#------------------------------------------------------------------------------
#$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $
#$Revision: 301791 $
#$URL: svn://www.crystallography.net/cod/cif/2/00/35/2003564.cif $
#------------------------------------------------------------------------------
#
# This file is available in the Crystallography Open Database (COD),
# http://www.crystallography.net/. The original data for this entry
# were provided by IUCr Journals, http://journals.iucr.org/.
#
# The file may be used within the scientific community so long as
# proper attribution is given to the journal article from which the
# data were obtained.
#
data_2003564
loop_
_publ_author_name
'Kariuki, B. M.'
'Jones, W.'
_publ_section_title
;
 Five Salts of Berberine
;
_journal_issue                   6
_journal_name_full               'Acta Crystallographica Section C'
_journal_page_first              1234
_journal_page_last               1240
_journal_paper_doi               10.1107/S010827019401259X
_journal_volume                  51
_journal_year                    1995
_chemical_formula_moiety         'C20 H18 N O4 1+, Cl 1-, C2 H6 O, 0.5H2 O'
_chemical_formula_sum            'C22 H25 Cl N O5.5'
_chemical_formula_weight         426.88
_chemical_name_common
'Berberine chloride ethanol solvate hemihydrate'
_space_group_IT_number           2
_symmetry_cell_setting           triclinic
_symmetry_space_group_name_Hall  '-P 1'
_symmetry_space_group_name_H-M   'P -1'
_audit_creation_method           SHELXL
_cell_angle_alpha                77.587(7)
_cell_angle_beta                 73.299(7)
_cell_angle_gamma                78.228(8)
_cell_formula_units_Z            2
_cell_length_a                   7.3712(10)
_cell_length_b                   11.2724(10)
_cell_length_c                   13.3998(10)
_cell_measurement_reflns_used    25
_cell_measurement_temperature    293(2)
_cell_measurement_theta_max      15
_cell_measurement_theta_min      7
_cell_volume                     1029.40(19)
_computing_cell_refinement       'CAD4 Software'
_computing_data_collection       'CAD4 Software (Enraf Nonius, 1989)'
_computing_molecular_graphics    'DTMM (Crabbe & Appleyard, 1991)'
_computing_publication_material  SHELXL-92
_computing_structure_refinement  'SHELXL-92 (Sheldrick, 1992)'
_computing_structure_solution    'SHELXS-86 (Sheldrick, 1985)'
_diffrn_ambient_temperature      293(2)
_diffrn_measurement_device       'Enraf Nonius CAD4'
_diffrn_measurement_method       '2\q/\w scans'
_diffrn_radiation_monochromator  graphite
_diffrn_radiation_source         'sealed tube'
_diffrn_radiation_type           MoK\a
_diffrn_radiation_wavelength     0.71069
_diffrn_reflns_av_R_equivalents  0.0165
_diffrn_reflns_av_sigmaI/netI    0.2014
_diffrn_reflns_limit_h_max       8
_diffrn_reflns_limit_h_min       -8
_diffrn_reflns_limit_k_max       13
_diffrn_reflns_limit_k_min       -13
_diffrn_reflns_limit_l_max       15
_diffrn_reflns_limit_l_min       0
_diffrn_reflns_number            3788
_diffrn_reflns_theta_max         24.97
_diffrn_reflns_theta_min         1.61
_diffrn_standards_decay_%        0
_diffrn_standards_interval_count 100
_diffrn_standards_interval_time  60
_diffrn_standards_number         3
_exptl_absorpt_coefficient_mu    0.222
_exptl_absorpt_correction_type   none
_exptl_crystal_colour            Yellow
_exptl_crystal_density_diffrn    1.377
_exptl_crystal_description       Needles
_exptl_crystal_F_000             450
_exptl_crystal_size_max          0.4
_exptl_crystal_size_mid          0.1
_exptl_crystal_size_min          0.1
_refine_diff_density_max         0.590
_refine_diff_density_min         -0.434
_refine_ls_extinction_method     none
_refine_ls_goodness_of_fit_all   0.990
_refine_ls_goodness_of_fit_obs   1.302
_refine_ls_matrix_type           full
_refine_ls_number_parameters     277
_refine_ls_number_reflns         3615
_refine_ls_number_restraints     0
_refine_ls_restrained_S_all      1.125
_refine_ls_restrained_S_obs      1.302
_refine_ls_R_factor_all          0.1260
_refine_ls_R_factor_obs          0.0562
_refine_ls_shift/esd_max         0.071
_refine_ls_shift/esd_mean        0.005
_refine_ls_structure_factor_coef Fsqd
_refine_ls_weighting_scheme
;calc w = 1/[\s^2^(F~o~^2^)+(0.0941P)^2^+0.0000P] where
P = (F~o~^2^+2F~c~^2^)/3
;
_refine_ls_wR_factor_all         0.1879
_refine_ls_wR_factor_obs         0.1534
_reflns_number_observed          1916
_reflns_number_total             3616
_reflns_observed_criterion       >2sigma(I)
_cod_data_source_file            hu1131.cif
_cod_data_source_block           II
_cod_depositor_comments
;
 Marking attached hydrogen atoms.

 Antanas Vaitkus,
 2017-03-24

The following automatic conversions were performed:
'_exptl_absorpt_correction_type' value 'None' changed to 'none' according
to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named
'cif_core.dic' version 2.4.1 from 2010-06-29.

Automatic conversion script
Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius 

The following automatic conversions were performed:

'_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic'
according to /home/saulius/struct/CIF-dictionaries/cif_core.dic
dictionary named 'cif_core.dic' version 2.4.1 from
2010-06-29.

'_exptl_absorpt_correction_type' value 'None' changed to
'none' according to
/home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named
'cif_core.dic' version 2.4.1 from 2010-06-29.

Automatic conversion script
Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana 
;
_cod_original_cell_volume        1029.4(2)
_cod_original_formula_sum        'C22 H25 Cl N O5.50'
_cod_database_code               2003564
loop_
_symmetry_equiv_pos_as_xyz
'x, y, z'
'-x, -y, -z'
loop_
_atom_site_aniso_label
_atom_site_aniso_U_11
_atom_site_aniso_U_12
_atom_site_aniso_U_13
_atom_site_aniso_U_22
_atom_site_aniso_U_23
_atom_site_aniso_U_33
Cl1 0.0928(9) 0.0159(6) -0.0206(6) 0.0858(8) -0.0185(6) 0.0643(7)
N1 0.0353(15) -0.0025(11) -0.0055(11) 0.0345(14) -0.0135(12) 0.0388(15)
O1 0.075(2) -0.0036(14) -0.0107(12) 0.066(2) -0.0046(12) 0.0313(13)
O2 0.079(2) -0.0021(14) -0.0160(13) 0.060(2) 0.0092(13) 0.050(2)
O3 0.0481(14) -0.0007(11) -0.0070(11) 0.0569(15) -0.0172(11) 0.0406(13)
O4 0.059(2) -0.0029(11) -0.0114(11) 0.0455(14) 0.0000(11) 0.0436(13)
O5 0.074(2) 0.0085(14) -0.0156(14) 0.069(2) -0.0267(14) 0.059(2)
O6 0.075(4) -0.012(3) -0.017(3) 0.063(3) -0.011(3) 0.109(5)
C1 0.075(3) -0.002(2) -0.016(2) 0.080(3) 0.000(2) 0.038(2)
C2 0.042(2) -0.009(2) -0.013(2) 0.051(2) 0.009(2) 0.042(2)
C3 0.040(2) -0.006(2) -0.0076(15) 0.046(2) -0.005(2) 0.039(2)
C4 0.061(2) -0.001(2) -0.018(2) 0.037(2) -0.003(2) 0.064(2)
C5 0.046(2) -0.0054(15) -0.015(2) 0.033(2) -0.0060(15) 0.049(2)
C6 0.041(2) -0.0014(14) -0.0089(15) 0.034(2) -0.009(2) 0.044(2)
C7 0.031(2) -0.0078(13) -0.0078(14) 0.036(2) -0.0076(14) 0.043(2)
C8 0.032(2) -0.0067(13) -0.0065(13) 0.035(2) -0.0115(14) 0.035(2)
C9 0.067(3) 0.012(2) -0.012(2) 0.038(2) -0.021(2) 0.054(2)
C10 0.082(3) 0.000(2) -0.018(2) 0.037(2) -0.013(2) 0.058(2)
C11 0.043(2) -0.0072(15) -0.0094(14) 0.040(2) -0.0123(14) 0.034(2)
C12 0.030(2) -0.0058(13) -0.0088(14) 0.033(2) -0.0114(14) 0.041(2)
C13 0.036(2) -0.0062(14) -0.0058(13) 0.035(2) -0.0142(14) 0.034(2)
C14 0.029(2) -0.0058(13) -0.0106(14) 0.035(2) -0.0098(14) 0.038(2)
C15 0.032(2) -0.0001(13) -0.0070(14) 0.037(2) -0.0157(15) 0.046(2)
C16 0.041(2) -0.0025(15) -0.011(2) 0.037(2) -0.009(2) 0.049(2)
C17 0.034(2) -0.0053(15) -0.0115(14) 0.042(2) -0.0018(15) 0.041(2)
C18 0.033(2) -0.0057(14) -0.0050(14) 0.044(2) -0.0114(14) 0.033(2)
C19 0.074(3) 0.002(2) -0.019(2) 0.038(2) 0.006(2) 0.062(2)
C20 0.093(3) -0.011(3) -0.033(3) 0.093(3) -0.042(3) 0.070(3)
C21 0.132(5) -0.032(4) -0.036(4) 0.106(4) -0.054(4) 0.128(5)
C22 0.067(3) -0.001(2) -0.014(2) 0.070(3) -0.023(2) 0.069(3)
loop_
_atom_site_label
_atom_site_occupancy
_atom_site_fract_x
_atom_site_fract_y
_atom_site_fract_z
_atom_site_U_iso_or_equiv
_atom_site_thermal_displace_type
_atom_site_calc_flag
_atom_site_refinement_flags
_atom_site_type_symbol
_atom_site_attached_hydrogens
Cl1 1 0.3006(2) -0.16466(11) 1.19251(9) 0.0843(4) Uani d . Cl 0
N1 1 0.1119(3) 0.6655(2) 1.0291(2) 0.0363(6) Uani d . N 0
O1 1 0.2332(4) 0.6883(2) 0.5532(2) 0.0600(7) Uani d . O 0
O2 1 0.1256(4) 0.8960(2) 0.5482(2) 0.0672(8) Uani d . O 0
O3 1 0.1367(3) 0.4666(2) 1.3215(2) 0.0491(6) Uani d . O 0
O4 1 0.3028(3) 0.2269(2) 1.3416(2) 0.0518(6) Uani d . O 0
O5 1 0.3248(4) 0.3295(3) 0.7602(2) 0.0680(8) Uani d . O 0
H5 1 0.4259(64) 0.2805(40) 0.7733(33) 0.082 Uiso d . H 0
O6 0.50 0.4026(8) 0.0143(5) 0.9589(5) 0.084(2) Uani d P O 2
C1 1 0.1514(6) 0.7955(4) 0.4937(3) 0.0674(12) Uani d . C 0
H11 1 0.0292(6) 0.7839(4) 0.4867(3) 0.081 Uiso calc R H 0
H12 1 0.2358(6) 0.8120(4) 0.4235(3) 0.081 Uiso calc R H 0
C2 1 0.1290(5) 0.8411(3) 0.6494(3) 0.0468(9) Uani d . C 0
C3 1 0.1927(5) 0.7170(3) 0.6528(2) 0.0426(8) Uani d . C 0
C4 1 0.0834(5) 0.8957(3) 0.7363(3) 0.0555(10) Uani d . C 0
H41 1 0.0417(5) 0.9798(3) 0.7327(3) 0.067 Uiso calc R H 0
C5 1 0.1019(5) 0.8202(3) 0.8309(3) 0.0424(8) Uani d . C 0
C6 1 0.2115(5) 0.6418(3) 0.7435(2) 0.0403(8) Uani d . C 0
H61 1 0.2536(5) 0.5579(3) 0.7453(2) 0.048 Uiso calc R H 0
C7 1 0.1650(4) 0.6951(3) 0.8357(2) 0.0360(7) Uani d . C 0
C8 1 0.1872(4) 0.6165(3) 0.9360(2) 0.0333(7) Uani d . C 0
C9 1 -0.0066(6) 0.7898(3) 1.0257(3) 0.0544(10) Uani d . C 0
H91 1 -0.1375(6) 0.7819(3) 1.0303(3) 0.065 Uiso calc R H 0
H92 1 -0.0077(6) 0.8237(3) 1.0866(3) 0.065 Uiso calc R H 0
C10 1 0.0648(6) 0.8753(3) 0.9288(3) 0.0598(10) Uani d . C 0
H101 1 0.1825(6) 0.8983(3) 0.9320(3) 0.072 Uiso calc R H 0
H102 1 -0.0287(6) 0.9493(3) 0.9249(3) 0.072 Uiso calc R H 0
C11 1 0.1274(4) 0.6025(3) 1.1219(2) 0.0381(7) Uani d . C 0
H111 1 0.0759(4) 0.6402(3) 1.1813(2) 0.046 Uiso calc R H 0
C12 1 0.2191(4) 0.4801(3) 1.1340(2) 0.0340(7) Uani d . C 0
C13 1 0.2818(4) 0.4984(3) 0.9441(2) 0.0343(7) Uani d . C 0
H131 1 0.3363(4) 0.4643(3) 0.8829(2) 0.041 Uiso calc R H 0
C14 1 0.2996(4) 0.4269(3) 1.0414(2) 0.0332(7) Uani d . C 0
C15 1 0.3891(4) 0.3039(3) 1.0523(3) 0.0380(8) Uani d . C 0
H151 1 0.4465(4) 0.2671(3) 0.9927(3) 0.046 Uiso calc R H 0
C16 1 0.3919(4) 0.2385(3) 1.1503(3) 0.0429(8) Uani d . C 0
H161 1 0.4501(4) 0.1568(3) 1.1563(3) 0.051 Uiso calc R H 0
C17 1 0.3099(4) 0.2902(3) 1.2422(2) 0.0393(8) Uani d . C 0
C18 1 0.2267(4) 0.4113(3) 1.2344(2) 0.0366(7) Uani d . C 0
C19 1 0.3791(6) 0.0991(3) 1.3542(3) 0.0614(11) Uani d . C 0
H191 1 0.3643(6) 0.0667(3) 1.4279(3) 0.090(8) Uiso calc R H 0
H192 1 0.5126(6) 0.0884(3) 1.3179(3) 0.090(8) Uiso calc R H 0
H193 1 0.3116(6) 0.0562(3) 1.3252(3) 0.090(8) Uiso calc R H 0
C20 1 0.2591(7) 0.4940(4) 1.3760(3) 0.0789(13) Uani d . C 0
H201 1 0.1828(7) 0.5321(4) 1.4352(3) 0.132(11) Uiso calc R H 0
H202 1 0.3422(7) 0.5489(4) 1.3289(3) 0.132(11) Uiso calc R H 0
H203 1 0.3347(7) 0.4194(4) 1.4006(3) 0.132(11) Uiso calc R H 0
C21 1 0.2815(9) 0.2146(5) 0.6399(5) 0.114(2) Uani d . C 0
H211 1 0.2820(9) 0.2199(5) 0.5674(5) 0.199(19) Uiso calc R H 0
H212 1 0.1579(9) 0.1998(5) 0.6846(5) 0.199(19) Uiso calc R H 0
H213 1 0.3775(9) 0.1485(5) 0.6580(5) 0.199(19) Uiso calc R H 0
C22 1 0.3228(6) 0.3304(4) 0.6550(3) 0.0690(11) Uani d . C 0
H221 1 0.4465(6) 0.3458(4) 0.6085(3) 0.083 Uiso calc R H 0
H222 1 0.2269(6) 0.3971(4) 0.6352(3) 0.083 Uiso calc R H 0
loop_
_atom_type_symbol
_atom_type_description
_atom_type_scat_source
_atom_type_scat_dispersion_real
_atom_type_scat_dispersion_imag
C C 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0033 0.001
H H 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0000 0.000
N N 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0061 0.003
Cl Cl 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.1484 0.1
O O 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0106 0.006
loop_
_geom_angle_atom_site_label_1
_geom_angle_atom_site_label_2
_geom_angle_atom_site_label_3
_geom_angle
C11 N1 C8 122.6(3)
C11 N1 C9 118.1(3)
C8 N1 C9 119.1(2)
C3 O1 C1 104.1(3)
C2 O2 C1 104.2(3)
C18 O3 C20 116.0(3)
C17 O4 C19 118.7(3)
C22 O5 H5 109.(3)
O1 C1 O2 108.0(3)
C4 C2 O2 127.7(3)
C4 C2 C3 122.4(3)
O2 C2 C3 109.9(3)
C6 C3 O1 128.6(3)
C6 C3 C2 121.7(3)
O1 C3 C2 109.7(3)
C2 C4 C5 117.1(3)
C7 C5 C4 121.2(3)
C7 C5 C10 118.8(3)
C4 C5 C10 119.9(3)
C3 C6 C7 117.5(3)
C5 C7 C6 120.1(3)
C5 C7 C8 120.7(3)
C6 C7 C8 119.3(3)
C13 C8 N1 117.1(3)
C13 C8 C7 124.3(3)
N1 C8 C7 118.6(3)
C10 C9 N1 112.7(3)
C9 C10 C5 112.2(3)
N1 C11 C12 122.1(3)
C11 C12 C18 121.7(3)
C11 C12 C14 117.3(3)
C18 C12 C14 121.0(3)
C8 C13 C14 122.4(3)
C13 C14 C15 123.5(3)
C13 C14 C12 118.5(3)
C15 C14 C12 118.0(3)
C16 C15 C14 120.0(3)
C15 C16 C17 122.2(3)
O4 C17 C18 116.5(3)
O4 C17 C16 124.0(3)
C18 C17 C16 119.5(3)
C17 C18 O3 122.5(3)
C17 C18 C12 119.3(3)
O3 C18 C12 118.0(3)
O5 C22 C21 112.7(4)
loop_
_geom_bond_atom_site_label_1
_geom_bond_atom_site_label_2
_geom_bond_site_symmetry_2
_geom_bond_distance
_geom_bond_publ_flag
N1 C11 . 1.316(4) ?
N1 C8 . 1.393(3) ?
N1 C9 . 1.491(4) ?
O1 C3 . 1.375(4) ?
O1 C1 . 1.423(4) ?
O2 C2 . 1.369(4) ?
O2 C1 . 1.428(5) ?
O3 C18 . 1.375(3) ?
O3 C20 . 1.425(5) ?
O4 C17 . 1.360(4) ?
O4 C19 . 1.428(4) ?
O5 C22 . 1.411(5) ?
O5 H5 . 0.87(4) ?
C1 H11 . 0.97 ?
C1 H12 . 0.97 ?
C2 C4 . 1.359(5) ?
C2 C3 . 1.377(5) ?
C3 C6 . 1.350(4) ?
C4 C5 . 1.392(5) ?
C4 H41 . 0.93 ?
C5 C7 . 1.386(4) ?
C5 C10 . 1.502(5) ?
C6 C7 . 1.413(4) ?
C6 H61 . 0.93 ?
C7 C8 . 1.475(4) ?
C8 C13 . 1.369(4) ?
C9 C10 . 1.473(5) ?
C9 H91 . 0.97 ?
C9 H92 . 0.97 ?
C10 H101 . 0.97 ?
C10 H102 . 0.97 ?
C11 C12 . 1.405(4) ?
C11 H111 . 0.93 ?
C12 C18 . 1.411(4) ?
C12 C14 . 1.415(4) ?
C13 C14 . 1.403(4) ?
C13 H131 . 0.93 ?
C14 C15 . 1.405(4) ?
C15 C16 . 1.365(4) ?
C15 H151 . 0.93 ?
C16 C17 . 1.400(4) ?
C16 H161 . 0.93 ?
C17 C18 . 1.372(4) ?
C19 H191 . 0.96 ?
C19 H192 . 0.96 ?
C19 H193 . 0.96 ?
C20 H201 . 0.96 ?
C20 H202 . 0.96 ?
C20 H203 . 0.96 ?
C21 C22 . 1.465(6) ?
C21 H211 . 0.96 ?
C21 H212 . 0.96 ?
C21 H213 . 0.96 ?
C22 H221 . 0.97 ?
C22 H222 . 0.97 ?
Cl1 O5 2_657 3.145(4) y
Cl1 O6 . 3.315(4) y
Cl1 O6 2_657 3.043(4) y
O6 O6 2_657 1.987(4) y
loop_
_cod_related_entry_id
_cod_related_entry_database
_cod_related_entry_code
1 PubChem 139054327