#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/36/2003614.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2003614 loop_ _publ_author_name 'Pom\'es Hern\'andez, R.' 'Duque Rodr\'iguez, J.' 'Garc\'ia Trimi\~no, M. I.' 'Novoa de Armas, H.' 'Toscano, R. A.' _publ_section_title ; 6-Methylamino-4-methylthio-5-nitro-2-phenylpyrimidine ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1392 _journal_page_last 1394 _journal_paper_doi 10.1107/S0108270194013831 _journal_volume 51 _journal_year 1995 _chemical_compound_source 'slow recrystallization from DMF' _chemical_formula_sum 'C12 H12 N4 O2 S' _chemical_formula_weight 276.32 _space_group_IT_number 2 _space_group_name_Hall '-P 1' _space_group_name_H-M_alt 'P -1' _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_type_scat_source IntTabIV _cell_angle_alpha 109.36(2) _cell_angle_beta 96.47(2) _cell_angle_gamma 90.56(2) _cell_formula_units_Z 2 _cell_length_a 5.335(2) _cell_length_b 10.625(2) _cell_length_c 11.886(2) _cell_measurement_reflns_used 35 _cell_measurement_temperature 298 _cell_measurement_theta_max 21 _cell_measurement_theta_min 15 _cell_volume 630.8(3) _computing_cell_refinement 'SHELXTL-Plus (Sheldrick, 1990)' _computing_data_collection 'Siemens data collection software XSCANS (1982)' _computing_data_reduction SHELXTL-Plus _computing_structure_solution SHELXTL-Plus _diffrn_measurement_device 'Siemens P3/PC' _diffrn_measurement_method 2\q/\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.027 _diffrn_reflns_limit_h_max 6 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -11 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min -14 _diffrn_reflns_number 2429 _diffrn_reflns_theta_max 50 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 100 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.26 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.45 _exptl_crystal_density_meas 1.43 _exptl_crystal_density_method 'picnometric method.' _exptl_crystal_description 'thin rectangular plate' _exptl_crystal_size_max 0.6 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.1 _refine_diff_density_max 0.11 _refine_diff_density_min -0.12 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.11 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 210 _refine_ls_number_reflns 1072 _refine_ls_R_factor_obs 0.061 _refine_ls_shift/esd_max 0.069 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(F)+0.001481F^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_obs 0.068 _reflns_number_observed 1072 _reflns_number_total 2173 _reflns_observed_criterion I>3\s(I) _cod_data_source_file ab1125.cif _cod_data_source_block ab1125a _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value '1/[\s^2^(F)+0.001481F^2^]' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(F)+0.001481F^2^]'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 630.81 _cod_database_code 2003614 loop_ _space_group_symop_id _space_group_symop_operation_xyz 1 x,y,z 2 -x,-y,-z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv S(1) .3012(4) .8984(2) .5726(2) .052(1) O(1) .8712(10) .9989(5) .8839(5) .072(2) O(2) .7038(9) 1.0157(5) .7169(4) .068(2) N(1) .3120(10) .7212(5) .8686(5) .040(2) N(2) .7037(11) .9672(5) .7970(5) .049(3) N(3) .1334(10) .7424(5) .6822(4) .042(2) N(4) .6675(10) .8399(5) .9783(5) .046(2) C(2) .1416(11) .6904(6) .7719(6) .037(3) C(4) .3136(12) .8340(6) .6909(6) .039(3) C(5) .5085(12) .8732(6) .7903(6) .040(3) C(6) .4960(11) .8126(6) .8806(6) .037(3) C(7) -.0534(12) .5836(6) .7564(6) .041(3) C(8) -.0352(13) .5062(7) .8307(6) .049(3) C(9) -.2156(14) .4068(8) .8157(7) .059(3) C(10) -.4204(14) .3835(8) .7281(6) .057(3) C(11) -.4390(13) .4595(8) .6545(6) .053(3) C(12) -.2630(13) .5587(7) .6670(6) .047(3) C(13) .0232(14) .8108(9) .4806(7) .057(3) C(14) .6569(16) .7707(10) 1.0641(8) .061(4) H(1) .772(13) .901(7) .981(6) .07(1) H(2) .117(12) .524(6) .891(6) .07(1) H(3) -.199(12) .352(6) .859(6) .07(1) H(4) -.541(13) .310(6) .709(6) .07(1) H(5) -.586(12) .446(6) .605(6) .07(1) H(6) -.261(13) .614(7) .627(6) .07(1) H(7) -.129(13) .829(7) .510(6) .07(1) H(8) .004(12) .844(6) .415(6) .07(1) H(9) .049(13) .715(7) .458(6) .07(1) H(10) .527(13) .799(7) 1.097(6) .07(1) H(11) .777(13) .804(7) 1.119(6) .07(1) H(12) .720(12) .686(7) 1.044(6) .07(1) loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C(4) S(1) C(13) 100.7(4) yes O(1) N(2) O(2) 121.3(6) yes O(2) N(2) C(5) 119.3(5) yes C(6) N(4) C(14) 121.5(6) yes N(1) C(2) C(7) 117.5(6) yes S(1) C(4) N(3) 116.3(4) yes N(3) C(4) C(5) 121.0(6) yes N(2) C(5) C(6) 122.4(5) yes N(1) C(6) N(4) 116.6(7) yes N(4) C(6) C(5) 123.1(6) yes C(2) C(7) C(12) 121.1(7) yes C(7) C(8) C(9) 120.5(6) yes C(9) C(10) C(11) 118.9(7) yes C(7) C(12) C(11) 119.8(8) yes C(2) N(1) C(6) 118.1(6) yes O(1) N(2) C(5) 119.4(7) yes C(2) N(3) C(4) 117.1(5) yes N(1) C(2) N(3) 126.6(6) yes N(3) C(2) C(7) 115.8(5) yes S(1) C(4) C(5) 122.7(5) yes N(2) C(5) C(4) 120.7(7) yes C(4) C(5) C(6) 116.9(6) yes N(1) C(6) C(5) 120.2(5) yes C(2) C(7) C(8) 120.6(6) yes C(8) C(7) C(12) 118.3(6) yes C(8) C(9) C(10) 120.8(8) yes C(10) C(11) C(12) 121.7(7) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S(1) C(4) 1.751(8) yes O(1) N(2) 1.238(7) yes N(1) C(2) 1.328(8) yes N(2) C(5) 1.412(9) yes N(3) C(4) 1.332(8) yes N(4) C(14) 1.450(10) yes C(4) C(5) 1.428(8) yes C(7) C(8) 1.390(10) yes C(8) C(9) 1.370(10) yes C(10) C(11) 1.370(10) yes S(1) C(13) 1.788(7) yes O(2) N(2) 1.224(9) yes N(1) C(6) 1.336(8) yes N(3) C(2) 1.350(10) yes N(4) C(6) 1.342(8) yes C(2) C(7) 1.483(9) yes C(5) C(6) 1.430(10) yes C(7) C(12) 1.410(9) yes C(9) C(10) 1.380(10) yes C(11) C(12) 1.360(10) yes H(1) N(4) 0.84(7) no H(2) C(8) 0.99(6) no H(3) C(9) 0.90(8) no H(4) C(10) 0.95(7) no H(5) C(11) 0.91(6) no H(6) C(12) 0.86(8) no H(7) C(13) 0.92(8) no H(8) C(13) 0.95(8) no H(9) C(13) 0.97(7) no H(10) C(14) 0.84(7) no H(11) C(14) 0.85(6) no H(12) C(14) 0.93(7) no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C13 S1 C4 N3 1.3(0.5) no C4 S1 C13 H8 178.7(4.0) no C6 N1 C2 C7 176.8(0.5) no O1 N2 C5 C4 -179.6(0.5) no O2 N2 C5 C6 -179.9(0.5) no C2 N3 C4 S1 179.3(0.4) no H1 N4 C6 C5 4.8(5.1) no H1 N4 C14 H10 109.9(7.5) no C6 N4 C14 H10 -68.8(4.4) no N1 C2 C7 C8 -9.2(0.9) no N3 C2 C7 C12 -12.7(0.8) no N3 C4 C5 N2 177.9(0.5) no N2 C5 C6 N4 0.0(0.9) no C2 C7 C8 H2 -2.4(4.2) no C12 C7 C8 C9 1.0(0.9) no C8 C7 C12 C11 -0.9(0.9) no C7 C8 C9 C10 -1.2(1.0) no C8 C9 C10 H4 173.3(4.7) no H3 C9 C10 C11 -175.2(4.5) no H4 C10 C11 H5 14.0(5.9 no C10 C11 C12 H6 -177.2(5.4) no C13 S1 C4 C5 179.6(0.5) no C4 S1 C13 H9 -59.1(4.7) no C2 N1 C6 N4 -178.9(0.5) no O1 N2 C5 C6 0.0(0.9) no C4 N3 C2 N1 0.0(0.9) no C2 N3 C4 C5 0.9(0.8) no C14 N4 C6 N1 1.7(0.9) no H1 N4 C14 H11 0.6(7.9) no C6 N4 C14 H11 -178.1(5.0) no N1 C2 C7 C12 170.2(0.6) no S1 C4 C5 N2 -0.3(0.8) no N3 C4 C5 C6 -1.7(0.8) no C4 C5 C6 N1 1.7(0.8) no C2 C7 C8 C9 -179.6(0.6) no C2 C7 C12 C11 179.7(0.6) no C8 C7 C12 H6 177.6(4.8) no H2 C8 C9 H3 -1.9(6.5) no C8 C9 C10 C11 1.3(1.1) no C9 C10 C11 H5 -173.4(4.1) no H4 C10 C11 C12 -173.8(4.2) no H5 C11 C12 C7 172.6(4.6) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 101928760