#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2006226.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2006226 loop_ _publ_author_name 'Kolev, T.' 'Preut, H.' 'Bleckmann, P.' 'Radomirska, V.' _publ_contact_author ; Dr. Hans Preut Fachbereich Chemie Universit\"at Dortmund Otto-Hahn-Str. 6 44221 Dortmund Germany ; _publ_section_title ; Guanidinium Hydrogen Squarate ; _journal_issue 6 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 805 _journal_page_last 807 _journal_volume 53 _journal_year 1997 _chemical_formula_iupac 'C H6 N3 + , C4 H O4 -' _chemical_formula_sum 'C5 H7 N3 O4' _chemical_formula_weight 173.14 _chemical_melting_point 580 _chemical_name_common 'guanidinium hydrogen squarate' _chemical_name_systematic ; ? ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 102.97(4) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 8.960(4) _cell_length_b 20.536(11) _cell_length_c 8.146(4) _cell_measurement_reflns_used 20 _cell_measurement_temperature 291(2) _cell_measurement_theta_max 14.4 _cell_measurement_theta_min 7.2 _cell_volume 1460.6(13) _computing_cell_refinement 'Siemens R3m/V software' _computing_data_collection 'Siemens R3m/V software' _computing_data_reduction 'Siemens R3m/V software' _computing_molecular_graphics 'SHELXTL-Plus (Sheldrick, 1991)' _computing_publication_material 'SHELXL93, PARST95 (Nardelli, 1995)' _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 291(2) _diffrn_measurement_device 'Siemens R3m/V' _diffrn_measurement_method \w--2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0285 _diffrn_reflns_av_sigmaI/netI 0.0482 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -1 _diffrn_reflns_limit_k_max 1 _diffrn_reflns_limit_k_min -24 _diffrn_reflns_limit_l_max 9 _diffrn_reflns_limit_l_min -9 _diffrn_reflns_number 3302 _diffrn_reflns_theta_max 25.05 _diffrn_reflns_theta_min 1.98 _diffrn_standards_decay_% '< 5' _diffrn_standards_interval_count 300 _diffrn_standards_interval_time 150 _diffrn_standards_number 6 _exptl_absorpt_coefficient_mu 0.137 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.575 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description column _exptl_crystal_F_000 720 _exptl_crystal_size_max 1.18 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.26 _refine_diff_density_max 0.288 _refine_diff_density_min -0.239 _refine_ls_extinction_coef 0.010(3) _refine_ls_extinction_method SHELXL _refine_ls_goodness_of_fit_all 0.988 _refine_ls_goodness_of_fit_obs 1.171 _refine_ls_hydrogen_treatment refxyz _refine_ls_matrix_type full _refine_ls_number_parameters 260 _refine_ls_number_reflns 2588 _refine_ls_number_restraints 31 _refine_ls_restrained_S_all 1.191 _refine_ls_restrained_S_obs 1.164 _refine_ls_R_factor_all 0.0848 _refine_ls_R_factor_obs 0.0562 _refine_ls_shift/esd_max 0.000 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.1026P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.1983 _refine_ls_wR_factor_obs 0.1528 _reflns_number_observed 1681 _reflns_number_total 2588 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file jz1154.cif _[local]_cod_data_source_block nic412 _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_original_cell_volume 1460.6(12) _cod_database_code 2006226 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0414(13) 0.0296(11) 0.0363(11) -0.0006(10) -0.0014(10) -0.0061(9) O2 0.0344(12) 0.0317(12) 0.0452(12) 0.0058(10) -0.0038(10) -0.0062(9) O3 0.0455(14) 0.0346(12) 0.0374(12) -0.0007(10) -0.0007(11) -0.0087(9) O4 0.0394(13) 0.0374(12) 0.0440(13) 0.0134(11) 0.0003(11) -0.0009(10) O6 0.0481(15) 0.0305(12) 0.0615(15) 0.0098(11) 0.0220(12) 0.0010(10) O7 0.0414(14) 0.0284(11) 0.0614(14) 0.0009(10) 0.0244(12) 0.0013(10) O8 0.0367(13) 0.0329(12) 0.0654(15) 0.0026(10) 0.0210(12) -0.0090(10) O9 0.057(2) 0.0370(13) 0.078(2) -0.0135(12) 0.0346(14) -0.0061(12) C1 0.034(2) 0.0254(14) 0.0270(14) -0.0032(13) 0.0057(13) 0.0013(12) C2 0.031(2) 0.027(2) 0.0306(14) -0.0011(13) 0.0094(13) 0.0007(12) C3 0.030(2) 0.0273(15) 0.0294(14) -0.0016(13) 0.0092(13) -0.0014(12) C4 0.031(2) 0.031(2) 0.0279(14) 0.0028(13) 0.0064(13) 0.0006(12) C5 0.033(2) 0.037(2) 0.0300(15) -0.0010(14) 0.0057(14) 0.0026(13) N1 0.034(2) 0.055(2) 0.042(2) 0.001(2) -0.0032(14) -0.0016(14) N2 0.041(2) 0.037(2) 0.041(2) 0.0037(14) 0.0015(13) -0.0052(13) N3 0.040(2) 0.039(2) 0.048(2) 0.0055(14) -0.0028(14) -0.0086(13) C6 0.036(2) 0.031(2) 0.037(2) 0.0044(14) 0.0083(14) -0.0003(13) C7 0.028(2) 0.0272(15) 0.034(2) -0.0008(13) 0.0072(13) -0.0001(12) C8 0.028(2) 0.0264(15) 0.035(2) 0.0004(13) 0.0051(13) -0.0039(12) C9 0.038(2) 0.029(2) 0.039(2) -0.0037(14) 0.0099(15) -0.0033(13) C10 0.034(2) 0.037(2) 0.031(2) -0.0024(14) 0.0059(14) 0.0016(13) N4 0.042(2) 0.053(2) 0.056(2) -0.001(2) 0.0258(15) -0.007(2) N5 0.050(2) 0.034(2) 0.054(2) -0.0072(14) 0.0198(15) -0.0109(13) N6 0.048(2) 0.0318(15) 0.061(2) -0.0043(14) 0.023(2) -0.0079(13) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.3721(3) 0.57106(10) 0.1821(3) 0.0374(6) Uani d . 1 O O2 0.4363(2) 0.42710(10) 0.0942(3) 0.0391(6) Uani d D 1 O H2 0.426(4) 0.3833(15) 0.028(4) 0.059 Uiso d D 1 H O3 0.1183(3) 0.42354(10) -0.2034(3) 0.0408(6) Uani d . 1 O O4 0.0585(3) 0.57444(10) -0.1219(3) 0.0417(6) Uani d . 1 O O6 0.2905(3) 0.83976(10) 0.1866(3) 0.0452(6) Uani d . 1 O O7 0.2847(3) 0.68473(10) 0.1827(3) 0.0417(6) Uani d D 1 O H7 0.325(4) 0.6367(15) 0.177(5) 0.063 Uiso d D 1 H O8 0.5975(3) 0.68430(10) 0.0285(3) 0.0435(6) Uani d . 1 O O9 0.6000(3) 0.83815(11) 0.0298(3) 0.0541(7) Uani d . 1 O C1 0.2996(3) 0.53234(13) 0.0711(3) 0.0291(7) Uani d . 1 C C2 0.3255(3) 0.46721(13) 0.0301(3) 0.0292(7) Uani d . 1 C C3 0.1866(3) 0.46459(13) -0.1027(3) 0.0287(7) Uani d . 1 C C4 0.1585(3) 0.53415(14) -0.0638(3) 0.0300(7) Uani d . 1 C C5 0.2414(3) 0.50504(14) 0.4935(3) 0.0334(7) Uani d . 1 C N1 0.3702(3) 0.50831(15) 0.6127(4) 0.0453(7) Uani d D 1 N H1A 0.384(5) 0.5438(14) 0.671(5) 0.068 Uiso d D 1 H H1B 0.425(4) 0.4717(14) 0.628(5) 0.068 Uiso d D 1 H N2 0.2104(3) 0.45196(14) 0.3993(3) 0.0411(7) Uani d D 1 N H2A 0.124(3) 0.4487(19) 0.319(4) 0.062 Uiso d D 1 H H2B 0.275(4) 0.4204(15) 0.423(5) 0.062 Uiso d D 1 H N3 0.1454(3) 0.55463(14) 0.4721(4) 0.0444(7) Uani d D 1 N H3A 0.064(3) 0.5551(19) 0.390(4) 0.067 Uiso d D 1 H H3B 0.178(4) 0.5883(14) 0.531(4) 0.067 Uiso d D 1 H C6 0.3736(4) 0.79811(14) 0.1432(4) 0.0344(7) Uani d . 1 C C7 0.3759(3) 0.72780(13) 0.1393(4) 0.0298(7) Uani d . 1 C C8 0.5108(3) 0.72652(13) 0.0732(4) 0.0299(7) Uani d . 1 C C9 0.5144(4) 0.79789(14) 0.0738(4) 0.0351(7) Uani d . 1 C C10 0.0632(4) 0.24301(14) 0.6229(4) 0.0339(7) Uani d . 1 C N4 -0.0590(4) 0.2398(2) 0.6875(4) 0.0480(8) Uani d D 1 N H4A -0.105(4) 0.2019(14) 0.702(5) 0.072 Uiso d D 1 H H4B -0.099(4) 0.2744(15) 0.726(5) 0.072 Uiso d D 1 H N5 0.1399(4) 0.29836(13) 0.6236(4) 0.0447(7) Uani d D 1 N H5A 0.123(5) 0.3346(14) 0.681(4) 0.067 Uiso d D 1 H H5B 0.216(4) 0.2964(19) 0.574(5) 0.067 Uiso d D 1 H N6 0.1080(4) 0.19036(13) 0.5533(4) 0.0451(8) Uani d D 1 N H6A 0.054(4) 0.1543(14) 0.547(5) 0.068 Uiso d D 1 H H6B 0.193(4) 0.1864(18) 0.515(5) 0.068 Uiso d D 1 H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 O1 H7 118.5(16) ? C2 O2 H2 111(2) ? C7 O7 H7 112(2) ? O1 C1 C2 132.7(3) y O1 C1 C4 136.9(3) y C2 C1 C4 90.4(2) y O2 C2 C1 130.9(3) y O2 C2 C3 136.1(3) y C1 C2 C3 93.0(2) y O3 C3 C2 136.9(3) y O3 C3 C4 135.2(3) y C2 C3 C4 87.9(2) y O4 C4 C1 136.8(3) y O4 C4 C3 134.5(3) y C1 C4 C3 88.7(2) y N3 C5 N2 120.8(3) ? N3 C5 N1 119.3(3) ? N2 C5 N1 119.8(3) ? C5 N1 H1A 116.(3) ? C5 N1 H1B 115.(3) ? H1A N1 H1B 129.(4) ? C5 N2 H2A 121.(3) ? C5 N2 H2B 117.(3) ? H2A N2 H2B 122.(4) ? C5 N3 H3A 121.(3) ? C5 N3 H3B 115.(3) ? H3A N3 H3B 123.(4) ? O6 C6 C7 135.3(3) y O6 C6 C9 136.4(3) y C7 C6 C9 88.3(2) y O7 C7 C8 136.3(3) y O7 C7 C6 131.2(3) y C8 C7 C6 92.5(2) y O8 C8 C7 138.1(3) y O8 C8 C9 131.9(3) y C7 C8 C9 90.0(2) y O9 C9 C8 133.1(3) y O9 C9 C6 137.8(3) y C8 C9 C6 89.1(2) y N4 C10 N6 119.3(3) ? N4 C10 N5 121.1(3) ? N6 C10 N5 119.6(3) ? C10 N4 H4A 123.(3) ? C10 N4 H4B 123.(3) ? H4A N4 H4B 115.(4) ? C10 N5 H5A 124.(3) ? C10 N5 H5B 115.(3) ? H5A N5 H5B 121.(4) ? C10 N6 H6A 120.(3) ? C10 N6 H6B 126.(3) ? H6A N6 H6B 114.(4) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C1 1.268(3) y O1 H7 1.41(3) ? O2 C2 1.305(4) y O2 H2 1.04(3) ? O3 C3 1.238(3) y O4 C4 1.233(3) y O6 C6 1.237(3) y O7 C7 1.306(3) y O7 H7 1.06(3) ? O8 C8 1.271(3) y O9 C9 1.234(4) y C1 C2 1.410(4) y C1 C4 1.478(4) y C2 C3 1.456(4) y C3 C4 1.497(4) y C5 N3 1.319(4) ? C5 N2 1.326(4) ? C5 N1 1.332(4) ? N1 H1A 0.86(2) ? N1 H1B 0.89(2) ? N2 H2A 0.89(2) ? N2 H2B 0.86(2) ? N3 H3A 0.87(2) ? N3 H3B 0.85(2) ? C6 C7 1.444(4) y C6 C9 1.494(4) y C7 C8 1.430(4) y C8 C9 1.466(4) y C10 N4 1.318(4) ? C10 N6 1.324(4) ? C10 N5 1.328(4) ? N4 H4A 0.90(2) ? N4 H4B 0.88(2) ? N5 H5A 0.91(2) ? N5 H5B 0.86(2) ? N6 H6A 0.88(2) ? N6 H6B 0.89(2) ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion O1 C1 C2 O2 -1.5(5) C4 C1 C2 O2 179.1(3) O1 C1 C2 C3 178.3(3) C4 C1 C2 C3 -1.1(2) O2 C2 C3 O3 1.7(6) C1 C2 C3 O3 -178.0(3) O2 C2 C3 C4 -179.1(3) C1 C2 C3 C4 1.1(2) O1 C1 C4 O4 1.6(6) C2 C1 C4 O4 -179.1(4) O1 C1 C4 C3 -178.3(3) C2 C1 C4 C3 1.1(2) O3 C3 C4 O4 -1.7(6) C2 C3 C4 O4 179.1(3) O3 C3 C4 C1 178.1(3) C2 C3 C4 C1 -1.1(2) O6 C6 C7 O7 0.3(6) C9 C6 C7 O7 179.9(3) O6 C6 C7 C8 -179.5(4) C9 C6 C7 C8 0.1(2) O7 C7 C8 O8 0.5(7) C6 C7 C8 O8 -179.7(4) O7 C7 C8 C9 -179.9(4) C6 C7 C8 C9 -0.1(2) O8 C8 C9 O9 1.1(6) C7 C8 C9 O9 -178.5(4) O8 C8 C9 C6 179.7(3) C7 C8 C9 C6 0.1(2) O6 C6 C9 O9 -2.0(7) C7 C6 C9 O9 178.4(4) O6 C6 C9 C8 179.5(4) C7 C6 C9 C8 -0.1(2)