#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/65/2006587.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2006587 loop_ _publ_author_name 'George, Clifford' 'Purdy, Andrew P.' _publ_section_title ; Tetrakis(ethylenediamine)yttrium(III) Hydrosulfide Iodide ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1381 _journal_page_last 1383 _journal_paper_doi 10.1107/S010827019700749X _journal_volume 53 _journal_year 1997 _chemical_formula_analytical Y(H2NCH2CH2NH2)4(SH)2.72(I)0.28 _chemical_formula_iupac '[Y(C2 H8 N2)4] (SH)2.72 I0.28' _chemical_formula_sum 'C8 H34.72 I0.28 N8 S2.72 Y' _chemical_formula_weight 451.99 _chemical_name_common ; tetrakis(ethylenediamine)yttrium (2.75)hydrosulfide 0.25Iodine ; _chemical_name_systematic ; tetrakis(ethylenediamine)yttrium (2.75)hydrosulfide 0.25Iodine ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXTL _cell_angle_alpha 90.00 _cell_angle_beta 107.80(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.029(2) _cell_length_b 15.416(3) _cell_length_c 14.695(3) _cell_measurement_reflns_used 40 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 12.25 _cell_measurement_theta_min 3.00 _cell_volume 1947.5(8) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1994)' _computing_data_reduction XSCANS _computing_molecular_graphics SHELXTL-Plus _computing_publication_material SHELXTL-Plus _computing_structure_refinement SHELXTL-Plus _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Siemens P4' _diffrn_measurement_method \q/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.024 _diffrn_reflns_av_sigmaI/netI 0.0598 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -1 _diffrn_reflns_limit_k_max 18 _diffrn_reflns_limit_k_min -1 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 2288 _diffrn_reflns_theta_max 25 _diffrn_reflns_theta_min 2.64 _diffrn_standards_decay_% 4.1 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 3.690 _exptl_absorpt_correction_T_max 0.38 _exptl_absorpt_correction_T_min 0.30 _exptl_absorpt_correction_type 'empirical \y scans (SHELXTL-Plus; Sheldrick, 1994)' _exptl_crystal_colour 'clear colorless' _exptl_crystal_density_diffrn 1.542 _exptl_crystal_density_method 'not measured' _exptl_crystal_description irregular _exptl_crystal_F_000 940 _exptl_crystal_size_max 0.38 _exptl_crystal_size_mid 0.32 _exptl_crystal_size_min 0.26 _refine_diff_density_max 0.735 _refine_diff_density_min -0.573 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.055 _refine_ls_goodness_of_fit_obs 1.094 _refine_ls_hydrogen_treatment 'H atoms riding' _refine_ls_matrix_type full _refine_ls_number_parameters 99 _refine_ls_number_reflns 1701 _refine_ls_number_restraints 2 _refine_ls_restrained_S_all 1.054 _refine_ls_restrained_S_obs 1.094 _refine_ls_R_factor_all 0.068 _refine_ls_R_factor_obs .044 _refine_ls_shift/esd_max 0.090 _refine_ls_shift/esd_mean 0.005 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0419P)^2^+6.0039P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.105 _refine_ls_wR_factor_obs .095 _reflns_number_observed 1327 _reflns_number_total 1701 _reflns_observed_criterion >2sigma(I) _cod_data_source_file fr1053.cif _cod_data_source_block pur47mo _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_bond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). '_geom_angle_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (7 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0419P)^2^+6.0039P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0419P)^2^+6.0039P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 1947.5(7) _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2006587 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y, -z+1/2' 'x+1/2, y+1/2, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y, z-1/2' '-x+1/2, -y+1/2, -z' 'x+1/2, -y+1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Y1 .0282(4) .0159(3) .0170(3) .000 .0066(3) .000 N1 .048(3) .023(2) .027(2) -.010(2) .012(2) .000(2) C1 .033(3) .043(3) .041(3) -.006(3) .001(3) .000(3) C2 .040(3) .040(3) .033(3) .006(3) .000(3) .011(3) N2 .037(2) .023(2) .030(2) .001(2) .008(2) .005(2) N1' .052(3) .026(2) .031(2) -.005(2) .019(2) -.001(2) C1' .051(3) .032(3) .032(3) -.013(3) .017(3) .002(2) C2' .045(3) .052(3) .043(3) .002(3) .025(3) .008(3) N2' .054(3) .025(2) .034(2) .006(2) .022(2) .004(2) S1 .0404(8) .0319(7) .0787(10) .000 .0208(7) .000 I1 .0404(8) .0319(7) .0787(10) .000 .0208(7) .000 S2 .0462(8) .0327(8) .0323(7) -.0107(7) .0122(6) .0027(6) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol Y1 .5000 .63441(4) 0.25 .0205(2) Uani d S 1 . Y N1 .7025(5) .6724(3) 0.4022(3) .0325(10) Uani d . 1 . N H1C .7427(5) .7246(3) 0.3959(3) .039 Uiso calc R 1 . H H1D .6577(5) .6765(3) 0.4490(3) .039 Uiso calc R 1 . H C1 .8290(6) .6084(4) 0.4302(4) .0415(15) Uani d . 1 . C H1A .8953(6) .6203(4) 0.4946(4) .050 Uiso calc R 1 . H H1B .8919(6) .6118(4) 0.3874(4) .050 Uiso calc R 1 . H C2 .7592(7) .5185(4) 0.4258(4) .0400(14) Uani d . 1 . C H2A .8412(7) .4753(4) 0.4404(4) .048 Uiso calc R 1 . H H2B .7039(7) .5136(4) 0.4727(4) .048 Uiso calc R 1 . H N2 .6513(5) .5031(3) 0.3293(3) .0305(10) Uani d . 1 . N H2C .5835(5) .4615(3) 0.3331(3) .037 Uiso calc R 1 . H H2D .7061(5) .4828(3) 0.2920(3) .037 Uiso calc R 1 . H N1' .6267(5) .7649(3) 0.2023(3) .0350(11) Uani d . 1 . N H1'C .5570(5) .8084(3) 0.1883(3) .080 Uiso calc R 1 . H H1'D .7061(5) .7817(3) 0.2530(3) .080 Uiso calc R 1 . H C1' .6862(7) .7528(3) 0.1212(4) .0373(13) Uani d . 1 . C H1'A .7618(7) .7975(3) 0.1214(4) .045 Uiso calc R 1 . H H1'B .6016(7) .7571(3) 0.0618(4) .045 Uiso calc R 1 . H C2' .7609(7) .6652(4) 0.1284(4) .0440(15) Uani d . 1 . C H2'A .7932(7) .6546(4) 0.0722(4) .053 Uiso calc R 1 . H H2'B .8526(7) .6632(4) 0.1841(4) .053 Uiso calc R 1 . H N2' .6495(5) .5975(3) 0.1363(3) .0356(11) Uani d . 1 . N H2'C .7019(5) .5477(3) 0.1556(3) .043 Uiso calc R 1 . H H2'D .5815(5) .5881(3) 0.0780(3) .043 Uiso calc R 1 . H S1 1 .47525(8) 0.25 .0497(5) Uani d SPD .722(3) . S I1 1 .47525(8) 0.25 .0497(5) Uani d SP .278(3) . I H1S 1.106(2) .473(12) 0.2420(38) .080 Uiso d PD .3610(14) . H S2 .4160(2) .35534(9) 0.39556(9) .0370(4) Uani d D 1 . S H2S .511(2) .376(4) 0.3815(33) .080 Uiso d D 1 . H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.3639 0.7018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag N1 Y1 N1 . 2_655 152.8(2) y N1 Y1 N2' . . 104.76(15) ? N1 Y1 N2' 2_655 . 81.48(14) ? N1 Y1 N2' . 2_655 81.48(14) ? N1 Y1 N2' 2_655 2_655 104.76(15) ? N2' Y1 N2' . 2_655 153.8(2) ? N1 Y1 N1' . . 77.93(14) y N1 Y1 N1' 2_655 . 80.40(14) y N2' Y1 N1' . . 67.28(14) ? N2' Y1 N1' 2_655 . 138.45(13) ? N1 Y1 N1' . 2_655 80.40(14) ? N1 Y1 N1' 2_655 2_655 77.93(14) ? N2' Y1 N1' . 2_655 138.45(13) ? N2' Y1 N1' 2_655 2_655 67.28(14) ? N1' Y1 N1' . 2_655 73.9(2) ? N1 Y1 N2 . 2_655 138.63(13) y N1 Y1 N2 2_655 2_655 68.13(13) y N2' Y1 N2 . 2_655 80.55(14) ? N2' Y1 N2 2_655 2_655 78.47(14) ? N1' Y1 N2 . 2_655 137.85(13) ? N1' Y1 N2 2_655 2_655 122.85(14) ? N1 Y1 N2 . . 68.13(13) ? N1 Y1 N2 2_655 . 138.63(13) ? N2' Y1 N2 . . 78.47(14) ? N2' Y1 N2 2_655 . 80.55(14) ? N1' Y1 N2 . . 122.85(14) ? N1' Y1 N2 2_655 . 137.85(13) y N2 Y1 N2 2_655 . 73.1(2) y C1 N1 Y1 . . 112.8(3) ? N1 C1 C2 . . 108.9(4) ? N2 C2 C1 . . 109.4(4) ? C2 N2 Y1 . . 114.9(3) ? C1' N1' Y1 . . 115.9(3) ? N1' C1' C2' . . 109.1(4) ? N2' C2' C1' . . 109.8(4) ? C2' N2' Y1 . . 114.1(3) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Y1 N1 . 2.488(4) y Y1 N1 2_655 2.488(4) n Y1 N2' . 2.513(4) y Y1 N2' 2_655 2.513(4) n Y1 N1' . 2.517(4) y Y1 N1' 2_655 2.517(4) n Y1 N2 2_655 2.520(4) n Y1 N2 . 2.520(4) y N1 C1 . 1.470(7) ? C1 C2 . 1.515(8) ? C2 N2 . 1.473(6) ? N1' C1' . 1.462(6) ? C1' C2' . 1.499(8) ? C2' N2' . 1.479(7) ?