#------------------------------------------------------------------------------ #$Date: 2015-04-02 12:22:18 +0100 (Thu, 02 Apr 2015) $ #$Revision: 134621 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/38/2003807.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2003807 loop_ _publ_author_name 'Mukherjee, M.' 'Mukherjee, A. K.' 'Pariya, C.' 'Ray Chaudhuri, N.' _publ_section_title ; [N-(3-Aminopropyl)-1,3-propanediamine]diaquasulfatonickel(II) Monohydrate, [Ni(SO~4~)(dpt)(H~2~O)~2~].H~2~O [dpt = NH~2~(CH~2~)~3~NH(CH~2~)~3~NH~2~] ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1543 _journal_page_last 1545 _journal_paper_doi 10.1107/S0108270195000813 _journal_volume 51 _journal_year 1995 _chemical_formula_sum 'C6 H23 N3 Ni O7 S' _chemical_formula_weight 340.04 _chemical_name_systematic ; Mono-[N-(3-aminopropyl)-1,3-propanediamine] diaquasulfatonickel(II) monohydrate ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _audit_creation_method SHELXL _cell_angle_alpha 74.53(3) _cell_angle_beta 74.15(3) _cell_angle_gamma 78.64(3) _cell_formula_units_Z 2 _cell_length_a 7.242(3) _cell_length_b 8.454(3) _cell_length_c 12.230(6) _cell_measurement_reflns_used 30 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 15 _cell_measurement_theta_min 7.5 _cell_volume 688.0(5) _computing_cell_refinement SHELXTL _computing_data_collection 'SHELXTL (Sheldrick, 1985)' _computing_data_reduction SHELXTL _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_publication_material 'SHELXL93 (Sheldrick, 1993)' _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1985)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device R3m/V _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0320 _diffrn_reflns_av_sigmaI/netI 0.0271 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 2135 _diffrn_reflns_theta_max 23.54 _diffrn_reflns_theta_min 1.78 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 100 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 1.591 _exptl_absorpt_correction_T_max 0.784 _exptl_absorpt_correction_T_min 0.653 _exptl_absorpt_correction_type 'empirical, \y scan' _exptl_crystal_colour 'light blue' _exptl_crystal_density_diffrn 1.642 _exptl_crystal_density_meas 1.63 _exptl_crystal_density_method 'method of flotation' _exptl_crystal_description parallelepiped _exptl_crystal_F_000 360 _exptl_crystal_size_max 0.44 _exptl_crystal_size_mid 0.24 _exptl_crystal_size_min 0.12 _refine_diff_density_max 0.238 _refine_diff_density_min -0.276 _refine_ls_extinction_coef none _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 0.944 _refine_ls_goodness_of_fit_obs 0.947 _refine_ls_hydrogen_treatment 'H atoms refined isotropically' _refine_ls_matrix_type full _refine_ls_number_parameters 255 _refine_ls_number_reflns 2044 _refine_ls_number_restraints 13 _refine_ls_restrained_S_all 1.201 _refine_ls_restrained_S_obs 0.953 _refine_ls_R_factor_all 0.0329 _refine_ls_R_factor_obs 0.0246 _refine_ls_shift/esd_max 0.411 _refine_ls_shift/esd_mean 0.055 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme ;calc w = 1/[\s^2^(Fo^2^) + (0.0316P)^2^ + 0.6850P] where P = (Fo^2^ + 2Fc^2^)/3 ; _refine_ls_wR_factor_all 0.0789 _refine_ls_wR_factor_obs 0.0579 _reflns_number_observed 1801 _reflns_number_total 2047 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file li1131.cif _[local]_cod_data_source_block aminopropyl _cod_database_code 2003807 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_22 _atom_site_aniso_U_23 _atom_site_aniso_U_33 Ni 0.0200(2) -0.00403(13) -0.00124(14) 0.0202(2) -0.00480(14) 0.0226(2) S 0.0179(3) -0.0042(3) -0.0003(3) 0.0250(4) -0.0070(3) 0.0297(4) O1 0.0217(10) -0.0036(8) -0.0013(8) 0.0323(11) -0.0021(8) 0.0281(10) O2 0.0206(10) -0.0089(9) 0.0071(9) 0.0466(13) -0.0189(10) 0.0464(13) O3 0.0324(12) -0.0077(9) 0.0021(10) 0.0261(11) -0.0112(10) 0.0619(15) O4 0.0304(11) -0.0085(10) -0.0091(9) 0.0516(13) -0.0098(10) 0.0332(11) O5 0.0229(11) -0.0012(10) -0.0031(9) 0.0352(13) -0.0096(10) 0.0391(12) O6 0.0298(12) -0.0143(10) -0.0040(9) 0.0402(13) -0.0034(10) 0.0273(11) O7 0.068(2) 0.0166(13) -0.0101(14) 0.0389(14) -0.0128(12) 0.051(2) N1 0.032(2) -0.0042(12) -0.0017(13) 0.0267(13) -0.0080(11) 0.037(2) N2 0.0228(13) -0.0024(11) -0.0017(11) 0.0344(14) -0.0107(11) 0.0275(13) N3 0.0246(14) -0.0055(11) -0.0014(12) 0.0255(13) -0.0051(11) 0.0354(15) C1 0.061(3) -0.013(2) -0.015(2) 0.029(2) -0.011(2) 0.065(2) C2 0.045(2) -0.012(2) -0.011(2) 0.039(2) -0.023(2) 0.062(2) C3 0.039(2) -0.006(2) -0.005(2) 0.046(2) -0.027(2) 0.047(2) C4 0.036(2) -0.008(2) 0.0008(14) 0.053(2) -0.0080(14) 0.024(2) C5 0.043(2) -0.003(2) -0.002(2) 0.050(2) 0.008(2) 0.028(2) C6 0.037(2) -0.0111(15) 0.0034(15) 0.029(2) 0.0028(14) 0.040(2) loop_ _atom_site_label _atom_site_occupancy _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_type_symbol Ni 1 0.19412(5) 0.06399(4) 0.28971(3) 0.02152(12) Uani d . Ni S 1 -0.25827(9) 0.26314(8) 0.30796(6) 0.0249(2) Uani d . S O1 1 -0.1116(3) 0.1365(2) 0.3590(2) 0.0293(4) Uani d . O O2 1 -0.4441(3) 0.2568(3) 0.3956(2) 0.0386(5) Uani d . O O3 1 -0.1964(3) 0.4264(2) 0.2800(2) 0.0420(5) Uani d . O O4 1 -0.2761(3) 0.2206(3) 0.2028(2) 0.0376(5) Uani d . O O5 1 0.4906(3) -0.0164(3) 0.2314(2) 0.0334(5) Uani d D O O6 1 0.2448(3) 0.0918(3) 0.4465(2) 0.0324(5) Uani d D O O7 1 0.4214(4) 0.3143(3) 0.6229(2) 0.0563(7) Uani d D O N1 1 0.1461(4) -0.1787(3) 0.3796(2) 0.0329(6) Uani d D N N2 1 0.1406(3) 0.0495(3) 0.1336(2) 0.0285(5) Uani d D N N3 1 0.2384(4) 0.3117(3) 0.2292(2) 0.0297(6) Uani d D N C1 1 0.1260(6) -0.3045(4) 0.3209(4) 0.0499(9) Uani d D C C2 1 0.0370(5) -0.2310(4) 0.2183(3) 0.0453(8) Uani d . C C3 1 0.1606(5) -0.1214(4) 0.1185(3) 0.0417(8) Uani d . C C4 1 0.2486(5) 0.1550(4) 0.0271(3) 0.0394(8) Uani d . C C5 1 0.2126(5) 0.3368(4) 0.0281(3) 0.0452(8) Uani d . C C6 1 0.3143(5) 0.3837(4) 0.1045(3) 0.0391(8) Uani d . C HN1A 1 0.2436(39) -0.2143(38) 0.4117(26) 0.038(9) Uiso d D H HN1B 1 0.0429(44) -0.1636(48) 0.4325(29) 0.067(13) Uiso d D H HN2A 1 0.0198(35) 0.0896(36) 0.1396(27) 0.036(9) Uiso d D H HN3A 1 0.3099(42) 0.3240(39) 0.2726(25) 0.040(9) Uiso d D H HN3B 1 0.1258(37) 0.3658(36) 0.2532(27) 0.040(9) Uiso d D H HC1A 1 0.2505(44) -0.3629(51) 0.3005(38) 0.085(15) Uiso d D H HC1B 1 0.0539(46) -0.3838(38) 0.3761(26) 0.054(10) Uiso d D H HC2A 1 0.0178(46) -0.3211(43) 0.1926(28) 0.045(9) Uiso d . H HC2B 1 -0.0892(48) -0.1680(40) 0.2464(27) 0.040(9) Uiso d . H HC3A 1 0.1278(46) -0.1121(39) 0.0448(29) 0.044(9) Uiso d . H HC3B 1 0.2946(49) -0.1621(39) 0.1097(26) 0.039(9) Uiso d . H HC4A 1 0.3873(48) 0.1151(38) 0.0255(25) 0.038(8) Uiso d . H HC4B 1 0.2148(46) 0.1341(40) -0.0414(30) 0.049(9) Uiso d . H HC5A 1 0.0682(54) 0.3733(42) 0.0508(29) 0.055(10) Uiso d . H HC5B 1 0.2611(45) 0.3929(39) -0.0513(30) 0.044(9) Uiso d . H HC6A 1 0.4503(46) 0.3411(36) 0.0862(25) 0.034(8) Uiso d . H HC6B 1 0.3083(44) 0.4988(43) 0.0905(27) 0.042(9) Uiso d . H HO5A 1 0.5617(53) 0.0542(44) 0.2294(35) 0.070(14) Uiso d D H HO5B 1 0.5254(57) -0.1107(38) 0.2754(32) 0.074(14) Uiso d D H HO6A 1 0.2322(54) 0.0075(38) 0.5073(26) 0.066(12) Uiso d D H HO6B 1 0.3485(40) 0.1291(41) 0.4359(29) 0.049(11) Uiso d D H HO7A 1 0.3549(52) 0.4031(38) 0.6391(34) 0.063(13) Uiso d D H HO7B 1 0.4371(62) 0.3267(52) 0.5512(24) 0.078(15) Uiso d D H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_source _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag C C 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0033 0.0016 H H 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0000 0.0000 N N 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0061 0.0033 O O 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.0106 0.0060 S S 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.1246 0.1234 Ni Ni 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' 0.3393 1.1124 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N3 Ni N2 93.49(10) yes N3 Ni N1 169.98(10) yes N2 Ni N1 96.22(10) yes N3 Ni O5 91.63(10) yes N2 Ni O5 90.81(9) yes N1 Ni O5 90.70(10) yes N3 Ni O6 83.87(10) yes N2 Ni O6 177.14(9) yes N1 Ni O6 86.37(10) yes O5 Ni O6 90.36(9) yes N3 Ni O1 90.69(9) yes N2 Ni O1 91.31(9) yes N1 Ni O1 86.62(10) yes O5 Ni O1 176.75(8) yes O6 Ni O1 87.63(8) yes O3 S O4 110.98(13) yes O3 S O2 110.59(12) yes O4 S O2 109.96(12) yes O3 S O1 109.21(12) yes O4 S O1 108.41(12) yes O2 S O1 107.59(12) yes S O1 Ni 131.76(11) yes Ni O5 HO5A 112.(3) no Ni O5 HO5B 111.(3) no HO5A O5 HO5B 109.(4) no Ni O6 HO6A 118.(2) no Ni O6 HO6B 113.(2) no HO6A O6 HO6B 110.(3) no HO7A O7 HO7B 106.(4) no C1 N1 Ni 122.7(2) yes C1 N1 HN1A 109.(2) no Ni N1 HN1A 103.(2) no C1 N1 HN1B 110.(3) no Ni N1 HN1B 103.(3) no HN1A N1 HN1B 109.(3) no C3 N2 C4 110.4(2) yes C3 N2 Ni 114.2(2) yes C4 N2 Ni 114.9(2) yes C3 N2 HN2A 107.(2) no C4 N2 HN2A 106.(2) no Ni N2 HN2A 104.(2) no C6 N3 Ni 122.0(2) yes C6 N3 HN3A 112.(2) no Ni N3 HN3A 104.(2) no C6 N3 HN3B 109.(2) no Ni N3 HN3B 104.(2) no HN3A N3 HN3B 105.(3) no N1 C1 C2 112.9(3) yes N1 C1 HC1A 107.(3) no C2 C1 HC1A 113.(3) no N1 C1 HC1B 109.(2) no C2 C1 HC1B 111.(2) no HC1A C1 HC1B 104.(3) no C1 C2 C3 114.0(3) yes C1 C2 HC2A 106.(2) no C3 C2 HC2A 109.(2) no C1 C2 HC2B 107.4(18) no C3 C2 HC2B 110.3(18) no HC2A C2 HC2B 110.(3) no N2 C3 C2 113.2(3) yes N2 C3 HC3A 106.4(19) no C2 C3 HC3A 111.7(19) no N2 C3 HC3B 105.5(19) no C2 C3 HC3B 111.8(19) no HC3A C3 HC3B 108.(3) no N2 C4 C5 113.9(3) yes N2 C4 HC4A 105.2(18) no C5 C4 HC4A 108.0(18) no N2 C4 HC4B 107.3(19) no C5 C4 HC4B 112.0(19) no HC4A C4 HC4B 110.(3) no C6 C5 C4 114.8(3) yes C6 C5 HC5A 110.3(19) no C4 C5 HC5A 109.5(19) no C6 C5 HC5B 108.3(19) no C4 C5 HC5B 105.3(19) no HC5A C5 HC5B 108.(3) no N3 C6 C5 111.8(3) yes N3 C6 HC6A 106.7(18) no C5 C6 HC6A 109.7(17) no N3 C6 HC6B 111.2(19) no C5 C6 HC6B 111.3(19) no HC6A C6 HC6B 106.(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Ni N3 2.084(2) yes Ni N2 2.088(2) yes Ni N1 2.099(3) yes Ni O5 2.104(2) yes Ni O6 2.127(2) yes Ni O1 2.171(2) yes S O3 1.460(2) yes S O4 1.468(2) yes S O2 1.474(2) yes S O1 1.491(2) yes O5 HO5A 0.85(3) no O5 HO5B 0.87(3) no O6 HO6A 0.88(3) no O6 HO6B 0.84(2) no O7 HO7A 0.85(3) no O7 HO7B 0.83(3) no N1 C1 1.481(4) yes N1 HN1A 0.87(2) no N1 HN1B 0.86(3) no N2 C3 1.479(4) yes N2 C4 1.483(4) yes N2 HN2A 0.86(2) no N3 C6 1.475(4) yes N3 HN3A 0.87(2) no N3 HN3B 0.87(2) no C1 C2 1.497(5) yes C1 HC1A 0.94(3) no C1 HC1B 0.94(2) no C2 C3 1.509(5) yes C2 HC2A 0.94(3) no C2 HC2B 0.99(3) no C3 HC3A 0.97(3) no C3 HC3B 0.95(3) no C4 C5 1.510(5) yes C4 HC4A 0.99(3) no C4 HC4B 1.00(3) no C5 C6 1.504(5) yes C5 HC5A 1.01(4) no C5 HC5B 0.96(3) no C6 HC6A 0.97(3) no C6 HC6B 0.94(3) no