#------------------------------------------------------------------------------ #$Date: 2008-01-13 22:15:36 +0000 (Sun, 13 Jan 2008) $ #$Revision: 14 $ #$URL: svn://www.crystallography.net/cod/cif/2/2006110.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2006110 _journal_name_full 'Acta Crystallographica' _journal_year 1997 _journal_volume C53 _journal_page_first 610 _journal_page_last 612 _publ_section_title ; Structural Studies of Mitomycins. IX. Structure of 6-Demethyl-6-(phenylthiomethyl)mitomycin C ; loop_ _publ_author_name 'Sugaya, Nobutaka' 'Fujii, Isao' 'Hirayama, Noriaki' 'Arai, Hitoshi' 'Kasai, Masaji' _chemical_formula_sum 'C21 H22 N4 O5 S1' _chemical_formula_weight 442.5 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_H-M 'P 21 21 21' loop_ _symmetry_equiv_pos_as_xyz ' +x, +y, +z' '1/2-x, -y,1/2+z' '1/2+x,1/2-y, -z' ' -x,1/2+y,1/2-z' _cell_length_a 14.4649(9) _cell_length_b 18.015(2) _cell_length_c 8.0881(8) _cell_angle_alpha 90 _cell_angle_beta 90 _cell_angle_gamma 90 _cell_volume 2107.6(3) _cell_formula_units_Z 4 _cell_measurement_temperature 20.0 _exptl_crystal_density_diffrn 1.394 _diffrn_ambient_temperature 293 _refine_ls_R_factor_obs .052 _refine_ls_wR_factor_obs .080 loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy S6a .10701(7) .76328(8) .10280(10) .0876(3) Uij 1.0 O5 .19460(10) .5958(2) .2149(4) .0819(8) Uij 1.0 O8 .5000(2) .75810(10) .2992(4) .0746(8) Uij 1.0 O9a .5176(2) .4808(2) .0447(4) .0910(9) Uij 1.0 O10 .65750(10) .54810(10) .3316(3) .0582(6) Uij 1.0 O10a .6948(2) .56510(10) .5982(3) .0644(6) Uij 1.0 N1a .4148(3) .4832(2) .4530(4) .0900(10) Uij 1.0 N4 .3756(2) .5317(2) .1565(4) .0544(7) Uij 1.0 N7 .3408(2) .8252(2) .3260(5) .0771(10) Uij 1.0 N10 .7768(2) .4881(2) .4316(4) .0778(10) Uij 1.0 C1 .4769(3) .4605(2) .3199(5) .0710(10) Uij 1.0 C2 .3816(3) .4297(2) .3311(7) .0930(10) Uij 1.0 C3 .3207(2) .4654(2) .2053(6) .0770(10) Uij 1.0 C4a .3578(2) .6027(2) .2026(4) .0493(7) Uij 1.0 C5 .2631(2) .6350(2) .2277(4) .0581(8) Uij 1.0 C6 .2575(2) .7116(2) .2717(4) .0599(9) Uij 1.0 C6a .1632(2) .7424(2) .3009(5) .0720(10) Uij 1.0 C7 .3359(2) .7532(2) .2892(4) .0583(8) Uij 1.0 C8a .4353(2) .6430(2) .2278(4) .0496(7) Uij 1.0 C8 .4322(2) .7194(2) .2704(5) .0568(8) Uij 1.0 C9a .4763(2) .5166(2) .1820(4) .0469(7) Uij 1.0 C9b1 .4940(5) .4900(6) -.1068(8) .115(3) Uij .7 C9b2 .4750(10) .4329(9) -.063(2) .113(4) Uij .3 C9 .5192(2) .5941(2) .2108(4) .0471(7) Uij 1.0 C10a .7097(2) .5358(2) .4634(4) .0496(7) Uij 1.0 C10 .5804(2) .5985(2) .3599(5) .0614(8) Uij 1.0 C11 -.0116(2) .7649(2) .1651(5) .0690(10) Uij 1.0 C12 -.0456(3) .8229(3) .2546(7) .103(2) Uij 1.0 C13 -.1377(4) .8234(4) .3030(7) .124(2) Uij 1.0 C14 -.1975(3) .7699(4) .2531(7) .116(2) Uij 1.0 C15 -.1670(4) .7150(4) .1634(9) .122(2) Uij 1.0 C16 -.0707(3) .7101(3) .1181(7) .0930(10) Uij 1.0 H1 .4259 .4670 .5638 .1054 Uij 1.0 H2 .2862 .8532 .3430 .0928 Uij 1.0 H3 .3998 .8484 .3408 .1054 Uij 1.0 H4 .8181 .4739 .5165 .0970 Uij 1.0 H5 .7833 .4684 .3232 .0970 Uij 1.0 H6 -.0062 .8630 .2860 .1238 Uij 1.0 H7 -.1584 .8626 .3744 .1470 Uij 1.0 H8 -.2082 .6778 .1307 .1453 Uij 1.0 H9 -.0484 .6684 .0562 .1470 Uij 1.0 H10 -.2598 .7744 .2822 .1105 Uij 1.0 H11 .1675 .7864 .3638 .0850 Uij 1.0 H12 .1271 .7067 .3585 .0850 Uij 1.0 H13 .5474 .5837 .4553 .0743 Uij 1.0 H14 .6031 .6475 .3735 .1105 Uij 1.0 H15 .2629 .4798 .2538 .0935 Uij 1.0 H16 .3093 .4335 .1149 .1105 Uij 1.0 H17 .5289 .4305 .3415 .0849 Uij 1.0 H18 .3729 .3796 .3604 .0850 Uij 1.0 H19 .5531 .6089 .1150 .1105 Uij 1.0 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S6a .0581(4) .1332(8) .0716(5) .0385(5) -.0014(4) .0114(6) O5 .0350(10) .099(2) .112(2) -.0010(10) -.0010(10) -.025(2) O8 .0510(10) .0590(10) .114(2) -.0080(10) .0030(10) -.007(2) O9a .0490(10) .146(2) .079(2) .012(2) .0000(10) -.055(2) O10 .0410(9) .0760(10) .0570(10) .0188(10) -.0142(10) -.0150(10) O10a .0660(10) .0660(10) .0610(10) .0080(10) -.0170(10) -.0090(10) N1a .114(3) .095(2) .062(2) -.006(2) .019(2) .017(2) N4 .0330(10) .0570(10) .073(2) -.0010(10) -.0020(10) -.0050(10) N7 .068(2) .061(2) .102(2) .0170(10) .007(2) -.002(2) N10 .063(2) .099(2) .072(2) .037(2) -.020(2) -.017(2) C1 .079(2) .052(2) .082(2) .012(2) -.001(2) .007(2) C2 .108(3) .053(2) .117(3) -.009(2) .044(3) .008(2) C3 .056(2) .066(2) .109(3) -.012(2) .018(2) -.005(2) C4a .0330(10) .061(2) .054(2) .0050(10) -.0010(10) -.0010(10) C5 .0330(10) .078(2) .063(2) .0040(10) -.0080(10) -.004(2) C6 .0430(10) .074(2) .063(2) .0200(10) -.0080(10) -.002(2) C6a .048(2) .095(2) .074(2) .030(2) -.009(2) -.008(2) C7 .052(2) .058(2) .065(2) .0160(10) .0020(10) .001(2) C8a .0330(10) .0560(10) .060(2) .0050(10) -.0050(10) .0030(10) C8 .0480(10) .053(2) .069(2) .0080(10) -.001(2) .006(2) C9a .0340(10) .056(2) .0500(10) .0070(10) .0020(10) -.0040(10) C9b1 .065(3) .226(10) .055(3) .003(5) -.009(3) -.032(7) C9b2 .067(7) .104(7) .170(10) -.029(7) .024(8) -.102(8) C9 .0320(10) .0530(10) .056(2) .0060(10) -.0010(10) -.0010(10) C10a .0390(10) .055(2) .0550(10) .0030(10) -.0130(10) -.0050(10) C10 .0430(10) .072(2) .070(2) .0190(10) -.0160(10) -.019(2) C11 .057(2) .091(2) .059(2) .032(2) -.012(2) -.005(2) C12 .076(2) .124(4) .110(3) .044(2) -.019(3) -.043(3) C13 .105(3) .177(5) .091(3) .083(3) .007(3) -.023(4) C14 .070(3) .177(6) .101(3) .039(3) .005(3) .008(4) C15 .087(3) .133(5) .144(5) -.006(3) -.027(4) .022(4) C16 .083(3) .100(3) .096(3) .019(2) .003(3) -.012(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag S6a C6a . . 1.836(4) yes S6a C11 . . 1.788(4) yes O5 C5 . . 1.221(4) yes O8 C8 . . 1.226(4) yes O9a C9a . . 1.416(4) yes O9a C9b1 . . 1.283(7) no O9a C9b2 . . 1.370(10) no O10 C10a . . 1.325(4) no O10 C10 . . 1.457(4) no O10a C10a . . 1.230(4) no N1a C1 . . 1.461(5) yes N1a C2 . . 1.461(6) yes N4 C3 . . 1.487(5) yes N4 C4a . . 1.357(4) yes N4 C9a . . 1.497(3) yes N7 C7 . . 1.333(5) yes N10 C10a . . 1.322(4) no C1 C2 . . 1.489(6) yes C1 C9a . . 1.505(5) yes C2 C3 . . 1.491(7) yes C4a C5 . . 1.502(4) yes C4a C8a . . 1.350(4) yes C5 C6 . . 1.428(5) yes C6 C6a . . 1.491(4) yes C6 C7 . . 1.366(5) yes C7 C8 . . 1.529(4) yes C8a C8 . . 1.419(5) yes C8a C9 . . 1.506(4) yes C9a C9 . . 1.545(4) yes C9 C10 . . 1.498(4) yes C11 C12 . . 1.363(6) no C11 C16 . . 1.360(7) no C12 C13 . . 1.389(7) no C13 C14 . . 1.356(9) no C14 C15 . . 1.304(9) no C15 C16 . . 1.444(7) no