#------------------------------------------------------------------------------ #$Date: 2017-02-07 09:11:13 +0000 (Tue, 07 Feb 2017) $ #$Revision: 191871 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/55/2005579.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2005579 loop_ _publ_author_name 'Zhu, Y.' 'Liu, B.' 'Guo, Q.-X.' 'Liu, Y.-C.' _publ_section_title ; (2,4-Dinitrophenyl)(10-methyl-3-phenothiazinyl)diazene Hemimethanol Solvate ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 2789 _journal_page_last 2791 _journal_paper_doi 10.1107/S0108270196007597 _journal_volume 52 _journal_year 1996 _chemical_formula_iupac 'C19 H13 N5 O4 S , 0.5C H4 O' _chemical_formula_moiety 'C19 H13 N5 O4 S , 0.5C H3 O H' _chemical_formula_sum 'C19.5 H15 N5 O4.5 S' _chemical_formula_weight 423.43 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_type_scat_source IntTabIV _cell_angle_alpha 90 _cell_angle_beta 91.61(1) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 14.5086(15) _cell_length_b 34.527(3) _cell_length_c 3.8910(8) _cell_measurement_reflns_used 25 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 24.58 _cell_measurement_theta_min 17.56 _cell_volume 1948.4(5) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'SDP-Plus (Frenz, 1985)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_structure_refinement SDP-Plus _computing_structure_solution SDP-Plus _diffrn_measurement_device 'Enraf-Nonius CAD-4' _diffrn_measurement_method '\w/2\q scans' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents 0.105 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 38 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 4 _diffrn_reflns_limit_l_min -4 _diffrn_reflns_number 2853 _diffrn_reflns_theta_max 58 _diffrn_standards_decay_% -2.0 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.79 _exptl_absorpt_correction_T_max 0.9996 _exptl_absorpt_correction_T_min 0.9643 _exptl_absorpt_correction_type '\y scans of high \c reflections' _exptl_crystal_colour 'intense violet' _exptl_crystal_density_diffrn 1.443 _exptl_crystal_density_meas 1.422 _exptl_crystal_density_method flotation _exptl_crystal_description needle _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.15 _exptl_crystal_size_min 0.05 _refine_diff_density_max 0.38 _refine_diff_density_min -0.37 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.528 _refine_ls_hydrogen_treatment 'refxyz (except H atom of methanol molecule)' _refine_ls_number_parameters 280 _refine_ls_number_reflns 2002 _refine_ls_R_factor_obs 0.075 _refine_ls_shift/esd_max 0.03 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme unit _refine_ls_wR_factor_obs 0.075 _reflns_number_observed 2002 _reflns_number_total 2631 _reflns_observed_criterion I>3.0\s(I) _cod_data_source_file bm0002.cif _cod_data_source_block bm0002a _cod_depositor_comments ; Adding the _atom_site_occupancy data item after consulting the original publication. Antanas Vaitkus, 2017-02-07 Adding the _atom_site_type_symbol data item. Antanas Vaitkus, 2017-02-07 The following automatic conversions were performed: '_refine_ls_weighting_scheme' value ' unit' changed to 'unit' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 1948.4 _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2005579 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2+x,1/2-y,1/2+z -x,-y,-z 1/2-x,1/2+y,1/2-z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S5 0.0368(6) 0.0555(7) 0.0696(8) 0.0014(6) 0.0076(6) 0.0076(6) O1 0.078(3) 0.102(3) 0.138(4) -0.039(2) -0.007(3) -0.024(3) O2 0.068(3) 0.093(3) 0.258(6) -0.006(3) 0.063(3) -0.004(4) O3 0.103(3) 0.061(2) 0.125(4) 0.003(2) -0.015(3) 0.025(3) O4 0.085(3) 0.059(2) 0.160(4) -0.020(3) 0.010(3) 0.023(3) N3 0.048(2) 0.044(2) 0.057(2) -0.004(2) -0.001(2) -0.005(2) N10 0.046(2) 0.049(2) 0.049(2) 0.012(2) -0.004(2) 0.003(2) N1' 0.053(2) 0.043(2) 0.056(2) -0.004(2) 0.001(2) 0.000(2) N2' 0.049(2) 0.060(3) 0.107(4) -0.010(2) -0.006(3) 0.010(3) N4' 0.081(3) 0.051(2) 0.082(3) -0.001(2) 0.011(3) 0.003(2) C1 0.037(2) 0.055(3) 0.054(3) 0.004(2) -0.001(2) -0.001(2) C2 0.036(2) 0.061(3) 0.059(3) -0.004(2) 0.003(2) -0.009(3) C3 0.045(2) 0.044(2) 0.046(2) -0.002(2) 0.000(2) -0.007(2) C4 0.041(2) 0.046(3) 0.048(3) 0.003(2) -0.001(2) -0.003(2) C6 0.067(3) 0.055(3) 0.063(3) -0.011(3) -0.001(3) 0.009(3) C7 0.083(4) 0.063(3) 0.076(4) -0.020(3) -0.004(3) 0.002(3) C8 0.097(4) 0.047(3) 0.079(4) -0.007(3) 0.007(3) -0.007(3) C9 0.075(3) 0.049(3) 0.062(3) 0.006(3) 0.002(3) 0.004(3) C11 0.040(2) 0.047(2) 0.036(2) 0.006(2) 0.000(2) -0.004(2) C12 0.034(2) 0.048(3) 0.043(2) -0.002(2) 0.005(2) -0.001(2) C13 0.055(3) 0.043(3) 0.051(3) 0.002(2) 0.003(2) 0.005(2) C14 0.052(3) 0.049(3) 0.046(2) -0.001(2) 0.005(2) 0.008(2) C15 0.047(3) 0.062(3) 0.060(3) 0.015(2) -0.007(2) 0.008(3) C1' 0.049(3) 0.044(2) 0.045(2) -0.002(2) 0.004(2) -0.003(2) C2' 0.046(3) 0.048(3) 0.063(3) -0.011(2) 0.005(2) -0.004(2) C3' 0.052(3) 0.048(3) 0.066(3) 0.000(2) 0.000(3) -0.003(3) C4' 0.062(3) 0.040(3) 0.061(3) -0.004(2) 0.007(3) 0.002(2) C5' 0.054(3) 0.052(3) 0.074(3) -0.010(3) 0.008(3) -0.005(3) C6' 0.046(3) 0.051(3) 0.072(3) -0.006(2) 0.003(3) 0.000(3) loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_B_iso_or_equiv _atom_site_occupancy S5 S 0.70794(8) 0.22460(4) 0.1984(4) 4.25(3) 1 O1 O 0.6600(3) 0.3572(1) -0.701(1) 8.4(1) 1 O2 O 0.6062(3) 0.4042(2) -0.421(2) 10.9(2) 1 O3 O 0.7675(3) 0.5142(1) -1.070(1) 7.6(1) 1 O4 O 0.9067(3) 0.5232(1) -0.883(1) 8.0(1) 1 N3 N 0.9019(3) 0.3404(1) -0.222(1) 3.94(9) 1 N10 N 0.8963(3) 0.1908(1) 0.319(1) 3.80(8) 1 N1' N 0.8260(3) 0.3555(1) -0.312(1) 4.00(9) 1 N2' N 0.6663(3) 0.3893(1) -0.574(1) 5.7(1) 1 N4' N 0.8364(3) 0.5040(1) -0.916(1) 5.6(1) 1 C1 C 0.9788(3) 0.2493(2) 0.159(1) 3.9(1) 1 C2 C 0.9770(3) 0.2861(2) 0.028(1) 4.1(1) 1 C3 C 0.8951(3) 0.3037(1) -0.076(1) 3.6(1) 1 C4 C 0.8117(3) 0.2835(1) -0.037(1) 3.6(1) 1 C6 C 0.6723(4) 0.1504(2) -0.007(1) 4.9(1) 1 C7 C 0.6945(4) 0.1117(2) -0.053(2) 5.9(1) 1 C8 C 0.7834(5) 0.0995(2) 0.023(2) 5.9(1) 1 C9 C 0.8505(4) 0.1247(2) 0.145(1) 4.9(1) 1 C11 C 0.8969(3) 0.2284(1) 0.195(1) 3.26(9) 1 C12 C 0.8130(3) 0.2470(1) 0.102(1) 3.29(9) 1 C13 C 0.7386(3) 0.1761(1) 0.119(1) 3.9(1) 1 C14 C 0.8285(3) 0.1639(1) 0.197(1) 3.8(1) 1 C15 C 0.9815(3) 0.1749(2) 0.471(1) 4.5(1) 1 C1' C 0.8348(3) 0.3923(1) -0.465(1) 3.6(1) 1 C2' C 0.7550(3) 0.4098(1) -0.593(1) 4.1(1) 1 C3' C 0.7527(4) 0.4462(2) -0.738(1) 4.4(1) 1 C4' C 0.8363(4) 0.4653(1) -0.750(1) 4.3(1) 1 C5' C 0.9173(4) 0.4498(2) -0.628(1) 4.7(1) 1 C6' C 0.9172(3) 0.4131(2) -0.484(1) 4.5(1) 1 OM O 0 0 0.500 9.8(8) 0.14 OM1 O 0.476(2) 0.4881(9) 0.784(7) 8.2(7) 0.18 OM2 O 0.518(2) 0.5084(8) 0.748(7) 7.7(7) 0.18 CM C -0.021(3) 0.024(1) 0.53(1) 9(1) 0.2 CM1 C -0.024(2) 0.0083(9) 0.017(9) 8.6(7) 0.3 H1 H 1.033(4) 0.238(2) 0.21(1) 4.0 1 H2 H 1.033(4) 0.298(2) -0.03(1) 4.0 1 H4 H 0.758(4) 0.297(2) -0.10(1) 4.0 1 H6 H 0.600(4) 0.161(2) -0.04(1) 4.0 1 H7 H 0.644(4) 0.092(2) -0.16(1) 4.0 1 H8 H 0.798(4) 0.074(2) -0.02(1) 4.0 1 H9 H 0.916(4) 0.116(2) 0.22(1) 4.0 1 H15 H 0.964(4) 0.152(2) 0.62(1) 4.0 1 H15' H 1.008(4) 0.195(2) 0.60(1) 4.0 1 H15" H 1.027(4) 0.171(2) 0.30(1) 4.0 1 H3' H 0.694(4) 0.460(2) -0.81(1) 4.0 1 H5' H 0.974(4) 0.464(2) -0.66(1) 4.0 1 H6' H 0.972(4) 0.401(2) -0.42(1) 4.0 1 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C12 S5 C13 99.1(2) yes C11 N10 C14 120.4(4) yes N10 C11 C12 120.0(3) yes S5 C12 C11 119.4(3) yes C11 N10 C15 118.8(3) yes N1' N3 C3 114.8(3) yes O1 N2' O2 123.4(4) yes O1 N2' C2' 118.2(4) yes N10 C11 C1 122.1(3) yes S5 C12 C4 119.1(3) yes N1' C1' C6' 124.9(4) yes N1' C1' C2' 117.4(3) yes N2' C2' C3' 116.6(4) yes N2' C2' C1' 119.7(4) yes C14 N10 C15 117.1(4) no N3 N1' C1' 113.7(4) no O2 N2' C2' 118.4(5) no O3 N4' O4 124.8(5) no O3 N4' C4' 118.1(5) no O4 N4' C4' 117.1(5) no C2 C1 C11 120.5(4) no C1 C2 C3 121.5(4) no N3 C3 C2 116.6(4) no N3 C3 C4 124.4(4) no C2 C3 C4 119.0(4) no C3 C4 C12 119.7(4) no C7 C6 C13 120.0(5) no C6 C7 C8 119.1(5) no C7 C8 C9 121.7(5) no C8 C9 C14 119.6(5) no C1 C11 C12 117.9(4) no C4 C12 C11 121.3(5) no S5 C13 C6 119.7(4) no S5 C13 C14 119.2(4) no C6 C13 C14 121.1(5) no N10 C14 C9 121.2(4) no N10 C14 C13 120.5(4) no C9 C14 C13 118.4(5) no C2' C1' C6' 117.7(4) no C1' C2' C3' 123.8(5) no C2' C3' C4' 116.0(5) no N4' C4' C3' 117.1(5) no N4' C4' C5' 119.6(5) no C3' C4' C5' 123.3(5) no C4' C5' C6' 119.3(5) no C1' C6' C5' 120.2(5) no H15 C15 H15' 112(5) no H15 C15 H15" 119(5) no H15' C15 H15" 100(5) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag S5 C12 1.758(4) yes S5 C13 1.762(4) yes O3 N4' 1.205(5) yes O4 N4' 1.221(6) yes N10 C11 1.385(5) yes N10 C14 1.426(5) yes N10 C15 1.465(5) yes N1' N3 1.258(4) yes N3 C3 1.394(5) yes N4' C4' 1.482(5) yes C1 C2 1.370(6) yes C2 C3 1.384(5) yes C3 C4 1.410(5) yes C4 C12 1.369(5) yes C1 C11 1.400(5) yes O1 N2' 1.218(7) no O2 N2' 1.186(7) no N1' C1' 1.410(7) no N2' C2' 1.471(7) no C6 C7 1.386(9) no C6 C13 1.388(7) no C7 C8 1.390(10) no C8 C9 1.382(8) no C9 C14 1.406(7) no C11 C12 1.414(6) no C13 C14 1.396(7) no C1' C2' 1.386(7) no C1' C6' 1.399(7) no C2' C3' 1.379(8) no C3' C4' 1.383(7) no C4' C5' 1.364(7) no C5' C6' 1.386(7) no C1 H1 0.90(6) no C2 H2 0.94(6) no C4 H4 0.93(6) no C6 H6 1.11(6) no C7 H7 1.08(6) no C8 H8 0.93(6) no C9 H9 1.13(6) no C15 H15 0.99(6) no C15 H15' 0.94(6) no C15 H15" 0.96(6) no C3' H3' 1.00(6) no C5' H5' 0.96(6) no C6' H6' 0.92(6) no