#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/52/2005218.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2005218 loop_ _publ_author_name 'Kovala-Demertzi, D.' 'Varagi, V.' 'Demertzis, M. A.' 'Raptopoulou, C. P.' 'Terzis, A.' _publ_section_title ; 2-Acetylpyridinium 4N-Phenylthiosemicarbazone Chloride 1.25-Hydrate ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 2027 _journal_page_last 2029 _journal_paper_doi 10.1107/S010827019600176X _journal_volume 52 _journal_year 1996 _chemical_formula_moiety 'C14 H15 Cl N4 S , 1.25H2 O' _chemical_formula_sum 'C14 H17.5 Cl N4 O1.25 S' _chemical_formula_weight 329.33 _space_group_IT_number 88 _symmetry_cell_setting tetragonal _symmetry_space_group_name_Hall '-I 4ad' _symmetry_space_group_name_H-M 'I 41/a :2' _atom_type_scat_source IntTabIV _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_formula_units_Z 16 _cell_length_a 32.41(1) _cell_length_b 32.41(1) _cell_length_c 6.056(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 298 _cell_measurement_theta_max 11.5 _cell_measurement_theta_min 5.5 _cell_volume 6361(4) _diffrn_measurement_device 'Nicolet P2~1~' _diffrn_measurement_method '\q/2\q scans' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.7107 _diffrn_reflns_av_R_equivalents 0.0941 _diffrn_reflns_limit_h_max 38 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 38 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 7 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3217 _diffrn_reflns_theta_max 25 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.378 _exptl_absorpt_correction_type none _exptl_crystal_colour 'brownish yellow' _exptl_crystal_density_diffrn 1.376 _exptl_crystal_density_meas 1.35 _exptl_crystal_density_method 'flotation in CHCl~3~/petroleum ether solution' _exptl_crystal_description prism _exptl_crystal_size_max 0.50 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.253 _refine_diff_density_min -0.176 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 2.35 _refine_ls_hydrogen_treatment ; All H atoms except those on water molecules were located from \DF synthesis and refined with isotropic displacement parameters ; _refine_ls_number_parameters 251 _refine_ls_number_reflns 2648 _refine_ls_R_factor_obs 0.0351 _refine_ls_shift/esd_max 0.002 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme unit _refine_ls_wR_factor_obs 0.0350 _reflns_number_observed 2021 _reflns_number_total 2805 _reflns_observed_criterion F~o~>6.0(F~o~) _cod_data_source_file bm1047.cif _cod_data_source_block bm1047a _cod_depositor_comments ; Marking attached hydrogen atoms. Antanas Vaitkus, 2017-01-19 Adding the _atom_site_type_symbol data item. Antanas Vaitkus, 2017-01-19 The following automatic conversions were performed: '_refine_ls_weighting_scheme' value ' unit' changed to 'unit' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 6361.80(10) _cod_original_sg_symbol_H-M 'I 41/a' _cod_database_code 2005218 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2+x,y,1/2-z 1/4+y,3/4-x,3/4-z 1/4-y,1/4+x,1/4-z -x,-y,-z 1/2-x,-y,1/2+z 3/4-y,1/4+x,1/4+z 3/4+y,3/4-x,3/4+z 1/2+x,1/2+y,1/2+z x,1/2+y,-z 3/4+y,1/4-x,1/4-z 3/4-y,3/4+x,3/4-z 1/2-x,1/2-y,1/2-z -x,1/2-y,z 1/4-y,3/4+x,3/4+z 1/4+y,1/4-x,1/4+z loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_attached_hydrogens S S .06236(2) .48528(3) -.0113(1) .0497 0 N1 N .00124(8) .38842(8) .8493(4) .046 0 N2 N .00680(7) .43442(7) .4906(4) .0401 0 N3 N .01389(7) .45555(8) .2998(4) .0433 0 N4 N .08215(7) .44000(8) .3420(4) .0467 0 C1 C .0024(1) .3646(1) 1.0291(6) .0564 0 C2 C -.0326(1) .3581(1) 1.1485(6) .0577 0 C3 C -.0680(1) .3766(1) 1.0808(6) .054 0 C4 C -.0684(1) .4015(1) .8958(5) .0473 0 C5 C -.03280(8) .40746(8) .7762(5) .0387 0 C6 C -.02965(8) .43220(8) .5726(6) .0386 0 C7 C .05353(8) .45863(8) .2203(5) .0388 0 C8 C .12576(8) .43978(9) .3073(5) .0435 0 C9 C .1430(1) .42619(9) .1128(6) .0491 0 C10 C .1854(1) .4230(1) .0979(7) .0613 0 C11 C .2102(1) .4335(1) .2724(8) .0725 0 C12 C .1927(1) .4476(1) .4629(8) .0726 0 C13 C .1505(1) .4508(1) .4841(6) .0587 0 C14 C -.0681(1) .4513(1) .4815(7) .0589 0 Cl Cl -0.11653(2) .33708(2) -0.4435(1) .054 0 O(1w) O .0472(1) .2169(1) .7526(8) .1568 2 O(2w) O 0 .25 .125 .2004 2 HN1 H .0237(9) .3912(9) .778(5) .053(9) 0 HN3 H -.0068(9) .4706(8) .221(5) .049(8) 0 HN4 H .073(1) .425(1) .453(6) .08(1) 0 H1 H .0295(9) .3528(9) 1.059(5) .061(9) 0 H2 H -.0326(9) .3441(9) 1.268(6) .054(9) 0 H3 H -.093(1) .373(1) 1.159(6) .07(1) 0 H4 H -.0915(9) .4162(9) .851(5) .051(9) 0 H9 H .1272(8) .4182(8) -.002(5) .041(8) 0 H10 H .196(1) .4166(9) -.030(6) .05(1) 0 H11 H .237(1) .431(1) .254(7) .08(1) 0 H12 H .208(1) .454(1) .578(5) .08(1) 0 H13 H .139(1) .459(1) .617(6) .08(1) 0 H141 H -.081(1) .466(1) .593(8) .12(2) 0 H142 H -.087(2) .429(2) .46(1) .15(2) 0 H143 H -.063(2) .461(2) .34(1) .17(3) 0 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N3 N2 C6 120.8(2) yes N2 N3 C7 119.4(2) yes C7 N4 C8 127.7(2) yes N1 C5 C6 118.0(2) yes C4 C5 C6 125.0(3) yes N2 C6 C5 114.7(2) yes N2 C6 C14 126.9(3) yes C5 C6 C14 118.4(3) yes S C7 N3 119.4(2) yes S C7 N4 125.5(2) yes N3 C7 N4 115.1(2) yes N4 C8 C9 121.9(3) yes N4 C8 C13 117.3(3) yes C1 N1 C5 124.0(3) no N1 C1 C2 119.6(3) no C1 C2 C3 118.9(3) no C2 C3 C4 120.5(3) no C3 C4 C5 120.1(3) no N1 C5 C4 116.9(3) no C9 C8 C13 120.5(3) no C8 C9 C10 118.9(3) no C9 C10 C11 121.0(4) no C10 C11 C12 119.4(4) no C11 C12 C13 121.1(4) no C8 C13 C12 119.0(4) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S C7 1.672(3) yes N2 N3 1.363(4) yes N2 C6 1.284(3) yes N3 C7 1.376(3) yes N4 C7 1.330(3) yes N4 C8 1.429(3) yes C5 C6 1.474(4) yes C6 C14 1.497(4) yes N1 C1 1.336(4) no N1 C5 1.339(4) no C1 C2 1.360(5) no C2 C3 1.355(5) no C3 C4 1.381(4) no C4 C5 1.376(4) no C8 C9 1.376(4) no C8 C13 1.385(4) no C9 C10 1.380(5) no C10 C11 1.370(6) no C11 C12 1.364(6) no C12 C13 1.376(5) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139055072