#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/61/2006125.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2006125 loop_ _publ_author_name 'Hu, Huai-Ming' 'Sun, Hong-Sui' 'Huang, Xiao-Ying' 'Chen, Xiao-Hua' 'Liu, Yonyjiang' 'You, Xiao-Zeng' _publ_section_title ; meso-5,5,7,12,12,14-Hexamethyl-1,4,8,11-tetraazacyclotetradecane Dihydroperchlorate Monohydrate ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 588 _journal_page_last 590 _journal_paper_doi 10.1107/S0108270196014667 _journal_volume 53 _journal_year 1997 _chemical_formula_iupac 'C16 H38 N4 2+, 2Cl O4 1-, H2 O1' _chemical_formula_sum 'C16 H40 Cl2 N4 O9' _chemical_formula_weight 503.42 _space_group_crystal_system monoclinic _space_group_IT_number 14 _space_group_name_Hall '-P 2ybc' _space_group_name_H-M_alt 'P 1 21/c 1' _atom_type_scat_source IntTabIV _cell_angle_alpha 90. _cell_angle_beta 98.34(2) _cell_angle_gamma 90. _cell_formula_units_Z 4 _cell_length_a 11.198(2) _cell_length_b 8.836(6) _cell_length_c 25.795(7) _cell_measurement_reflns_used 20 _cell_measurement_temperature 296 _cell_measurement_theta_max 16.00 _cell_measurement_theta_min 12.61 _cell_volume 2525.3(19) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'TEXSAN (Molecular Structure Corporation, 1987)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976) and PLUTO (Motherwell & Clegg, 1978)' _computing_structure_refinement TEXSAN _computing_structure_solution 'MITHRIL (Gilmore, 1983)' _diffrn_measurement_device 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.065 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 30 _diffrn_reflns_limit_l_min -30 _diffrn_reflns_number 4996 _diffrn_reflns_theta_max 25 _diffrn_standards_decay_% 5.3 _diffrn_standards_interval_count 400 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.303 _exptl_absorpt_correction_T_max 0.919 _exptl_absorpt_correction_T_min 0.869 _exptl_absorpt_correction_type 'empirical via \y scans (Molecular Structure Corporation, 1987)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.32 _exptl_crystal_density_meas ? _exptl_crystal_description rectangular _exptl_crystal_size_max 0.90 _exptl_crystal_size_mid 0.45 _exptl_crystal_size_min 0.28 _refine_diff_density_max 0.38 _refine_diff_density_min -0.31 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.76 _refine_ls_hydrogen_treatment 'H atoms not refined' _refine_ls_number_parameters 280 _refine_ls_number_reflns 3034 _refine_ls_R_factor_obs .061 _refine_ls_shift/esd_max 0.07 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/\s^2^(F)' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_obs .070 _reflns_number_observed 3034 _reflns_number_total 4891 _reflns_observed_criterion I>3\s(I) _cod_data_source_file kh1117.cif _cod_data_source_block I _cod_depositor_comments ; Updating space group information and adding the symmetry operation list. Antanas Vaitkus, 2018-06-15 The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'none' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'w = 1/\s^2^(F)' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/\s^2^(F)'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 2525(3) _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2006125 loop_ _space_group_symop_id _space_group_symop_operation_xyz 1 x,y,z 2 -x,y+1/2,-z+1/2 3 -x,-y,-z 4 x,-y+1/2,z+1/2 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 .0531(6) .0474(6) .0570(6) -.0058(5) .0098(4) .0019(5) Cl2 .0477(5) .0375(5) .0406(5) .0048(4) .0114(4) .0010(4) O1 .076(2) .074(2) .133(3) .014(2) .035(2) .047(2) O2 .077(2) .071(2) .113(2) .011(2) -.011(2) .021(2) O3 .152(4) .120(4) .087(3) -.005(3) .041(3) -.007(2) O4 .074(2) .083(2) .130(3) -.020(2) -.002(2) -.006(2) O5 .177(4) .069(2) .062(2) .032(2) .039(2) .022(2) O6 .168(4) .054(2) .080(2) -.009(2) .073(3) -.012(2) O7 .081(3) .192(5) .153(4) .048(3) .002(3) -.010(4) O8 .168(4) .075(2) .075(2) -.043(3) .035(2) -.018(2) O9 .103(3) .112(3) .085(3) .001(2) .035(2) -.009(2) N1 .0320(10) .0310(10) .0340(10) .0040(10) -.0030(10) .0040(10) N2 .0310(10) .040(2) .039(2) -.0040(10) .0040(10) -.0050(10) N3 .0310(10) .044(2) .0290(10) .0000(10) -.0020(10) .0010(10) N4 .0260(10) .0320(10) .0360(10) .0020(10) .0040(10) .0040(10) C1 .033(2) .036(2) .041(2) .0060(10) -.0060(10) -.0030(10) C2 .031(2) .040(2) .056(2) -.001(2) -.006(2) -.006(2) C3 .027(2) .047(2) .050(2) -.001(2) .0040(10) -.004(2) C4 .044(2) .042(2) .059(2) -.003(2) .010(2) .016(2) C5 .039(2) .054(2) .047(2) .003(2) .007(2) .011(2) C6 .033(2) .051(2) .030(2) .007(2) -.0050(10) -.0010(10) C7 .026(2) .055(2) .033(2) .004(2) .0020(10) .000(2) C8 .026(2) .047(2) .036(2) -.0030(10) .0040(10) -.0070(10) C9 .033(2) .039(2) .033(2) -.0020(10) -.0010(10) .0060(10) C10 .039(2) .047(2) .039(2) -.002(2) -.007(2) .012(2) C11 .058(2) .057(3) .048(2) -.011(2) -.009(2) -.004(2) C12 .041(2) .073(3) .070(3) -.015(2) .013(2) .000(2) C13 .037(2) .062(3) .068(3) .010(2) .007(2) -.008(2) C14 .046(2) .062(3) .063(3) .012(2) -.003(2) .012(2) C15 .049(2) .067(3) .047(2) .003(2) .002(2) -.015(2) C16 .035(2) .054(2) .067(3) -.011(2) .006(2) -.001(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z Cl1 .31083(9) .17070(10) .54800(4) Cl2 .83276(8) -.11300(10) .78730(3) O1 .2804(3) .0512(4) .5788(2) O2 .2126(3) .2742(4) .5404(2) O3 .3276(5) .1205(5) .4962(2) O4 .4177(3) .2438(4) .5702(2) O5 .8436(4) -.1843(4) .83620(10) O6 .8664(4) -.2070(4) .74820(10) O7 .7117(4) -.0724(8) .7732(2) O8 .8930(4) .0269(4) .79000(10) O9 .6231(4) .3036(5) 1.0052(2) N1 .7029(2) .3203(3) .79780(10) N2 .6327(2) .2407(3) .89490(10) N3 .8994(2) .2044(3) .89910(10) N4 .9151(2) .4870(3) .85380(10) C1 .5744(3) .3016(4) .77480(10) C2 .5129(3) .1907(4) .8076(2) C3 .5052(3) .2305(4) .86470(10) C4 .7004(3) .0990(4) .9092(2) C5 .8279(3) .1314(4) .93490(10) C6 1.0293(3) .2169(4) .92050(10) C7 1.0920(3) .3280(4) .88800(10) C8 1.0438(3) .4907(4) .88280(10) C9 .8971(3) .4513(4) .79700(10) C10 .7627(3) .4452(4) .77550(10) C11 .5574(4) .2504(5) .7181(2) C12 .4340(4) .1109(5) .8895(2) C13 .4488(3) .3856(5) .8692(2) C14 1.0938(3) .0651(5) .9242(2) C15 1.0344(4) .5629(5) .9356(2) C16 1.1226(3) .5869(4) .8522(2) H1 .6314 .2426 1.0320 H2 .6331 .4117 1.0141 H3 .7445 .2399 .7926 H4 .6702 .2884 .8790 H5 .6303 .2962 .9195 H6 .8931 .1591 .8804 H7 .8843 .4314 .8691 H8 .8921 .5821 .8569 H9 .5399 .3943 .7768 H10 .5468 .0986 .8060 H11 .4391 .1767 .7922 H12 .7016 .0394 .8754 H13 .6648 .0547 .9318 H14 .8610 .0340 .9460 H15 .8197 .2040 .9618 H16 1.0330 .2578 .9520 H17 1.0892 .2870 .8519 H18 1.1745 .3417 .9021 H19 .9325 .5308 .7802 H20 .9322 .3562 .7952 H21 .7294 .5380 .7831 H22 .7495 .4435 .7384 H23 .4784 .2413 .7086 H24 .5965 .1566 .7147 H25 .5871 .3102 .7013 H26 .3566 .1081 .8705 H27 .4272 .1443 .9230 H28 .4653 .0255 .8850 H29 .3713 .3968 .8467 H30 .4402 .4075 .9059 H31 .5002 .4543 .8554 H32 1.0961 .0273 .8917 H33 1.0608 -.0042 .9404 H34 1.1590 .0763 .9397 H35 .9741 .5128 .9536 H36 1.1061 .5631 .9539 H37 1.0031 .6520 .9295 H38 1.1341 .5280 .8157 H39 1.2004 .6000 .8764 H40 1.0862 .6855 .8434 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1 Cl1 O4 112.3(3) no O1 Cl1 O2 108.6(2) no O1 Cl1 O3 111.7(3) no O4 Cl1 O2 110.9(2) no O4 Cl1 O3 107.4(3) no O2 Cl1 O3 105.7(3) no O7 Cl2 O6 108.5(3) no O7 Cl2 O5 107.7(3) no O7 Cl2 O8 103.1(3) no O6 Cl2 O5 112.6(2) no O6 Cl2 O8 112.3(2) no O5 Cl2 O8 112.0(3) no C10 N1 C1 113.7(2) yes C4 N2 C3 119.0(3) yes C5 N3 C6 113.3(3) yes C9 N4 C8 118.2(2) yes N1 C1 C11 113.4(3) no N1 C1 C2 109.8(3) yes C11 C1 C2 110.0(3) no C1 C2 C3 118.8(3) yes C12 C3 C13 110.2(3) no C12 C3 N2 109.5(3) no C12 C3 C2 110.7(3) no C13 C3 N2 106.1(3) no C13 C3 C2 111.2(3) no N2 C3 C2 108.9(2) yes N2 C4 C5 111.5(3) yes N3 C5 C4 112.2(3) yes N3 C6 C14 112.9(3) no N3 C6 C7 110.3(3) yes C14 C6 C7 110.5(3) no C6 C7 C8 117.8(3) yes C15 C8 N4 105.4(2) no C15 C8 C16 110.6(3) no C15 C8 C7 112.5(3) no N4 C8 C16 109.5(3) no N4 C8 C7 108.7(2) yes C16 C8 C7 110.2(3) no N4 C9 C10 110.6(2) yes N1 C10 C9 111.6(3) yes H1 O9 H2 114.86 no H3 N1 C10 105.82 no H3 N1 C1 110.97 no H4 N2 H5 99.99 no H4 N2 C4 107.57 no H4 N2 C3 107.98 no H5 N2 C4 112.99 no H5 N2 C3 107.50 no H6 N3 C5 101.36 no H6 N3 C6 109.31 no H7 N4 H8 114.38 no H7 N4 C9 112.28 no H7 N4 C8 103.20 no H8 N4 C9 106.93 no H8 N4 C8 101.69 no H9 C1 N1 105.83 no H9 C1 C11 109.08 no H9 C1 C2 108.59 no H11 C2 H10 103.27 no H11 C2 C1 108.16 no H11 C2 C3 106.75 no H10 C2 C1 109.13 no H10 C2 C3 109.59 no H13 C4 H12 114.47 no H13 C4 N2 106.73 no H13 C4 C5 107.15 no H12 C4 N2 106.95 no H12 C4 C5 110.04 no H15 C5 H14 117.05 no H15 C5 N3 106.44 no H15 C5 C4 104.98 no H14 C5 N3 111.10 no H14 C5 C4 105.06 no H16 C6 N3 106.49 no H16 C6 C14 110.13 no H16 C6 C7 106.20 no H18 C7 H17 107.43 no H18 C7 C6 111.77 no H18 C7 C8 103.06 no H17 C7 C6 108.98 no H17 C7 C8 107.17 no H20 C9 H19 116.20 no H20 C9 N4 103.97 no H20 C9 C10 110.59 no H19 C9 N4 106.86 no H19 C9 C10 108.47 no H21 C10 H22 102.54 no H21 C10 N1 111.27 no H21 C10 C9 107.23 no H22 C10 N1 112.07 no H22 C10 C9 111.68 no H25 C11 H23 113.18 no H25 C11 H24 107.45 no H25 C11 C1 109.03 no H23 C11 H24 110.70 no H23 C11 C1 105.81 no H24 C11 C1 110.68 no H28 C12 H27 120.14 no H28 C12 H26 106.14 no H28 C12 C3 108.05 no H27 C12 H26 107.55 no H27 C12 C3 106.90 no H26 C12 C3 107.48 no H31 C13 H29 104.37 no H31 C13 H30 112.74 no H31 C13 C3 105.64 no H29 C13 H30 110.45 no H29 C13 C3 113.07 no H30 C13 C3 110.40 no H34 C14 H33 105.90 no H34 C14 H32 111.72 no H34 C14 C6 108.56 no H33 C14 H32 105.18 no H33 C14 C6 115.31 no H32 C14 C6 110.13 no H37 C15 H36 114.51 no H37 C15 H35 101.99 no H37 C15 C8 107.20 no H36 C15 H35 112.95 no H36 C15 C8 107.90 no H35 C15 C8 112.19 no H40 C16 H39 109.88 no H40 C16 H38 108.68 no H40 C16 C8 111.36 no H39 C16 H38 112.85 no H39 C16 C8 104.86 no H38 C16 C8 109.19 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cl1 O1 . . 1.394(3) no Cl1 O4 . . 1.405(4) no Cl1 O2 . . 1.423(4) no Cl1 O3 . . 1.445(4) no Cl2 O7 . . 1.399(4) no Cl2 O6 . . 1.399(3) no Cl2 O5 . . 1.399(3) no Cl2 O8 . . 1.404(4) no N1 C10 . . 1.452(4) yes N1 C1 . . 1.485(4) yes N2 C4 . . 1.484(5) yes N2 C3 . . 1.526(4) yes N3 C5 . . 1.457(4) yes N3 C6 . . 1.484(4) yes N4 C9 . . 1.483(4) yes N4 C8 . . 1.526(4) yes C1 C11 . . 1.517(5) no C1 C2 . . 1.523(5) yes C2 C3 . . 1.528(5) yes C3 C12 . . 1.520(5) no C3 C13 . . 1.520(5) no C4 C5 . . 1.510(5) yes C6 C14 . . 1.521(6) no C6 C7 . . 1.526(5) yes C7 C8 . . 1.535(5) yes C8 C15 . . 1.521(5) no C8 C16 . . 1.526(5) no C9 C10 . . 1.527(6) yes O9 H1 . . .871 no O9 H2 . . .984 no N1 H3 . . .871 no N2 H4 . . .756 no N2 H5 . . .805 no N3 H6 . . .622 no N4 H7 . . .746 no N4 H8 . . .886 no C1 H9 . . .910 no C2 H11 . . .872 no C2 H10 . . .902 no C4 H13 . . .848 no C4 H12 . . 1.020 no C5 H15 . . .959 no C5 H14 . . .965 no C6 H16 . . .885 no C7 H18 . . .950 no C7 H17 . . .995 no C9 H20 . . .932 no C9 H19 . . .942 no C10 H21 . . .934 no C10 H22 . . .945 no C11 H25 . . .786 no C11 H23 . . .887 no C11 H24 . . .947 no C12 H28 . . .847 no C12 H27 . . .927 no C12 H26 . . .932 no C13 H31 . . .941 no C13 H29 . . .977 no C13 H30 . . .986 no C14 H34 . . .786 no C14 H33 . . .855 no C14 H32 . . .906 no C15 H37 . . .868 no C15 H36 . . .870 no C15 H35 . . .979 no C16 H40 . . .976 no C16 H39 . . 1.002 no C16 H38 . . 1.100 no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139055487