#------------------------------------------------------------------------------ #$Date: 2023-12-15 11:09:39 +0000 (Fri, 15 Dec 2023) $ #$Revision: 288340 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/32/2003226.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2003226 loop_ _publ_author_name 'Yuge, H.' 'Iwamoto, T.' _publ_contact_author ; Prof. Dr. Toschitake Iwamoto Department of Chemistry, College of Arts and Sciences, The University of Tokyo, Komaba, Meguro, Tokyo 153, Japan ; _publ_section_title ; Two-Dimensional Open-Frame Host Structure of the Inclusion Compound [Cd(tenH)~2~{Ni(CN)~4~}~2~].4C~6~H~5~NH~2~ (ten = 1,4-Diazabicyclo[2.2.2]octane) ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 374 _journal_page_last 377 _journal_paper_doi 10.1107/S0108270194009388 _journal_volume 51 _journal_year 1995 _chemical_formula_moiety 'C20 H26 Cd N12 Ni2 , 4C6 H7 N1' _chemical_formula_sum 'C44 H54 Cd N16 Ni2' _chemical_formula_weight 1036.82 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _cell_angle_alpha 90.00 _cell_angle_beta 92.24(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 10.537(2) _cell_length_b 10.615(3) _cell_length_c 21.101(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293 _cell_measurement_theta_max 17.45 _cell_measurement_theta_min 16.00 _cell_volume 2358.3(9) _computing_cell_refinement ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1987) ; _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1987) ; _computing_data_reduction 'SHELX-76 (Sheldrick, 1976)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_structure_refinement 'SHELX-76 (Sheldrick, 1976)' _computing_structure_solution 'SHELX-76 (Sheldrick, 1976)' _diffrn_measurement_device 'RIGAKU AFC-5R diffractometer' _diffrn_measurement_method \w/2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.011 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 29 _diffrn_reflns_limit_l_min -29 _diffrn_reflns_number 7697 _diffrn_reflns_theta_max 30.00 _diffrn_standards_decay_% 3.7 _diffrn_standards_interval_count 200 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.287 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.47 _exptl_crystal_density_meas 1.47(1) _exptl_crystal_density_method 'flotation in mesitylene-bromoform' _exptl_crystal_description plate _exptl_crystal_size_max 0.24 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.60 _refine_diff_density_min -0.46 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.369 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 397 _refine_ls_number_reflns 3654 _refine_ls_R_factor_obs 0.0417 _refine_ls_shift/esd_max 0.013 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/[\s^2^(F~o~)+0.00005F~o~^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_obs 0.0338 _reflns_number_observed 3654 _reflns_number_total 5554 _reflns_observed_criterion >4\s(F) _cod_data_source_file ab1195.cif _cod_data_source_block ab1195 _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(F~o~)+0.00005F~o~^2^]' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(F~o~)+0.00005F~o~^2^]'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 2358.4(9) _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2003226 loop_ _symmetry_equiv_pos_as_xyz +x,+y,+z 1/2-x,1/2+y,1/2-z -x,-y,-z 1/2+x,1/2-y,1/2+z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_22 _atom_site_aniso_U_23 _atom_site_aniso_U_33 Cd .0186(2) -.0007(3) .0020(2) .0176(2) .0012(3) .0341(2) Ni1 .0377(4) .0002(6) .0027(3) .0166(3) .0033(5) .0459(4) Ni2 .0173(3) .0008(6) .0018(3) .0411(4) .0036(6) .0386(4) N1 .055(2) -.002(2) .016(2) .019(2) .000(2) .046(3) N2 .072(3) .009(2) .011(2) .051(3) .004(2) .055(3) N3 .022(1) .001(3) .002(1) .049(2) -.001(3) .047(2) N4 .040(3) .002(3) -.001(2) .093(4) -.012(3) .050(3) C1 .040(2) .003(3) .005(2) .025(2) -.001(2) .038(3) C2 .047(3) .002(2) -.003(2) .023(3) .001(2) .058(3) C3 .026(2) .004(4) -.002(1) .038(2) .000(3) .035(2) C4 .016(2) .005(2) .003(2) .050(3) .007(2) .047(3) N11 .027(2) -.003(1) .002(1) .019(2) .001(1) .034(2) C11 .034(3) .008(2) -.000(2) .049(3) .006(2) .036(3) C12 .038(3) .007(3) -.003(2) .060(4) .001(3) .040(3) C13 .045(3) -.014(2) .006(2) .030(3) -.005(2) .037(3) C14 .056(4) -.008(3) .013(3) .034(3) .003(2) .043(3) C15 .039(3) -.003(2) .002(2) .024(2) .001(2) .040(3) C16 .046(3) .009(3) .004(3) .040(3) -.008(2) .040(3) N12 .038(2) .001(2) .005(2) .038(2) -.002(2) .033(2) N21 .056(3) -.004(3) .009(3) .073(4) -.003(3) .069(4) C21 .041(3) -.013(2) .007(3) .038(3) -.002(2) .056(3) C22 .057(4) -.022(4) .002(3) .067(4) .002(4) .053(3) C23 .066(5) -.018(4) -.016(5) .064(5) .027(4) .097(6) C24 .051(4) -.006(4) .016(5) .049(4) -.002(5) .146(8) C25 .074(5) -.021(3) .028(4) .045(4) -.012(3) .080(5) C26 .058(4) -.015(3) .002(3) .043(3) .002(3) .055(3) N31 .062(4) .009(3) .012(3) .048(3) .003(2) .050(3) C31 .059(3) .005(4) .010(2) .049(3) .002(3) .032(2) C32 .067(4) .022(4) .010(4) .066(4) .005(3) .071(4) C33 .063(5) -.002(5) -.014(4) .118(8) .027(5) .079(5) C34 .101(6) -.022(5) .007(4) .081(6) .009(4) .056(4) C35 .113(7) -.010(5) .015(5) .055(5) -.013(4) .076(5) C36 .057(4) .007(3) .011(3) .048(3) -.004(3) .069(4) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type Cd .0 .0 .0 .0234(1) Uani Ni1 .0 .5 .0 .0334(2) Uani Ni2 .5 .0 .0 .0323(2) Uani N1 -.0060(4) .2176(3) .0118(2) .040(1) Uani N2 -.0864(4) .5334(4) .1334(2) .060(2) Uani N3 .2190(3) .0019(5) .0214(2) .039(1) Uani N4 .5626(4) .1063(5) .1303(2) .061(2) Uani C1 -.0053(5) .3249(4) .0083(2) .034(1) Uani C2 -.0534(4) .5193(4) .0828(2) .043(2) Uani C3 .3260(3) .0012(5) .0147(2) .033(1) Uani C4 .5366(4) .0669(4) .0811(2) .038(2) Uani N11 -.0537(3) -.0314(3) .1106(2) .027(1) Uani C11 .0644(5) -.0631(5) .1478(2) .040(2) Uani C12 .0431(5) -.0591(6) .2189(3) .047(2) Uani C13 -.1462(5) -.1342(5) .1202(2) .037(2) Uani C14 -.1579(6) -.1638(5) .1908(2) .044(2) Uani C15 -.1085(5) .0854(4) .1372(2) .034(2) Uani C16 -.1499(5) .0639(5) .2051(3) .042(2) Uani N12 -.0969(4) -.0583(4) .2279(2) .036(1) Uani N21 -.0113(5) .3800(6) .2568(3) .066(2) Uani C21 .0993(5) .3101(5) .2488(3) .045(2) Uani C22 .1588(6) .2480(6) .2995(3) .059(2) Uani C23 .2624(7) .1718(7) .2901(4) .076(3) Uani C24 .3053(7) .1540(7) .2308(5) .082(3) Uani C25 .2478(7) .2145(6) .1803(3) .066(3) Uani C26 .1458(6) .2915(5) .1887(3) .052(2) Uani N31 -.1329(5) -.0909(5) .3566(2) .053(2) Uani C31 -.0492(5) -.0093(6) .3924(2) .047(2) Uani C32 .0733(7) -.0448(7) .4075(3) .068(3) Uani C33 .1547(8) .0364(9) .4416(4) .087(4) Uani C34 .1134(9) .1528(8) .4600(3) .079(3) Uani C35 -.0070(9) .1871(7) .4437(3) .081(3) Uani C36 -.0892(6) .1093(6) .4102(3) .058(2) Uani H1 .133(4) -.011(4) .135(2) .05(1) Uiso H2 .089(4) -.153(4) .133(2) .05(1) Uiso H3 .076(4) .006(4) .241(2) .06(2) Uiso H4 .075(5) -.130(5) .239(2) .06(2) Uiso H5 -.126(4) -.204(4) .098(2) .03(1) Uiso H6 -.225(4) -.111(5) .102(2) .06(2) Uiso H7 -.242(4) -.168(4) .204(2) .03(1) Uiso H8 -.115(5) -.244(5) .204(2) .07(2) Uiso H9 -.189(4) .106(4) .109(2) .05(1) Uiso H10 -.045(4) .150(4) .135(2) .05(1) Uiso H11 -.119(4) .122(4) .235(2) .04(1) Uiso H12 -.238(4) .059(4) .208(2) .04(1) Uiso H13 -.115(4) -.060(4) .272(2) .05(1) Uiso H20 -.010(6) .402(6) .293(2) .08(2) Uiso H21 -.026(5) .432(5) .223(2) .08(2) Uiso H22 .127(4) .266(4) .339(2) .05(2) Uiso H23 .290(6) .134(6) .324(3) .09(2) Uiso H24 .365(5) .113(5) .229(3) .07(2) Uiso H25 .272(5) .202(5) .138(2) .07(2) Uiso H26 .105(4) .334(4) .155(2) .03(1) Uiso H30 -.212(4) -.073(4) .362(2) .04(1) Uiso H31 -.118(5) -.160(5) .365(2) .06(2) Uiso H32 .104(5) -.121(5) .393(2) .06(2) Uiso H33 .229(6) .012(7) .444(3) .10(3) Uiso H34 .187(7) .206(6) .483(3) .13(3) Uiso H35 -.036(6) .262(6) .455(3) .11(3) Uiso H36 -.178(4) .129(4) .400(2) .05(2) Uiso loop_ _atom_type_symbol _atom_type_scat_source C 'SHELX-76 (Sheldrick, 1976)' H 'SHELX-76 (Sheldrick, 1976)' Cd 'International Tables Vol. IV Table 2.2B' N 'SHELX-76 (Sheldrick, 1976)' Ni 'International Tables Vol. IV Table 2.2B' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N1 Cd N3 90.1(2) yes N1 Cd N11 91.40(10) yes N3 Cd N11 94.60(10) yes C1 Ni1 C2 90.6(2) yes C3 Ni2 C4 90.8(2) yes Cd N1 C1 169.8(4) yes Cd N3 C3 161.8(3) yes Ni1 C1 N1 177.9(5) yes Ni1 C2 N2 178.8(4) yes Ni2 C3 N3 177.6(3) yes Ni2 C4 N4 177.9(4) yes Cd N11 C11 108.3(3) yes Cd N11 C13 114.1(3) yes Cd N11 C15 110.7(2) yes C11 N11 C13 107.7(4) yes C13 N11 C15 107.2(4) yes C15 N11 C11 108.7(4) yes N11 C11 C12 111.1(4) yes N11 C15 C16 111.0(4) yes N11 C13 C14 111.2(4) yes C11 C12 N12 108.0(4) yes C13 C14 N12 107.8(4) yes C15 C16 N12 108.4(4) yes C12 N12 C14 109.6(4) yes C14 N12 C16 109.6(4) yes C16 N12 C12 108.9(4) yes N21 C21 C22 120.9(5) no N21 C21 C26 120.7(6) no C21 C22 C23 120.3(6) no C22 C23 C24 120.5(7) no C23 C24 C25 119.9(8) no C24 C25 C26 120.5(7) no C25 C26 C21 120.6(6) no C26 C21 C22 118.1(5) no N31 C31 C32 120.8(6) no N31 C31 C36 120.4(5) no C31 C32 C33 120.3(7) no C32 C33 C34 120.4(8) no C33 C34 C35 118.5(8) no C34 C35 C36 122.4(8) no C35 C36 C31 119.6(7) no C36 C31 C32 118.8(6) no N11 C11 H1 111(3) no C12 C11 H1 113(3) no N11 C11 H2 106(2) no C12 C11 H2 111(2) no H1 C11 H2 105(4) no C11 C12 H3 117(3) no N12 C12 H3 107(3) no C11 C12 H4 111(3) no N12 C12 H4 107(3) no H3 C12 H4 105(4) no N11 C13 H5 111(3) no C14 C13 H5 111(3) no N11 C13 H6 109(3) no C14 C13 H6 111(3) no H5 C13 H6 103(4) no C13 C14 H7 114(3) no N12 C14 H7 106(3) no C13 C14 H8 114(3) no N12 C14 H8 108(3) no H7 C14 H8 108(4) no N11 C15 H9 106(3) no C16 C15 H9 108(3) no N11 C15 H10 107(3) no C16 C15 H10 113(3) no H9 C15 H10 112(4) no C15 C16 H11 116(3) no N12 C16 H11 104(3) no C15 C16 H12 113(3) no N12 C16 H12 107(3) no H11 C16 H12 109(4) no C12 N12 H13 111(3) no C14 N12 H13 113(3) no C16 N12 H13 104(3) no C21 N21 H20 107(5) no C21 N21 H21 110(4) no H20 N21 H21 124(6) no C21 C22 H22 115(3) no C23 C22 H22 124(3) no C22 C23 H23 114(4) no C24 C23 H23 126(4) no C23 C24 H24 115(5) no C25 C24 H24 125(5) no C24 C25 H25 123(3) no C26 C25 H25 116(4) no C21 C26 H26 117(3) no C25 C26 H26 122(3) no C31 N31 H30 112(3) no C31 N31 H31 110(4) no H30 N31 H31 111(5) no C31 C32 H32 120(3) no C33 C32 H32 120(3) no C32 C33 H33 114(5) no C34 C33 H33 125(5) no C33 C34 H34 112(4) no C35 C34 H34 129(4) no C34 C35 H35 120(5) no C36 C35 H35 117(5) no C31 C36 H36 116(3) no C35 C36 H36 125(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cd N1 2.325(3) yes Cd N3 2.334(3) yes Cd N11 2.446(3) yes Ni1 C1 1.868(4) yes Ni1 C2 1.868(5) yes Ni2 C3 1.871(4) yes Ni2 C4 1.879(5) yes C1 N1 1.141(5) yes C2 N2 1.145(6) yes C3 N3 1.142(4) yes C4 N4 1.142(5) yes N11 C11 1.483(5) yes N11 C13 1.483(5) yes N11 C15 1.486(5) yes N12 C12 1.495(6) yes N12 C14 1.497(6) yes N12 C16 1.485(6) yes C11 C12 1.528(7) yes C13 C14 1.531(7) yes C15 C16 1.532(7) yes N21 C21 1.397(7) no C21 C22 1.386(7) no C22 C23 1.379(9) no C23 C24 1.359(11) no C24 C25 1.365(10) no C25 C26 1.368(8) no C26 C21 1.390(7) no N31 C31 1.430(7) no C31 C32 1.370(7) no C32 C33 1.397(10) no C33 C34 1.371(10) no C34 C35 1.351(10) no C35 C36 1.373(9) no C36 C31 1.384(7) no C11 H1 0.95(4) no C11 H2 1.04(4) no C12 H3 0.90(5) no C12 H4 0.92(5) no C13 H5 0.91(4) no C13 H6 0.93(5) no C14 H7 0.94(4) no C14 H8 1.00(5) no C15 H9 1.04(5) no C15 H10 0.96(4) no C16 H11 0.93(4) no C16 H12 0.94(4) no N12 H13 0.95(4) no N21 H20 0.80(5) no N21 H21 0.92(5) no C22 H22 0.93(4) no C23 H23 0.87(6) no C24 H24 0.76(5) no C25 H25 0.94(5) no C26 H26 0.93(4) no N31 H30 0.86(4) no N31 H31 0.77(5) no C32 H32 0.93(5) no C33 H33 0.83(6) no C34 H34 1.06(7) no C35 H35 0.88(6) no C36 H36 0.98(4) no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag N2 N21 3.146(8) . yes N2 H21 2.24(5) . no N2 N31 3.254(7) 2_455 yes N2 H30 2.42(4) 2_455 no N4 N21 3.442(8) 2_545 yes N4 H20 2.77(6) 2_545 no N4 N31 3.308(7) 2_555 yes N4 H31 2.55(5) 2_555 no N12 N31 2.779(7) . yes N31 H13 1.84(4) . no loop_ _cod_changelog_entry_id _cod_changelog_entry_author _cod_changelog_entry_date _cod_changelog_entry_text 1 'Vaitkus, Antanas' 2023-12-15T13:08:16+02:00 ; Corrected the ATOM_TYPE loop by removing extra data values which were incorrectly copied from other data items, e.g. 'MSC/AFC Diffractometer Control Software ...'. ;