#------------------------------------------------------------------------------ #$Date: 2015-01-23 12:30:19 +0000 (Fri, 23 Jan 2015) $ #$Revision: 130086 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/63/2006319.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2006319 loop_ _publ_author_name 'Ng, Seik Weng' _publ_section_title ; Bis(dicyclohexylammonium) 2,6-Pyridinedicarboxylate Dihydrate ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 986 _journal_page_last 987 _journal_paper_doi 10.1107/S010827019700293X _journal_volume 53 _journal_year 1997 _chemical_formula_iupac '2C12 H24 N + , C7 H3 N O4 2- , 2H2 O' _chemical_formula_moiety '2[C~12~H~24~N] [C~7~H3~NO~4~] 2OH~2~' _chemical_formula_sum 'C31 H55 N3 O6' _chemical_formula_weight 565.78 _chemical_name_systematic ; Bis(dicyclohexylammonium) 2,6-pyridinedicarboxylate dihydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 106.044(6) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.5790(10) _cell_length_b 18.1356(9) _cell_length_c 17.507(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 298(2) _cell_measurement_theta_max 11 _cell_measurement_theta_min 10 _cell_volume 3228.0(5) _computing_cell_refinement 'CAD4-VAX/PC (Enraf-Nonius Delft, 1988)' _computing_data_collection 'CAD4-VAX/PC (Enraf-Nonius Delft, 1988)' _computing_data_reduction 'NRCVAX (Gabe, Le Page, Charland, Lee & White, 1989)' _computing_molecular_graphics 'ZORTEP (Zsolnai & Pritzkow, 1996)' _computing_publication_material SHELXL93 _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 298(2) _diffrn_measurement_device 'Enraf-Nonius CAD4' _diffrn_measurement_method \w-scans _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0181 _diffrn_reflns_av_sigmaI/netI 0.0387 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 21 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 5858 _diffrn_reflns_theta_max 24.97 _diffrn_reflns_theta_min 1.65 _diffrn_standards_decay_% none _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.080 _exptl_absorpt_correction_T_max 0.958 _exptl_absorpt_correction_T_min 0.922 _exptl_absorpt_correction_type '\y-scan (North, Phillips & Mathews, 1968)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.164 _exptl_crystal_density_meas ? _exptl_crystal_description 'irregular block' _exptl_crystal_F_000 1240 _exptl_crystal_size_max 0.53 _exptl_crystal_size_mid 0.53 _exptl_crystal_size_min 0.53 _refine_diff_density_max 0.370 _refine_diff_density_min -0.267 _refine_ls_extinction_coef 'not refined' _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.107 _refine_ls_goodness_of_fit_obs 1.317 _refine_ls_hydrogen_treatment ;H atoms: riding model with U(H) = 1.5U~eq~(C,N); water H-atoms were calculated, U = 0.10 \%A^2^ ; _refine_ls_matrix_type full _refine_ls_number_parameters 370 _refine_ls_number_reflns 5664 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.107 _refine_ls_restrained_S_obs 1.317 _refine_ls_R_factor_all 0.1082 _refine_ls_R_factor_obs .0672 _refine_ls_shift/esd_max 0.000 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w=1/[\s^2^(Fo^2^)+(0.1P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.1953 _refine_ls_wR_factor_obs .1748 _reflns_number_observed 3326 _reflns_number_total 5664 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file kh1129.cif _[local]_cod_data_source_block ipt156 _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas ; _cod_original_cell_volume 3228.1(6) _cod_database_code 2006319 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0440(10) .084(2) .0690(10) -.0080(10) .0210(10) .0070(10) O2 .0370(10) .235(4) .155(3) .035(2) .028(2) .093(3) O3 .0410(10) .088(2) .0600(10) .0080(10) .0110(10) .0230(10) O4 .0400(10) .101(2) .0660(10) .0050(10) .0210(10) .0050(10) O5 .083(4) .127(5) .117(5) .022(4) .039(3) .052(4) O5' .067(3) .204(7) .059(3) -.022(4) .019(2) .024(4) O6 .146(3) .249(5) .133(3) -.090(3) -.002(2) .047(3) N1 .0370(10) .0490(10) .0470(10) .0010(10) .0110(10) .0050(10) N2 .0450(10) .0520(10) .0490(10) .0030(10) .0110(10) .0110(10) N3 .0340(10) .0500(10) .0470(10) .0020(10) .0090(10) .0060(10) C1 .0390(10) .044(2) .055(2) .0030(10) .0100(10) .0010(10) C2 .077(2) .072(2) .063(2) -.009(2) .032(2) -.012(2) C3 .103(3) .072(2) .086(3) -.008(2) .041(2) -.023(2) C4 .084(2) .057(2) .093(3) -.013(2) .018(2) -.016(2) C5 .077(2) .051(2) .084(2) -.011(2) .019(2) .005(2) C6 .066(2) .053(2) .065(2) -.0070(10) .030(2) .0000(10) C7 .0420(10) .048(2) .052(2) -.0050(10) .0130(10) -.0010(10) C8 .061(2) .050(2) .068(2) .0030(10) .013(2) .000(2) C9 .087(3) .059(2) .093(3) -.008(2) .033(2) -.018(2) C10 .125(4) .081(3) .071(2) -.010(2) .005(2) -.023(2) C11 .156(4) .083(3) .059(2) .007(3) -.006(2) -.006(2) C12 .078(2) .062(2) .059(2) .007(2) -.006(2) .002(2) C13 .052(2) .050(2) .073(2) .0030(10) .011(2) .007(2) C14 .099(3) .064(2) .087(3) -.016(2) .015(2) -.018(2) C15 .094(3) .083(3) .139(4) -.017(2) .021(3) -.034(3) C16 .097(3) .069(3) .210(6) -.004(2) .036(4) -.017(3) C17 .222(6) .052(3) .213(6) .014(3) .122(6) .042(3) C18 .140(4) .060(2) .162(4) .006(2) .093(4) .029(2) C19 .058(2) .060(2) .044(2) .0110(10) .0140(10) .0080(10) C20 .068(2) .067(2) .062(2) .017(2) .004(2) .001(2) C21 .091(3) .087(3) .079(2) .027(2) .008(2) -.020(2) C22 .087(3) .104(3) .076(2) .011(2) .003(2) -.027(2) C23 .087(3) .120(3) .053(2) .038(2) -.004(2) -.012(2) C24 .066(2) .087(2) .051(2) .025(2) .003(2) -.002(2) C25 .037(2) .088(2) .068(2) -.003(2) .010(2) .013(2) C26 .0360(10) .054(2) .051(2) .0010(10) .0080(10) .0020(10) C27 .045(2) .058(2) .055(2) .0070(10) .0010(10) .0080(10) C28 .065(2) .051(2) .050(2) .0030(10) .013(2) .0120(10) C29 .052(2) .050(2) .054(2) -.0020(10) .0180(10) .0030(10) C30 .0390(10) .041(2) .0440(10) -.0030(10) .0120(10) .0000(10) C31 .0340(10) .051(2) .051(2) -.0020(10) .0110(10) -.0030(10) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol O1 .5831(2) .20820(10) -.22720(10) .0643(6) Uani d . 1 . O O2 .7142(2) .1375(2) -.1400(2) .142(2) Uani d . 1 . O O3 .1320(2) .21090(10) -.25160(10) .0634(6) Uani d . 1 . O O4 .0524(2) .18320(10) -.15190(10) .0676(6) Uani d . 1 . O O5 -.0546(6) .0927(4) -.0577(4) .107(2) Uani d P .50 . O H51 -.0256 .1109 -.1023 .100 Uiso d P .50 . H H52 -.1160 .1289 -.0448 .100 Uiso d P .50 . H O5' -.0579(5) .1599(5) -.0314(3) .110(2) Uani d P .50 . O H51' -.0351 .1877 -.0733 .100 Uiso d P .50 . H H52' -.1131 .1888 -.0048 .100 Uiso d P .50 . H O6 .1419(4) .0551(3) .0688(2) .184(2) Uani d . 1 . O H61 .0732 .0748 .0227 .100 Uiso d . 1 . H H62 .1200 .0018 .0704 .100 Uiso d . 1 . H N1 .8224(2) .24510(10) -.26540(10) .0443(5) Uani d . 1 . N H1A .8963(2) .22810(10) -.23080(10) .066 Uiso calc R 1 . H H1B .7541(2) .22970(10) -.24830(10) .066 Uiso calc R 1 . H N2 .3280(2) .25800(10) -.31230(10) .0489(6) Uani d . 1 . N H2A .2765(2) .23680(10) -.28540(10) .073 Uiso calc R 1 . H H2B .4115(2) .24560(10) -.28710(10) .073 Uiso calc R 1 . H N3 .3765(2) .17110(10) -.16980(10) .0442(5) Uani d . 1 . N C1 .8256(2) .32760(10) -.2624(2) .0467(6) Uani d . 1 . C H1 .7404(2) .34630(10) -.2943(2) .070 Uiso calc R 1 . H C2 .8445(3) .3511(2) -.1771(2) .0682(9) Uani d . 1 . C H2C .9263(3) .3309(2) -.1441(2) .102 Uiso calc R 1 . H H2D .7732(3) .3318(2) -.1581(2) .102 Uiso calc R 1 . H C3 .8476(4) .4351(2) -.1703(2) .0840(10) Uani d . 1 . C H3A .7628(4) .4549(2) -.1993(2) .126 Uiso calc R 1 . H H3B .8639(4) .4490(2) -.1149(2) .126 Uiso calc R 1 . H C4 .9538(4) .4677(2) -.2031(2) .0790(10) Uani d . 1 . C H4A .9499(4) .5211(2) -.2012(2) .119 Uiso calc R 1 . H H4B 1.0395(4) .4523(2) -.1704(2) .119 Uiso calc R 1 . H C5 .9367(3) .4433(2) -.2874(2) .0713(9) Uani d . 1 . C H5A 1.0090(3) .4621(2) -.3058(2) .107 Uiso calc R 1 . H H5B .8558(3) .4640(2) -.3211(2) .107 Uiso calc R 1 . H C6 .9320(3) .3593(2) -.2953(2) .0589(8) Uani d . 1 . C H6A .9148(3) .3458(2) -.3509(2) .088 Uiso calc R 1 . H H6B 1.0165(3) .3388(2) -.2668(2) .088 Uiso calc R 1 . H C7 .8110(2) .21010(10) -.3444(2) .0472(6) Uani d . 1 . C H7 .8878(2) .22490(10) -.3618(2) .071 Uiso calc R 1 . H C8 .8146(3) .1276(2) -.3351(2) .0608(8) Uani d . 1 . C H8A .7401(3) .1115(2) -.3172(2) .091 Uiso calc R 1 . H H8B .8945(3) .1132(2) -.2954(2) .091 Uiso calc R 1 . H C9 .8099(4) .0911(2) -.4143(2) .0780(10) Uani d . 1 . C H9A .8881(4) .1043(2) -.4298(2) .117 Uiso calc R 1 . H H9B .8094(4) .0379(2) -.4081(2) .117 Uiso calc R 1 . H C10 .6899(5) .1142(2) -.4784(2) .0970(10) Uani d . 1 . C H10A .6114(5) .0969(2) -.4656(2) .145 Uiso calc R 1 . H H10B .6919(5) .0923(2) -.5286(2) .145 Uiso calc R 1 . H C11 .6852(5) .1977(2) -.4862(2) .107(2) Uani d . 1 . C H11A .6050(5) .2121(2) -.5257(2) .160 Uiso calc R 1 . H H11B .7592(5) .2144(2) -.5043(2) .160 Uiso calc R 1 . H C12 .6901(3) .2347(2) -.4066(2) .0713(9) Uani d . 1 . C H12A .6912(3) .2878(2) -.4123(2) .107 Uiso calc R 1 . H H12B .6123(3) .2215(2) -.3905(2) .107 Uiso calc R 1 . H C13 .3160(3) .3395(2) -.3050(2) .0598(8) Uani d . 1 . C H13 .2237(3) .3527(2) -.3290(2) .090 Uiso calc R 1 . H C14 .3492(4) .3589(2) -.2177(2) .0850(10) Uani d . 1 . C H14A .4388(4) .3440(2) -.1918(2) .128 Uiso calc R 1 . H H14B .2912(4) .3322(2) -.1932(2) .128 Uiso calc R 1 . H C15 .3349(4) .4416(2) -.2057(3) .1080(10) Uani d . 1 . C H15A .2434(4) .4557(2) -.2265(3) .161 Uiso calc R 1 . H H15B .3619(4) .4528(2) -.1493(3) .161 Uiso calc R 1 . H C16 .4154(5) .4841(2) -.2460(4) .126(2) Uani d . 1 . C H16A .5077(5) .4745(2) -.2207(4) .190 Uiso calc R 1 . H H16B .3998(5) .5363(2) -.2407(4) .190 Uiso calc R 1 . H C17 .3848(7) .4649(2) -.3328(4) .150(2) Uani d . 1 . C H17A .4447(7) .4914(2) -.3561(4) .225 Uiso calc R 1 . H H17B .2962(7) .4810(2) -.3594(4) .225 Uiso calc R 1 . H C18 .3964(5) .3810(2) -.3474(3) .110(2) Uani d . 1 . C H18A .3660(5) .3706(2) -.4039(3) .166 Uiso calc R 1 . H H18B .4877(5) .3657(2) -.3284(3) .166 Uiso calc R 1 . H C19 .2950(3) .2233(2) -.3932(2) .0538(7) Uani d . 1 . C H19 .3486(3) .2463(2) -.4242(2) .081 Uiso calc R 1 . H C20 .3290(3) .1424(2) -.3829(2) .0686(9) Uani d . 1 . C H20A .2807(3) .1198(2) -.3493(2) .103 Uiso calc R 1 . H H20B .4222(3) .1368(2) -.3571(2) .103 Uiso calc R 1 . H C21 .2946(4) .1039(2) -.4632(2) .0890(10) Uani d . 1 . C H21A .3484(4) .1238(2) -.4951(2) .133 Uiso calc R 1 . H H21B .3136(4) .0517(2) -.4555(2) .133 Uiso calc R 1 . H C22 .1504(4) .1145(2) -.5065(2) .0930(10) Uani d . 1 . C H22A .1316(4) .0917(2) -.5586(2) .139 Uiso calc R 1 . H H22B .0967(4) .0904(2) -.4770(2) .139 Uiso calc R 1 . H C23 .1161(4) .1944(2) -.5156(2) .0920(10) Uani d . 1 . C H23A .0226(4) .1995(2) -.5409(2) .138 Uiso calc R 1 . H H23B .1629(4) .2171(2) -.5499(2) .138 Uiso calc R 1 . H C24 .1506(3) .2342(2) -.4363(2) .0706(9) Uani d . 1 . C H24A .0969(3) .2153(2) -.4039(2) .106 Uiso calc R 1 . H H24B .1323(3) .2864(2) -.4449(2) .106 Uiso calc R 1 . H C25 .6069(3) .1650(2) -.1696(2) .0653(9) Uani d . 1 . C C26 .4967(2) .1459(2) -.1330(2) .0479(7) Uani d . 1 . C C27 .5216(3) .1055(2) -.0632(2) .0556(7) Uani d . 1 . C H27 .6052(3) .0869(2) -.0396(2) .083 Uiso calc R 1 . H C28 .4211(3) .0934(2) -.0294(2) .0561(7) Uani d . 1 . C H28 .4361(3) .0670(2) .0178(2) .084 Uiso calc R 1 . H C29 .2975(3) .1207(2) -.0660(2) .0518(7) Uani d . 1 . C H29 .2286(3) .1142(2) -.0433(2) .078 Uiso calc R 1 . H C30 .2782(2) .15800(10) -.1372(2) .0408(6) Uani d . 1 . C C31 .1433(2) .1863(2) -.1842(2) .0455(6) Uani d . 1 . C loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 N1 C7 116.8(2) yes C13 N2 C19 119.6(2) yes C26 N3 C30 118.7(2) yes N1 C1 C2 108.2(2) yes N1 C1 C6 112.2(2) yes C2 C1 C6 111.1(2) ? C1 C2 C3 110.6(3) ? C2 C3 C4 111.2(3) ? C3 C4 C5 110.9(3) ? C4 C5 C6 112.0(3) ? C1 C6 C5 110.7(2) ? N1 C7 C8 109.1(2) yes N1 C7 C12 112.3(2) yes C12 C7 C8 111.4(2) ? C7 C8 C9 109.9(3) ? C8 C9 C10 111.5(3) ? C9 C10 C11 110.2(3) ? C10 C11 C12 111.2(3) ? C7 C12 C11 109.7(3) ? N2 C13 C14 108.5(2) yes N2 C13 C18 112.7(3) yes C18 C13 C14 112.6(3) ? C13 C14 C15 111.4(3) ? C14 C15 C16 110.9(4) ? C15 C16 C17 111.9(4) ? C16 C17 C18 112.9(4) ? C13 C18 C17 109.4(3) ? N2 C19 C20 108.1(2) yes N2 C19 C24 110.8(2) yes C20 C19 C24 111.1(3) ? C19 C20 C21 110.4(3) ? C20 C21 C22 110.8(3) ? C21 C22 C23 110.9(3) ? C22 C23 C24 112.0(3) ? C23 C24 C19 110.4(3) ? O1 C25 O2 124.0(3) yes O1 C25 C26 118.6(3) yes O2 C25 C26 117.5(3) yes N3 C26 C25 117.2(2) yes N3 C26 C27 122.0(2) yes C25 C26 C27 120.8(2) ? C26 C27 C28 119.0(3) ? C27 C28 C29 119.4(3) ? C28 C29 C30 118.6(3) ? N3 C30 C29 122.2(2) yes N3 C30 C31 115.5(2) yes C29 C30 C31 122.3(2) ? O3 C31 O4 124.6(2) yes O3 C31 C30 117.8(2) yes O4 C31 C30 117.7(2) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C25 . 1.246(4) yes O2 C25 . 1.217(4) yes O3 C31 . 1.235(3) yes O4 C31 . 1.245(3) yes N1 C1 . 1.499(3) yes N1 C7 . 1.496(3) yes N2 C13 . 1.493(3) yes N2 C19 . 1.499(3) yes N3 C26 . 1.337(3) yes N3 C30 . 1.339(3) yes C1 C2 . 1.511(4) ? C1 C6 . 1.513(4) ? C2 C3 . 1.528(4) ? C3 C4 . 1.516(5) ? C4 C5 . 1.503(4) ? C5 C6 . 1.529(4) ? C7 C8 . 1.505(4) ? C7 C12 . 1.500(4) ? C8 C9 . 1.524(4) ? C9 C10 . 1.504(5) ? C10 C11 . 1.519(5) ? C11 C12 . 1.536(5) ? C13 C14 . 1.511(5) ? C13 C18 . 1.481(5) ? C14 C15 . 1.527(5) ? C15 C16 . 1.467(6) ? C16 C17 . 1.504(7) ? C17 C18 . 1.553(6) ? C19 C20 . 1.508(4) ? C19 C24 . 1.518(4) ? C20 C21 . 1.521(4) ? C21 C22 . 1.517(5) ? C22 C23 . 1.491(5) ? C23 C24 . 1.517(4) ? C25 C26 . 1.518(4) ? C26 C27 . 1.386(4) ? C27 C28 . 1.368(4) ? C28 C29 . 1.380(4) ? C29 C30 . 1.382(4) ? C30 C31 . 1.526(3) ? N1 O1 . 2.871(3) yes N1 O4 1_655 2.908(3) yes N2 O1 . 2.846(3) yes N2 O3 . 2.717(3) yes O5 O2 1_455 2.602(6) yes O5 O4 . 2.778(6) yes O5 O6 . 2.674(7) yes O5' O2 1_455 2.656(6) yes O5' O4 . 2.710(5) yes O6 O5 3_555 2.825(9) yes