#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/51/2005173.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2005173 loop_ _publ_author_name 'Dalhus, B.' 'G\"orbitz, C. H.' _publ_section_title ; DL-Norleucine, \b Form at 120K ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1761 _journal_page_last 1764 _journal_paper_doi 10.1107/S0108270196003642 _journal_volume 52 _journal_year 1996 _chemical_formula_sum 'C6 H13 N O2' _chemical_formula_weight 131.17 _chemical_name_systematic ; DL-Norleucine ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 91.37(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 31.067(5) _cell_length_b 4.7170(10) _cell_length_c 9.851(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 120(2) _cell_measurement_theta_max 20.2 _cell_measurement_theta_min 13.2 _cell_volume 1443.2(5) _diffrn_ambient_temperature 120(2) _diffrn_measurement_device 'Nicolet P3 diffractometer' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.0526 _diffrn_reflns_limit_h_max 52 _diffrn_reflns_limit_h_min -52 _diffrn_reflns_limit_k_max 8 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3794 _diffrn_reflns_theta_max 37.5 _diffrn_reflns_theta_min 2.0 _diffrn_standards_decay_% '< 2' _diffrn_standards_interval_count 96 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.090 _exptl_absorpt_correction_type none _exptl_crystal_colour Colourless _exptl_crystal_density_diffrn 1.207 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 576 _exptl_crystal_size_max 0.5 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.1 _refine_diff_density_max 0.388 _refine_diff_density_min -0.269 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 0.914 _refine_ls_goodness_of_fit_obs 1.035 _refine_ls_matrix_type full _refine_ls_number_parameters 101 _refine_ls_number_reflns 3794 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.914 _refine_ls_restrained_S_obs 1.035 _refine_ls_R_factor_all 0.1023 _refine_ls_R_factor_obs 0.0572 _refine_ls_shift/esd_max 0.001 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0339P)^2^+1.6573P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.1210 _refine_ls_wR_factor_obs 0.1075 _reflns_number_observed 2363 _reflns_number_total 3794 _reflns_observed_criterion >2sigma(I) _cod_data_source_file pa1228.cif _cod_data_source_block 1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0339P)^2^+1.6573P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0339P)^2^+1.6573P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2005173 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0210(3) 0.0157(3) 0.0190(3) 0.0038(3) -0.0021(3) 0.0003(3) O2 0.0333(4) 0.0182(3) 0.0130(3) 0.0012(3) 0.0002(3) -0.0006(3) N1 0.0180(4) 0.0173(4) 0.0137(3) -0.0021(3) -0.0015(3) 0.0015(3) C1 0.0161(4) 0.0135(4) 0.0142(4) -0.0019(3) -0.0019(3) 0.0004(3) C2 0.0171(4) 0.0133(4) 0.0137(3) 0.0003(3) -0.0014(3) -0.0002(3) C3 0.0165(4) 0.0196(4) 0.0193(4) -0.0006(4) -0.0016(3) 0.0020(4) C4 0.0196(5) 0.0223(5) 0.0244(5) -0.0001(4) -0.0060(4) 0.0027(4) C5 0.0198(5) 0.0331(6) 0.0326(6) -0.0029(5) -0.0076(4) 0.0040(5) C6 0.0245(6) 0.0467(8) 0.0344(6) 0.0012(6) -0.0116(5) -0.0003(6) loop_ _atom_site_label _atom_site_occupancy _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_type_symbol O1 1 .71578(2) -.0773(2) .80067(8) .0186(2) Uani d . O O2 1 .68537(3) .2043(2) .95401(7) .0215(2) Uani d . O N1 1 .70227(3) .2976(2) .60017(8) .0163(2) Uani d . N H1 1 .7315(6) .324(4) .6287(17) .040(5) Uiso d . H H2 1 .6948(5) .442(4) .5390(15) .028(4) Uiso d . H H3 1 .7000(5) .124(4) .5565(16) .032(4) Uiso d . H C1 1 .69415(3) .1333(2) .83429(9) .0146(2) Uani d . C C2 1 .67399(3) .3110(2) .71972(9) .0147(2) Uani d . C H4 1 .67150(5) .503(3) .7490(4) .018 Uiso calc R H C3 1 .62927(3) .1939(2) .68403(10) .0185(2) Uani d . C H5 1 .63173(4) -.012(2) .6697(2) .022 Uiso calc R H H6 1 .6106(2) .2234(4) .7624(8) .022 Uiso calc R H C4 1 .60724(3) .3240(3) .55874(11) .0222(2) Uani d . C H7 1 .60533(4) .532(2) .5711(2) .027 Uiso calc R H H8 1 .6251(2) .2875(5) .4785(9) .027 Uiso calc R H C5 1 .56239(4) .2063(3) .53200(13) .0286(2) Uani d . C H9 1 .5440(2) .2582(6) .6077(9) .034 Uiso calc R H H10 1 .56396(4) -.001(2) .52867(13) .034 Uiso calc R H C6 1 .54177(4) .3139(4) .40024(14) .0354(3) Uani d . C H11 1 .5128(3) .230(2) .3880(6) .055(3) Uiso calc R H H12 1 .5598(3) .259(2) .3232(9) .055(3) Uiso calc R H H13 1 .5393(3) .523(2) .4039(5) .055(3) Uiso calc R H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 N1 H1 109.7(10) ? C2 N1 H2 109.7(9) ? H1 N1 H2 108.4(14) ? C2 N1 H3 111.4(10) ? H1 N1 H3 108.2(14) ? H2 N1 H3 109.3(13) ? O1 C1 O2 126.10(10) yes O1 C1 C2 117.00(10) yes O2 C1 C2 116.80(10) yes N1 C2 C1 108.80(10) yes N1 C2 C3 110.70(10) yes C1 C2 C3 109.00(10) yes N1 C2 H4 109.44(5) ? C1 C2 H4 109.44(5) ? C3 C2 H4 109.44(6) ? C4 C3 C2 115.40(10) yes C4 C3 H5 108.44(6) ? C2 C3 H5 108.44(6) ? C4 C3 H6 108.44(6) ? C2 C3 H6 108.44(5) ? H5 C3 H6 107.5 ? C5 C4 C3 112.70(10) yes C5 C4 H7 109.06(7) ? C3 C4 H7 109.06(6) ? C5 C4 H8 109.06(7) ? C3 C4 H8 109.06(6) ? H7 C4 H8 107.8 ? C4 C5 C6 113.10(10) yes C4 C5 H9 108.96(7) ? C6 C5 H9 108.96(8) ? C4 C5 H10 108.96(7) ? C6 C5 H10 108.96(8) ? H9 C5 H10 107.8 ? C5 C6 H11 109.47(8) ? C5 C6 H12 109.47(8) ? H11 C6 H12 109.5 ? C5 C6 H13 109.47(8) ? H11 C6 H13 109.5 ? H12 C6 H13 109.5 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 1.2480(10) yes O2 C1 1.2620(10) yes N1 C2 1.4870(10) yes N1 H1 0.95(2) ? N1 H2 0.94(2) ? N1 H3 0.93(2) ? C1 C2 1.5280(10) yes C2 C3 1.5290(10) yes C2 H4 0.9550(10) ? C3 C4 1.526(2) yes C3 H5 0.986(10) ? C3 H6 0.986(10) ? C4 C5 1.517(2) yes C4 H7 0.992(11) ? C4 H8 0.992(11) ? C5 C6 1.521(2) yes C5 H9 0.980(11) ? C5 H10 0.980(11) ? C6 H11 0.988(11) ? C6 H12 0.988(11) ? C6 H13 0.988(11) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 C1 C2 N1 -31.10(10) yes O2 C1 C2 N1 152.70(10) yes O1 C1 C2 C3 89.70(11) ? O2 C1 C2 C3 -86.50(11) ? N1 C2 C3 C4 -52.70(10) yes C1 C2 C3 C4 -172.30(10) yes C2 C3 C4 C5 -177.90(10) yes C3 C4 C5 C6 -174.60(10) yes C1 C2 N1 H1 -45.3(12) ? C1 C2 N1 H2 -164.3(10) ? C1 C2 N1 H3 74.6(10) ?