#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/53/2005348.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2005348 loop_ _publ_author_name 'Thabet, H.' 'Jouini, A.' _publ_section_title ; Tris(1,4-butanediyldiammonium) Bis(cyclotriphosphate) Tetrahydrate ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 2248 _journal_page_last 2250 _journal_paper_doi 10.1107/S0108270196002922 _journal_volume 52 _journal_year 1996 _chemical_formula_iupac '3C4 H14 N2 2+, 2P3 O9 3-, 4H2 O1' _chemical_formula_moiety '[N H3 (C H2)4 N H3]3 [P3 O9]2, 4H2 O' _chemical_formula_structural '[N H3 (C H2)4 N H3]3 [P3 O9]2, 4H2 O' _chemical_formula_sum 'C12 H50 N6 O22 P6' _chemical_formula_weight 816.40 _chemical_name_systematic ; Tris(1,4-butanediyldiammonium) bis(cyclotriphosphate) tetrahydrate ? ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _audit_creation_method SHELXL _cell_angle_alpha 92.930(10) _cell_angle_beta 93.310(10) _cell_angle_gamma 104.466(8) _cell_formula_units_Z 1 _cell_length_a 8.243(2) _cell_length_b 9.0790(10) _cell_length_c 12.0390(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 14 _cell_measurement_theta_min 10 _cell_volume 869.0(2) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'MolEN (Fair, 1990)' _computing_publication_material SHELXL93 _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0126 _diffrn_reflns_av_sigmaI/netI 0.0105 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3230 _diffrn_reflns_theta_max 25.08 _diffrn_reflns_theta_min 2.56 _diffrn_standards_decay_% 0.89 _diffrn_standards_interval_time 120 _diffrn_standards_number 1 _exptl_absorpt_coefficient_mu 0.398 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.560 _exptl_crystal_density_meas 1.52 _exptl_crystal_density_method 'pycnometric (toluene as pycnometric liquid)' _exptl_crystal_description 'truncated prism' _exptl_crystal_F_000 430 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.283 _refine_diff_density_min -0.280 _refine_ls_extinction_coef 0.044(3) _refine_ls_extinction_method 'SHELXL93 (Sheldrick, 1993)' _refine_ls_goodness_of_fit_all 1.076 _refine_ls_goodness_of_fit_obs 1.100 _refine_ls_hydrogen_treatment refall _refine_ls_matrix_type full _refine_ls_number_parameters 309 _refine_ls_number_reflns 3072 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.076 _refine_ls_restrained_S_obs 1.100 _refine_ls_R_factor_all 0.0297 _refine_ls_R_factor_obs 0.0263 _refine_ls_shift/esd_max 0.001 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme ; calc w = 1/[\s^2^(F~o~^2^) + (0.0403P)^2^ + 0.4746P] where P = (F~o~^2^ + 2F~c~^2^)/3 ; _refine_ls_wR_factor_all 0.0766 _refine_ls_wR_factor_obs 0.0745 _reflns_number_observed 2808 _reflns_number_total 3072 _reflns_observed_criterion >2sigma(I) _cod_data_source_file du1152.cif _cod_data_source_block dabtp _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value 'none' was changed to '?' - the value is undefined or not given. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2005348 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 0.0271(2) 0.0202(2) 0.0232(2) 0.0065(2) 0.0030(2) -0.0007(2) P2 0.0268(2) 0.0229(2) 0.0229(2) 0.0067(2) 0.0013(2) 0.0026(2) P3 0.0262(3) 0.0303(3) 0.0234(2) 0.0093(2) -0.0028(2) -0.0006(2) OE11 0.0457(8) 0.0292(7) 0.0315(7) 0.0111(6) 0.0014(6) -0.0081(5) OE12 0.0338(7) 0.0329(7) 0.0324(7) 0.0062(5) 0.0100(6) -0.0022(5) OL12 0.0264(7) 0.0302(7) 0.0430(8) 0.0031(5) -0.0058(6) 0.0114(6) OL13 0.0304(7) 0.0266(6) 0.0281(6) 0.0129(5) -0.0014(5) 0.0002(5) OE21 0.0452(8) 0.0272(7) 0.0383(8) 0.0112(6) -0.0071(6) 0.0060(6) OE22 0.0451(8) 0.0586(9) 0.0325(7) 0.0228(7) 0.0132(6) 0.0043(7) OL23 0.0413(7) 0.0253(6) 0.0280(7) 0.0082(5) -0.0071(5) -0.0017(5) OE31 0.0258(7) 0.0566(10) 0.0634(10) 0.0119(7) -0.0048(7) 0.0056(8) OE32 0.0561(9) 0.0484(9) 0.0230(7) 0.0148(7) 0.0018(6) -0.0048(6) OW1 0.0592(11) 0.0492(9) 0.0420(9) 0.0255(8) 0.0125(8) 0.0019(7) OW2 0.0510(10) 0.0417(9) 0.0598(11) 0.0208(8) -0.0083(8) -0.0122(8) N1 0.0306(9) 0.0270(8) 0.0301(9) 0.0118(7) 0.0025(7) -0.0003(7) N2 0.0370(10) 0.0343(9) 0.0295(9) 0.0117(8) 0.0032(7) -0.0012(7) N3 0.0431(11) 0.0337(9) 0.0275(9) 0.0088(8) 0.0027(7) -0.0059(7) C1 0.0307(10) 0.0287(9) 0.0326(10) 0.0107(8) 0.0045(8) 0.0016(8) C2 0.0305(10) 0.0289(10) 0.0404(11) 0.0104(8) 0.0063(8) 0.0003(8) C3 0.0349(11) 0.0362(10) 0.0279(10) 0.0131(8) 0.0035(8) 0.0020(8) C4 0.0318(10) 0.0322(10) 0.0288(10) 0.0071(8) 0.0014(8) 0.0009(8) C5 0.0352(11) 0.0341(10) 0.0283(10) 0.0093(8) 0.0025(8) -0.0014(8) C6 0.0355(11) 0.0342(10) 0.0299(10) 0.0072(8) -0.0010(8) -0.0027(8) loop_ _atom_site_label _atom_site_occupancy _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_type_symbol P1 1 0.38412(5) 0.57986(5) 0.25518(4) 0.02344(14) Uani d P P2 1 0.22845(5) 0.29839(5) 0.34538(4) 0.02411(14) Uani d P P3 1 0.09604(6) 0.37352(5) 0.13570(4) 0.02651(14) Uani d P OE11 1 0.4015(2) 0.71604(15) 0.33127(11) 0.0356(3) Uani d O OE12 1 0.5045(2) 0.58629(15) 0.16791(11) 0.0333(3) Uani d O OL12 1 0.3877(2) 0.43657(14) 0.32636(11) 0.0339(3) Uani d O OL13 1 0.19577(15) 0.53501(13) 0.19889(10) 0.0276(3) Uani d O OE21 1 0.2976(2) 0.17137(15) 0.37985(11) 0.0368(3) Uani d O OE22 1 0.1117(2) 0.3539(2) 0.41437(12) 0.0432(4) Uani d O OL23 1 0.1481(2) 0.25726(14) 0.22033(10) 0.0320(3) Uani d O OE31 1 -0.0831(2) 0.3637(2) 0.14078(14) 0.0486(4) Uani d O OE32 1 0.1714(2) 0.3528(2) 0.03005(11) 0.0425(4) Uani d O OW1 1 0.1433(2) 0.4755(2) 0.62967(15) 0.0477(4) Uani d O OW2 1 0.2338(2) 0.9106(2) 0.24067(15) 0.0502(4) Uani d O N1 1 -0.3981(2) 0.3511(2) 0.05530(14) 0.0285(3) Uani d N N2 1 0.6437(2) 0.2481(2) 0.44668(15) 0.0332(4) Uani d N N3 1 0.0938(2) 0.2556(2) -0.19197(15) 0.0352(4) Uani d N C1 1 0.5011(2) 0.8048(2) -0.0692(2) 0.0300(4) Uani d C C2 1 -0.4445(2) 0.0801(2) -0.0031(2) 0.0327(4) Uani d C C3 1 -0.2707(3) 0.1220(2) 0.4425(2) 0.0322(4) Uani d C C4 1 -0.2664(3) 0.0595(2) 0.3246(2) 0.0312(4) Uani d C C5 1 0.8238(3) 0.9326(2) 0.3199(2) 0.0325(4) Uani d C C6 1 0.8248(3) 0.8724(2) 0.2006(2) 0.0338(4) Uani d C H1W1 1 0.1298(37) 0.4266(35) 0.5637(28) 0.070(9) Uiso d H H2W1 1 0.0675(47) 0.5066(43) 0.6317(31) 0.093(13) Uiso d H H1W2 1 0.2563(32) 0.9948(34) 0.2848(23) 0.058(8) Uiso d H H2W2 1 0.2891(41) 0.8571(38) 0.2770(27) 0.079(10) Uiso d H H1N1 1 -0.4303(27) 0.4189(27) 0.0978(19) 0.036(6) Uiso d H H2N1 1 -0.4078(30) 0.3789(27) -0.0132(22) 0.045(6) Uiso d H H3N1 1 -0.2891(32) 0.3600(25) 0.0752(19) 0.041(6) Uiso d H H1N2 1 0.6319(29) 0.2768(27) 0.5207(22) 0.044(6) Uiso d H H2N2 1 0.7086(31) 0.3278(29) 0.4173(20) 0.044(6) Uiso d H H3N2 1 0.5418(34) 0.2184(28) 0.4144(21) 0.047(7) Uiso d H H1N3 1 0.1368(34) 0.3319(31) -0.2401(24) 0.061(8) Uiso d H H2N3 1 0.1105(30) 0.2962(28) -0.1182(23) 0.051(7) Uiso d H H3N3 1 -0.0170(36) 0.2205(30) -0.2064(22) 0.051(7) Uiso d H H1C1 1 0.6165(30) 0.8074(25) -0.0517(18) 0.038(6) Uiso d H H2C1 1 0.4911(27) 0.8249(25) -0.1456(20) 0.040(6) Uiso d H H1C2 1 -0.4454(28) 0.1084(25) -0.0795(21) 0.042(6) Uiso d H H2C2 1 -0.3292(30) 0.0840(25) 0.0224(19) 0.043(6) Uiso d H H1C3 1 -0.1573(30) 0.1621(26) 0.4750(19) 0.043(6) Uiso d H H2C3 1 -0.3311(27) 0.0437(25) 0.4886(18) 0.036(5) Uiso d H H1C4 1 -0.3797(28) 0.0226(23) 0.2927(17) 0.033(5) Uiso d H H2C4 1 -0.2140(29) 0.1415(27) 0.2799(19) 0.043(6) Uiso d H H1C5 1 0.9380(32) 0.9670(27) 0.3514(20) 0.047(6) Uiso d H H2C5 1 0.7692(29) 0.8481(27) 0.3619(19) 0.042(6) Uiso d H H1C6 1 0.7145(31) 0.8374(26) 0.1674(20) 0.045(6) Uiso d H H2C6 1 0.8862(28) 0.9528(26) 0.1577(19) 0.039(6) Uiso d H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag OE11 P1 OE12 . . 118.42(8) y OE11 P1 OL12 . . 109.44(8) y OE12 P1 OL12 . . 108.34(8) y OE11 P1 OL13 . . 107.31(7) y OE12 P1 OL13 . . 109.81(7) y OL12 P1 OL13 . . 102.34(7) y OE22 P2 OE21 . . 120.48(9) y OE22 P2 OL23 . . 110.06(8) y OE21 P2 OL23 . . 107.92(8) y OE22 P2 OL12 . . 109.95(9) y OE21 P2 OL12 . . 106.08(8) y OL23 P2 OL12 . . 100.44(7) y OE31 P3 OE32 . . 122.31(9) y OE31 P3 OL13 . . 106.68(8) y OE32 P3 OL13 . . 109.29(8) y OE31 P3 OL23 . . 108.81(8) y OE32 P3 OL23 . . 107.35(8) y OL13 P3 OL23 . . 100.17(6) y P1 OL12 P2 . . 125.82(8) y P1 OL13 P3 . . 127.26(8) y P2 OL23 P3 . . 126.68(8) y P1 P2 P3 . . 60.46(2) y P1 P3 P2 . . 59.46(2) y P2 P1 P3 . . 60.06(2) y H1W1 OW1 H2W1 . . 103(4) y H1W2 OW2 H2W2 . . 100(3) y C1 N1 H1N1 2_565 . 110.8(14) n C1 N1 H2N1 2_565 . 112.7(16) n H1N1 N1 H2N1 . . 106.(2) n C1 N1 H3N1 2_565 . 111.3(14) n H1N1 N1 H3N1 . . 107.(2) n H2N1 N1 H3N1 . . 109.(2) n C3 N2 H1N2 1_655 . 109.8(14) n C3 N2 H2N2 1_655 . 108.1(15) n H1N2 N2 H2N2 . . 108.(2) n C3 N2 H3N2 1_655 . 111.1(16) n H1N2 N2 H3N2 . . 106.(2) n H2N2 N2 H3N2 . . 114.(2) n C6 N3 H1N3 2_665 . 112.2(16) n C6 N3 H2N3 2_665 . 108.1(15) n H1N3 N3 H2N3 . . 110.(2) n C6 N3 H3N3 2_665 . 109.8(16) n H1N3 N3 H3N3 . . 110.(2) n H2N3 N3 H3N3 . . 107.(2) n N1 C1 C2 2_565 2_565 110.5(2) y N1 C1 H1C1 2_565 . 108.4(13) n C2 C1 H1C1 2_565 . 111.9(13) n N1 C1 H2C1 2_565 . 108.5(13) n C2 C1 H2C1 2_565 . 110.8(13) n H1C1 C1 H2C1 . . 106.7(19) n C1 C2 C2 2_565 2_455 111.8(2) y C1 C2 H1C2 2_565 . 109.4(14) n C2 C2 H1C2 2_455 . 109.8(14) n C1 C2 H2C2 2_565 . 107.5(14) n C2 C2 H2C2 2_455 . 110.2(13) n H1C2 C2 H2C2 . . 108.1(19) n N2 C3 C4 1_455 . 111.7(2) y N2 C3 H1C3 1_455 . 107.8(14) n C4 C3 H1C3 . . 109.5(14) n N2 C3 H2C3 1_455 . 106.9(13) n C4 C3 H2C3 . . 111.6(13) n H1C3 C3 H2C3 . . 109.2(18) n C3 C4 C5 . 1_445 111.8(2) y C3 C4 H1C4 . . 108.6(12) n C5 C4 H1C4 1_445 . 110.2(12) n C3 C4 H2C4 . . 109.4(14) n C5 C4 H2C4 1_445 . 111.0(14) n H1C4 C4 H2C4 . . 105.7(18) n C6 C5 C4 . 1_665 110.3(2) y C6 C5 H1C5 . . 108.7(14) n C4 C5 H1C5 1_665 . 111.8(14) n C6 C5 H2C5 . . 107.8(14) n C4 C5 H2C5 1_665 . 111.5(13) n H1C5 C5 H2C5 . . 106.6(19) n N3 C6 C5 2_665 . 112.4(2) y N3 C6 H1C6 2_665 . 107.7(14) n C5 C6 H1C6 . . 110.9(14) n N3 C6 H2C6 2_665 . 107.6(13) n C5 C6 H2C6 . . 109.8(13) n H1C6 C6 H2C6 . . 108.3(19) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P1 OE11 . 1.4727(13) y P1 OE12 . 1.4796(13) y P1 OL12 . 1.5993(13) y P1 OL13 . 1.6031(13) y P2 OE22 . 1.4700(14) y P2 OE21 . 1.4755(13) y P2 OL23 . 1.5964(13) y P2 OL12 . 1.6098(13) y P3 OE31 . 1.462(2) y P3 OE32 . 1.4712(14) y P3 OL13 . 1.6174(13) y P3 OL23 . 1.6193(13) y P1 P2 . 2.8570(10) y P1 P3 . 2.8850(10) y P2 P3 . 2.8740(10) y OW1 H1W1 . 0.88(3) y OW1 H2W1 . 0.75(4) y OW2 H1W2 . 0.88(3) y OW2 H2W2 . 0.86(4) y N1 C1 2_565 1.481(2) y N1 H1N1 . 0.88(2) n N1 H2N1 . 0.88(3) n N1 H3N1 . 0.90(2) n N2 C3 1_655 1.487(2) y N2 H1N2 . 0.93(3) n N2 H2N2 . 0.89(3) n N2 H3N2 . 0.88(3) n N3 C6 2_665 1.482(3) y N3 H1N3 . 0.94(3) n N3 H2N3 . 0.93(3) n N3 H3N3 . 0.89(3) n C1 N1 2_565 1.481(2) n C1 C2 2_565 1.506(3) y C1 H1C1 . 0.96(2) n C1 H2C1 . 0.95(2) n C2 C1 2_565 1.506(3) n C2 C2 2_455 1.520(4) y C2 H1C2 . 0.97(2) n C2 H2C2 . 0.97(2) n C3 N2 1_455 1.487(2) n C3 C4 . 1.508(3) y C3 H1C3 . 0.97(2) n C3 H2C3 . 0.98(2) n C4 C5 1_445 1.519(3) y C4 H1C4 . 0.96(2) n C4 H2C4 . 0.97(2) n C5 C6 . 1.512(3) y C5 C4 1_665 1.519(3) n C5 H1C5 . 0.96(3) n C5 H2C5 . 0.97(2) n C6 N3 2_665 1.482(3) n C6 H1C6 . 0.94(2) n C6 H2C6 . 0.97(2) n loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 168307609