 C18 H18A 108.1 C17 C18 H18A 108.1 C19 C18 H18B 108.1 C17 C18 H18B 108.1 H18A C18 H18B 107.3 O3B C19 O3A 28.1(18) O3B C19 O4A 116(2) O3A C19 O4A 119(3) O3B C19 O4B 122.4(13) O3A C19 O4B 121(3) O4A C19 O4B 11(3) O3B C19 C18 124.9(12) O3A C19 C18 123(2) O4A C19 C18 116.5(14) O4B C19 C18 112.0(8) C19 O4B H4O 109.5 C1 N1 C3 107.9(3) C1 N1 C2 108.3(3) C3 N1 C2 108.3(4) C1 N1 H1 110.7 C3 N1 H1 110.7 C2 N1 H1 110.7 C4 N2 C6 108.7(3) C4 N2 C1 107.9(3) C6 N2 C1 108.0(3) C4 N2 H2 110.7 C6 N2 H2 110.7 C1 N2 H2 110.7 C2 N3 C4 108.3(4) C2 N3 C5 107.8(3) C4 N3 C5 108.4(3) C3 N4 C6 108.0(4) C3 N4 C5 108.8(3) C6 N4 C5 107.9(3) N1 C1 N2 111.7(3) N1 C1 H1A 109.3 N2 C1 H1A 109.3 N1 C1 H1B 109.3 N2 C1 H1B 109.3 H1A C1 H1B 107.9 N3 C2 N1 112.0(3) N3 C2 H2A 109.2 N1 C2 H2A 109.2 N3 C2 H2B 109.2 N1 C2 H2B 109.2 H2A C2 H2B 107.9 N4 C3 N1 111.8(3) N4 C3 H3A 109.3 N1 C3 H3A 109.3 N4 C3 H3B 109.3 N1 C3 H3B 109.3 H3A C3 H3B 107.9 N3 C4 N2 112.2(3) N3 C4 H4A 109.2 N2 C4 H4A 109.2 N3 C4 H4B 109.2 N2 C4 H4B 109.2 H4A C4 H4B 107.9 N3 C5 N4 112.4(3) N3 C5 H5A 109.1 N4 C5 H5A 109.1 N3 C5 H5B 109.1 N4 C5 H5B 109.1 H5A C5 H5B 107.9 N4 C6 N2 111.7(3) N4 C6 H6A 109.3 N2 C6 H6A 109.3 N4 C6 H6B 109.3 N2 C6 H6B 109.3 H6A C6 H6B 107.9 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance N1 C1 1.457(5) N1 C3 1.477(6) N1 C2 1.482(5) N1 H1 .9100 N2 C4 1.464(5) N2 C6 1.475(6) N2 C1 1.477(5) N2 H2 .9100 N3 C2 1.454(6) N3 C4 1.457(6) N3 C5 1.469(7) N4 C3 1.459(6) N4 C6 1.464(5) N4 C5 1.471(6) O1A C11 1.22(3) O1B C11 1.190(11) O2A C11 1.25(3) O2B C11 1.298(14) O2B H2O .8700 C11 C12 1.492(6) C12 C13 1.500(6) C12 H12A .9700 C12 H12B .9700 C13 C14 1.518(7) C13 H13A .9700 C13 H13B .9700 C14 C15 1.505(6) C14 H14A .9700 C14 H14B .9700 C15 C16 1.512(6) C15 H15A .9700 C15 H15B .9700 C16 C17 1.507(6) C16 H16A .9700 C16 H16B .9700 C17 C18 1.507(6) C17 H17A .9700 C17 H17B .9700 C18 C19 1.490(6) C18 H18A .9700 C18 H18B .9700 C19 O3B 1.20(2) C19 O3A 1.22(5) C19 O4A 1.29(4) C19 O4B 1.322(15) O4B H4O .8700 C1 H1A .9700 C1 H1B .9700 C2 H2A .9700 C2 H2B .9700 C3 H3A .9700 C3 H3B .9700 C4 H4A .9700 C4 H4B .9700 C5 H5A .9700 C5 H5B .9700 C6 H6A .9700 C6 H6B .9700 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O2B H2O N1 . .87 1.89 2.730(16) 162.9 yes O4B H4O N2 2_454 .87 1.98 2.699(14) 139.6 yes C2 H2A O1B 1_655 .97 2.63 3.157(14) 114.8 yes C3 H3B O3B 3_475 .97 2.58 3.19(2) 121.4 yes C5 H5A O3B 3_575 .97 2.62 3.58(2) 170.1 yes C5 H5B O1B 4_676 .97 2.40 3.345(15) 163.2 yes C12 H12A O4B 3_474 .97 2.74 3.706(18) 176.3 yes N1 H1 O2A . .91 1.76 2.65(4) 165.0 yes N1 H1 O1A . .91 2.71 3.46(3) 139.9 yes N2 H2 O3A 2_444 .91 2.79 3.51(5) 137.7 yes N2 H2 O4A 2_444 .91 1.72 2.59(4) 160.4 yes C2 H2B O1A 1_655 .97 2.62 3.21(4) 119.7 yes C6 H6B O2A 4_576 .97 2.74 3.38(4) 124.4 yes C2 H2A N4 4_575 .97 2.79 3.682(6) 153.5 yes C1 H1B N3 1_455 .97 2.74 3.622(6) 151.8 yes C6 H6A N3 1_455 .97 2.68 3.580(6) 154.1 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C13 C12 C11 O1A -18(4) yes C13 C12 C11 O2A -180(2) yes C13 C12 C11 O1B 27.2(12) yes C13 C12 C11 O2B -161.7(9) yes C11 C12 C13 C14 -171.1(4) yes C12 C13 C14 C15 -175.7(4) yes C13 C14 C15 C16 -172.3(4) yes C14 C15 C16 C17 -174.7(4) yes C15 C16 C17 C18 -175.1(4) yes C16 C17 C18 C19 -174.2(4) yes C17 C18 C19 O3A -15(3) yes C17 C18 C19 O4A 179(2) yes C17 C18 C19 O3B 18.9(16) yes C17 C18 C19 O4B -170.7(10) yes