#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/36/2003680.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2003680 loop_ _publ_author_name 'Kraus, G. A.' 'Su, Q.' 'Young, Jnr, V. G.' _publ_section_title ;Construction of the Tetracyclic Skeleton of Leucothol A. 1,2,4a,5,6,7,8,9,10,10a,11,11a-Dodecahydro-11-hydroxy-11-methyl-7-phenylthiomethyl-5aH-5a,8-methanocyclohepta[b]naphthalen-10-one ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1366 _journal_page_last 1368 _journal_paper_doi 10.1107/S0108270194014071 _journal_volume 51 _journal_year 1995 _chemical_formula_sum 'C24 H30 O2 S' _chemical_formula_weight 382.54 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 93.84(1) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 5.976(1) _cell_length_b 13.146(1) _cell_length_c 25.883(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 213(1) _cell_measurement_theta_max 26.9 _cell_measurement_theta_min 20.9 _cell_volume 2028.8(4) _computing_cell_refinement 'SHELXTL-Plus (Sheldrick, 1990)' _computing_data_collection 'SHELXTL-Plus (Sheldrick, 1990)' _computing_data_reduction 'SHELXTL-Plus (Sheldrick, 1990)' _computing_molecular_graphics 'SHELXTL-Plus (Sheldrick, 1990)' _computing_publication_material 'SHELXTL-Plus (Sheldrick, 1990)' _computing_structure_refinement 'SHELXL-93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXTL-Plus (Sheldrick, 1990)' _diffrn_ambient_temperature 213(2) _diffrn_measurement_device 'Siemens P4RA' _diffrn_measurement_method 'Profile fitted 2\q/\w scans (Clegg, 1981)' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'rotating anode' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54178 _diffrn_reflns_av_R_equivalents 0.0445 _diffrn_reflns_av_sigmaI/netI 0.0428 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -6 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -14 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min -28 _diffrn_reflns_number 5926 _diffrn_reflns_theta_max 56.86 _diffrn_reflns_theta_min 3.42 _diffrn_standards_decay_% 4.5 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.529 _exptl_absorpt_correction_T_max 0.9448 _exptl_absorpt_correction_T_min 0.6938 _exptl_absorpt_correction_type 'semi-empirical (SHELXTL-Plus; Sheldrick, 1990)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.252 _exptl_crystal_description monoclinic _exptl_crystal_F_000 824 _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.45 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.403 _refine_diff_density_min -0.307 _refine_ls_extinction_coef 0.0018(2) _refine_ls_extinction_method 'SHELXL93 (Sheldrick, 1993)' _refine_ls_goodness_of_fit_all 1.044 _refine_ls_goodness_of_fit_obs 1.080 _refine_ls_hydrogen_treatment 'riding isotropic' _refine_ls_matrix_type full _refine_ls_number_parameters 357 _refine_ls_number_reflns 2736 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.044 _refine_ls_restrained_S_obs 1.080 _refine_ls_R_factor_all 0.0460 _refine_ls_R_factor_obs 0.0399 _refine_ls_shift/esd_max 0.001 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details w=1/[\s^2^(Fo^2^)+(0.0403P)^2^+0.9025P] _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.1000 _refine_ls_wR_factor_obs 0.0957 _reflns_number_observed 2389 _reflns_number_total 2736 _reflns_observed_criterion >2sigma(I) _cod_data_source_file ka1094.cif _cod_data_source_block str1080 _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w=1/[\s^2^(Fo^2^)+(0.0403P)^2^+0.9025P]' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w=1/[\s^2^(Fo^2^)+(0.0403P)^2^+0.9025P]'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2003680 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_22 _atom_site_aniso_U_23 _atom_site_aniso_U_33 S 0.0974(5) 0.0041(3) 0.0066(3) 0.0338(3) 0.0059(2) 0.0458(4) C1 0.0487(13) 0.0033(10) -0.0077(9) 0.0205(10) -0.0062(8) 0.0399(11) O1 0.0720(11) 0.0263(8) -0.0102(8) 0.0369(8) -0.0021(7) 0.0515(9) C2 0.061(2) -0.0100(11) -0.0026(12) 0.0278(11) 0.0081(10) 0.0519(14) C3 0.0381(12) -0.0054(10) 0.0134(11) 0.0389(12) 0.0101(10) 0.0521(13) C4 0.0297(11) 0.0030(10) 0.0128(10) 0.0405(12) 0.0063(11) 0.0556(14) C5 0.0276(10) 0.0007(8) 0.0083(8) 0.0211(9) 0.0015(8) 0.0433(11) C6 0.0236(10) 0.0012(8) -0.0008(8) 0.0218(9) -0.0020(8) 0.0397(11) C7 0.0338(11) 0.0052(8) -0.0043(9) 0.0230(10) -0.0041(8) 0.0423(11) C15 0.0527(14) -0.0086(10) -0.0140(11) 0.0272(11) -0.0019(10) 0.0563(14) O2 0.0554(10) 0.0194(7) -0.0017(7) 0.0367(9) -0.0089(7) 0.0455(9) C8 0.0329(10) -0.0007(9) -0.0082(9) 0.0281(10) -0.0025(9) 0.0364(11) C9 0.0304(11) 0.0013(9) -0.0024(10) 0.0279(10) 0.0090(9) 0.0541(13) C10 0.0391(12) 0.0072(9) 0.0129(10) 0.0209(10) 0.0016(9) 0.0492(12) C11 0.0369(12) -0.0017(10) 0.0012(9) 0.0479(13) -0.0055(10) 0.0321(11) C12 0.065(2) -0.0163(14) 0.0016(12) 0.061(2) 0.0020(11) 0.0332(12) C14 0.0521(14) 0.0038(11) -0.0130(13) 0.0308(12) 0.0076(11) 0.061(2) C13 0.073(2) -0.0156(12) -0.0164(13) 0.0397(13) 0.0084(11) 0.0421(13) C16 0.0433(13) -0.0046(9) 0.0146(10) 0.0263(11) -0.0057(9) 0.0410(12) C17 0.0428(12) 0.0029(9) 0.0155(10) 0.0288(11) 0.0009(9) 0.0447(12) C18 0.0553(14) 0.0038(12) 0.0061(11) 0.0399(13) -0.0014(11) 0.0457(13) C19 0.0580(14) -0.0017(11) 0.0007(10) 0.0399(12) 0.0094(9) 0.0335(11) C20 0.066(2) -0.0015(12) 0.0117(13) 0.0424(14) 0.0025(11) 0.0549(14) C21 0.099(2) 0.012(2) 0.008(2) 0.047(2) -0.0006(13) 0.059(2) C22 0.094(2) 0.047(2) 0.014(2) 0.090(2) 0.0138(15) 0.0416(15) C23 0.065(2) 0.012(2) 0.0123(15) 0.099(3) 0.029(2) 0.060(2) C24 0.068(2) -0.0097(15) 0.0028(13) 0.066(2) 0.0142(13) 0.0525(15) loop_ _atom_site_label _atom_site_occupancy _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_type_symbol S 1 0.16288(13) 0.31442(4) 0.29855(2) 0.0589(3) Uani d . S C1 1 0.0904(4) 0.35986(14) 0.46657(8) 0.0368(5) Uani d . C O1 1 -0.0751(3) 0.41436(11) 0.46247(6) 0.0541(5) Uani d . O C2 1 0.2827(4) 0.3757(2) 0.43266(10) 0.0471(6) Uani d . C H2A 1 0.3993(42) 0.4152(19) 0.4536(10) 0.057(7) Uiso d . H H2B 1 0.2217(39) 0.4166(18) 0.4033(9) 0.051(6) Uiso d . H C3 1 0.3921(4) 0.2759(2) 0.41721(9) 0.0426(5) Uani d . C H3A 1 0.5225(40) 0.2890(17) 0.3969(9) 0.050(6) Uiso d . H C4 1 0.4675(4) 0.2183(2) 0.46662(9) 0.0415(5) Uani d . C H4A 1 0.5543(36) 0.2603(17) 0.4931(8) 0.042(6) Uiso d . H H4B 1 0.5512(37) 0.1603(18) 0.4581(8) 0.044(6) Uiso d . H C5 1 0.2419(3) 0.18320(13) 0.48588(8) 0.0304(5) Uani d . C C6 1 0.1060(3) 0.27392(14) 0.50571(7) 0.0285(4) Uani d . C H6A 1 -0.0451(34) 0.2520(14) 0.5081(7) 0.026(5) Uiso d . H C7 1 0.1736(3) 0.31403(14) 0.56165(8) 0.0334(5) Uani d . C C15 1 0.3874(4) 0.3782(2) 0.56617(9) 0.0462(6) Uani d . C H15A 1 0.5152(5) 0.3358(3) 0.5596(5) 0.042(6) Uiso calc R H H15B 1 0.4075(12) 0.4065(8) 0.6008(2) 0.067(8) Uiso calc R H H15C 1 0.3752(10) 0.4330(6) 0.5411(4) 0.062(7) Uiso calc R H O2 1 -0.0071(3) 0.37624(12) 0.57724(6) 0.0461(4) Uani d . O H2C 1 0.0108(51) 0.4390(25) 0.5646(11) 0.082(10) Uiso d . H C8 1 0.1944(3) 0.22451(15) 0.59982(8) 0.0329(5) Uani d . C H8A 1 0.2708(37) 0.2512(17) 0.6321(9) 0.044(6) Uiso d . H C9 1 0.3458(3) 0.14004(15) 0.58103(9) 0.0377(5) Uani d . C H9A 1 0.5031(38) 0.1685(16) 0.5783(8) 0.043(6) Uiso d . H C10 1 0.2612(4) 0.10084(15) 0.52745(8) 0.0360(5) Uani d . C H10A 1 0.3633(37) 0.0482(17) 0.5161(8) 0.046(6) Uiso d . H H10B 1 0.1103(37) 0.0686(15) 0.5299(8) 0.036(5) Uiso d . H C11 1 -0.0282(4) 0.1786(2) 0.61416(8) 0.0390(5) Uani d . C H11A 1 -0.0989(34) 0.1390(16) 0.5837(8) 0.038(5) Uiso d . H H11B 1 -0.1254(38) 0.2332(18) 0.6219(9) 0.046(6) Uiso d . H C12 1 0.0113(5) 0.1046(2) 0.65935(9) 0.0531(6) Uani d . C H12A 1 -0.1187(45) 0.0590(20) 0.6630(10) 0.063(7) Uiso d . H H12B 1 0.0265(41) 0.1423(20) 0.6932(10) 0.064(7) Uiso d . H C14 1 0.3615(4) 0.0547(2) 0.62013(10) 0.0487(6) Uani d . C H14A 1 0.4943(41) 0.0116(18) 0.6181(9) 0.054(7) Uiso d . H C13 1 0.2133(5) 0.0399(2) 0.65477(9) 0.0525(7) Uani d . C H13A 1 0.2288(46) -0.0157(22) 0.6773(11) 0.072(8) Uiso d . H C16 1 0.1232(4) 0.1431(2) 0.43505(8) 0.0363(5) Uani d . C H16A 1 -0.0374(41) 0.1546(17) 0.4345(8) 0.045(6) Uiso d . H H16B 1 0.1410(36) 0.0682(18) 0.4313(8) 0.045(6) Uiso d . H C17 1 0.2259(4) 0.20086(15) 0.38970(8) 0.0382(5) Uani d . C H17A 1 0.3167(35) 0.1533(16) 0.3708(8) 0.039(5) Uiso d . H C18 1 0.0498(4) 0.2456(2) 0.35134(9) 0.0468(6) Uani d . C H18A 1 -0.0480(42) 0.1908(20) 0.3367(9) 0.056(7) Uiso d . H H18B 1 -0.0468(41) 0.2977(19) 0.3679(9) 0.058(7) Uiso d . H C19 1 0.3093(4) 0.2189(2) 0.26625(8) 0.0439(6) Uani d . C C20 1 0.2230(5) 0.1225(2) 0.25692(10) 0.0540(6) Uani d . C H20A 1 0.0780(46) 0.1040(20) 0.2689(10) 0.065(8) Uiso d . H C21 1 0.3406(6) 0.0529(2) 0.22955(11) 0.0684(8) Uani d . C H21A 1 0.2738(47) -0.0163(23) 0.2238(11) 0.075(8) Uiso d . H C22 1 0.5446(6) 0.0798(3) 0.21097(10) 0.0750(10) Uani d . C H22A 1 0.6249(52) 0.0345(25) 0.1940(12) 0.087(10) Uiso d . H C23 1 0.6272(6) 0.1755(3) 0.21977(12) 0.0744(9) Uani d . C H23A 1 0.7738(58) 0.1939(24) 0.2081(12) 0.096(11) Uiso d . H C24 1 0.5130(5) 0.2446(2) 0.24764(10) 0.0622(7) Uani d . C H24A 1 0.5685(54) 0.3167(26) 0.2541(12) 0.093(10) Uiso d . H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_source _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag C C 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0181 0.009 H H 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0000 0.000 O O 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0492 0.032 S S 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.3331 0.556 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C19 S C18 102.93(10) yes O1 C1 C2 120.9(2) yes O1 C1 C6 120.6(2) yes C2 C1 C6 118.5(2) yes C1 C2 C3 113.0(2) yes C1 C2 H2A 106.7(13) ? C3 C2 H2A 107.1(14) ? C1 C2 H2B 105.6(14) ? C3 C2 H2B 114.2(13) ? H2A C2 H2B 110.2(19) ? C4 C3 C2 108.2(2) yes C4 C3 C17 102.4(2) yes C2 C3 C17 113.3(2) yes C4 C3 H3A 109.5(14) ? C2 C3 H3A 110.9(13) ? C17 C3 H3A 112.0(13) ? C3 C4 C5 101.8(2) yes C3 C4 H4A 114.3(13) ? C5 C4 H4A 111.7(12) ? C3 C4 H4B 109.6(13) ? C5 C4 H4B 108.8(13) ? H4A C4 H4B 110.3(18) ? C10 C5 C4 114.5(2) yes C10 C5 C16 111.6(2) yes C4 C5 C16 100.9(2) yes C10 C5 C6 109.2(2) yes C4 C5 C6 111.5(2) yes C16 C5 C6 108.9(2) yes C1 C6 C5 111.2(2) yes C1 C6 C7 111.53(15) yes C5 C6 C7 117.1(2) yes C1 C6 H6A 104.6(11) ? C5 C6 H6A 108.0(11) ? C7 C6 H6A 103.2(11) ? O2 C7 C15 107.8(2) yes O2 C7 C8 106.6(2) yes C15 C7 C8 110.0(2) yes O2 C7 C6 107.4(2) yes C15 C7 C6 114.7(2) yes C8 C7 C6 109.92(15) yes C7 C15 H15A 109.47(11) ? C7 C15 H15B 109.47(12) ? H15A C15 H15B 109.5 ? C7 C15 H15C 109.47(11) ? H15A C15 H15C 109.5 ? H15B C15 H15C 109.5 ? C7 O2 H2C 108.(2) ? C11 C8 C9 109.4(2) yes C11 C8 C7 115.1(2) yes C9 C8 C7 112.0(2) yes C11 C8 H8A 107.1(12) ? C9 C8 H8A 106.0(13) ? C7 C8 H8A 106.5(13) ? C14 C9 C8 109.7(2) yes C14 C9 C10 111.0(2) yes C8 C9 C10 111.4(2) yes C14 C9 H9A 107.6(12) ? C8 C9 H9A 108.9(12) ? C10 C9 H9A 108.1(12) ? C5 C10 C9 113.8(2) yes C5 C10 H10A 108.0(12) ? C9 C10 H10A 109.5(13) ? C5 C10 H10B 108.5(12) ? C9 C10 H10B 109.2(11) ? H10A C10 H10B 107.5(17) ? C12 C11 C8 110.2(2) yes C12 C11 H11A 107.7(12) ? C8 C11 H11A 109.8(11) ? C12 C11 H11B 112.5(13) ? C8 C11 H11B 107.8(13) ? H11A C11 H11B 108.8(18) ? C13 C12 C11 112.8(2) yes C13 C12 H12A 108.0(15) ? C11 C12 H12A 112.1(15) ? C13 C12 H12B 109.0(15) ? C11 C12 H12B 110.6(15) ? H12A C12 H12B 104.(2) ? C13 C14 C9 123.5(2) yes C13 C14 H14A 122.4(14) ? C9 C14 H14A 114.0(14) ? C14 C13 C12 123.8(2) yes C14 C13 H13A 119.8(17) ? C12 C13 H13A 116.3(17) ? C5 C16 C17 107.1(2) yes C5 C16 H16A 110.9(13) ? C17 C16 H16A 110.6(13) ? C5 C16 H16B 112.0(13) ? C17 C16 H16B 111.0(12) ? H16A C16 H16B 105.3(18) ? C18 C17 C3 116.9(2) yes C18 C17 C16 113.0(2) yes C3 C17 C16 103.8(2) yes C18 C17 H17A 107.7(12) ? C3 C17 H17A 106.2(12) ? C16 C17 H17A 109.0(12) ? C17 C18 S 114.3(2) yes C17 C18 H18A 109.6(14) ? S C18 H18A 108.4(14) ? C17 C18 H18B 112.2(14) ? S C18 H18B 103.5(13) ? H18A C18 H18B 109.(2) ? C24 C19 C20 119.3(2) yes C24 C19 S 117.8(2) yes C20 C19 S 122.8(2) yes C21 C20 C19 120.1(3) yes C21 C20 H20A 119.6(16) ? C19 C20 H20A 120.3(16) ? C20 C21 C22 120.0(3) yes C20 C21 H21A 118.0(17) ? C22 C21 H21A 122.1(16) ? C23 C22 C21 119.6(3) yes C23 C22 H22A 120.(2) ? C21 C22 H22A 121.(2) ? C22 C23 C24 120.8(3) yes C22 C23 H23A 119.9(19) ? C24 C23 H23A 119.(2) ? C23 C24 C19 120.2(3) yes C23 C24 H24A 122.5(18) ? C19 C24 H24A 117.2(18) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S C19 1.771(2) yes S C18 1.807(2) yes C1 O1 1.220(2) yes C1 C2 1.506(3) yes C1 C6 1.516(3) yes C2 C3 1.531(3) yes C2 H2A 1.00(3) ? C2 H2B 0.98(2) ? C3 C4 1.528(3) yes C3 C17 1.540(3) yes C3 H3A 0.98(2) ? C4 C5 1.539(3) yes C4 H4A 1.00(2) ? C4 H4B 0.95(2) ? C5 C10 1.525(3) yes C5 C16 1.545(3) yes C5 C6 1.550(2) yes C6 C7 1.568(3) yes C6 H6A 0.95(2) ? C7 O2 1.434(2) yes C7 C15 1.529(3) yes C7 C8 1.536(3) yes C15 H15A 0.97 ? C15 H15B 0.97 ? C15 H15C 0.97 ? O2 H2C 0.90(3) ? C8 C11 1.529(3) yes C8 C9 1.532(3) yes C8 H8A 0.99(2) ? C9 C14 1.510(3) yes C9 C10 1.533(3) yes C9 H9A 1.02(2) ? C10 H10A 0.98(2) ? C10 H10B 1.00(2) ? C11 C12 1.528(3) yes C11 H11A 1.01(2) ? C11 H11B 0.95(2) ? C12 C13 1.487(4) yes C12 H12A 0.99(3) ? C12 H12B 1.01(3) ? C14 C13 1.316(4) yes C14 H14A 0.98(2) ? C13 H13A 0.94(3) ? C16 C17 1.558(3) yes C16 H16A 0.97(2) ? C16 H16B 1.00(2) ? C17 C18 1.516(3) yes C17 H17A 0.98(2) ? C18 H18A 0.99(3) ? C18 H18B 1.01(3) ? C19 C24 1.381(4) yes C19 C20 1.383(3) yes C20 C21 1.378(4) yes C20 H20A 0.97(3) ? C21 C22 1.386(4) yes C21 H21A 1.00(3) ? C22 C23 1.365(5) yes C22 H22A 0.90(3) ? C23 C24 1.370(4) yes C23 H23A 0.98(3) ? C24 H24A 1.01(3) ? loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 21138868 2 PubChem 139054379