#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2007090.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2007090 loop_ _publ_author_name 'Okabe, N.' 'Koizumi, M.' _publ_contact_author ; Nobuo Okabe Faculty of Pharmaceutical Sciences Kinki University Kowakae 3-4-1 Higashiosaka Osaka 577 Japan ; _publ_section_title ; Diaquabis(2-pyridinecarboxylato-N,O)manganese(II) ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 288 _journal_page_last 290 _journal_volume 54 _journal_year 1998 _chemical_formula_iupac '[Mn (C6 H4 N O2)2 (H2 O)2]' _chemical_formula_moiety ' [Mn(C~6~H~4~NO~2~)~2~(H~2~O)~2~]' _chemical_formula_sum 'C12 H12 Mn N2 O6' _chemical_formula_weight 335.17 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _atom_type_scat_source 'International Tables for X-ray Crystallography Vol.IV' _cell_angle_alpha 90 _cell_angle_beta 106.460(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 11.708(2) _cell_length_b 8.991(2) _cell_length_c 14.994(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296 _cell_measurement_theta_max 23.00 _cell_measurement_theta_min 21.05 _cell_volume 1513.7(5) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988) ; _computing_data_reduction 'TEXSAN TEXRAY (Molecular Structure Corporation, 1985)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976)' _computing_structure_refinement 'TEXSAN TEXRAY' _computing_structure_solution 'SHELX86 (Sheldrick, 1985), DIRDIF (Beurskens, 1984)' _diffrn_measurement_device 'Rigaku AFC5R' _diffrn_measurement_method \w-2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.023 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 3876 _diffrn_reflns_theta_max 27.5 _diffrn_standards_decay_% 0.50 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.862 _exptl_absorpt_correction_T_max 0.772 _exptl_absorpt_correction_T_min 0.703 _exptl_absorpt_correction_type '\y scans (North, Phillips & Mathews, 1968)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.471 _exptl_crystal_density_meas 'not determined' _exptl_crystal_description prism _exptl_crystal_size_max 0.40 _exptl_crystal_size_mid 0.30 _exptl_crystal_size_min 0.30 _refine_diff_density_max 0.44 _refine_diff_density_min -0.27 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.76 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 238 _refine_ls_number_reflns 2601 _refine_ls_R_factor_obs 0.036 _refine_ls_shift/esd_max 0.02 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme 'w = 4F~o~^2^/\s^2^(F~o~^2^)' _refine_ls_wR_factor_obs 0.046 _reflns_number_observed 2601 _reflns_number_total 3703 _reflns_observed_criterion I>3\s(I) _[local]_cod_data_source_file jz1229.cif _[local]_cod_data_source_block global _[local]_cod_cif_authors_sg_H-M P21/n _[local]_cod_chemical_formula_sum_orig 'C12 H12 N2 O6 Mn' _cod_original_cell_volume 1513.6(4) _cod_database_code 2007090 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,1/2+y,1/2-z -x,-y,-z 1/2+x,1/2-y,1/2+z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Mn(1) 0.0405(2) 0.0328(2) 0.0370(2) -0.0005(2) 0.00480(10) -0.0006(2) O(1) 0.0520(10) 0.0510(10) 0.0430(10) 0.0070(9) -0.0057(8) 0.0055(8) O(2) 0.0510(10) 0.0364(9) 0.0440(10) -0.0023(8) 0.0007(8) 0.0038(8) O(3) 0.082(2) 0.0580(10) 0.101(2) -0.0320(10) 0.0500(10) -0.0340(10) O(4) 0.0460(10) 0.0400(10) 0.0620(10) -0.0029(8) 0.0183(9) -0.0110(9) O(5) 0.0510(10) 0.0450(10) 0.0660(10) 0.0110(10) 0.0220(10) 0.0150(10) O(6) 0.0390(10) 0.0590(10) 0.0490(10) 0.0000(10) 0.0041(9) 0.0170(10) N(1) 0.0420(10) 0.0350(10) 0.0370(10) 0.0006(9) 0.0041(8) 0.0014(9) N(2) 0.0500(10) 0.0460(10) 0.0590(10) 0.0020(10) 0.0240(10) -0.0040(10) C(2) 0.0300(10) 0.0390(10) 0.0370(10) 0.0010(10) 0.0070(10) -0.0010(10) C(3) 0.049(2) 0.048(2) 0.0440(10) 0.0040(10) 0.0010(10) -0.0090(10) C(4) 0.053(2) 0.0450(10) 0.060(2) 0.0000(10) 0.0120(10) -0.0160(10) C(5) 0.059(2) 0.0340(10) 0.058(2) 0.0020(10) 0.0210(10) 0.0010(10) C(6) 0.061(2) 0.0380(10) 0.042(2) 0.0030(10) 0.0100(10) 0.0050(10) C(7) 0.0320(10) 0.0440(10) 0.0400(10) 0.0040(10) 0.0070(10) 0.0040(10) C(8) 0.0500(10) 0.0490(10) 0.0430(10) -0.0030(10) 0.0200(10) 0.0020(10) C(9) 0.062(2) 0.066(2) 0.097(3) -0.011(2) 0.041(2) 0.000(2) C(10) 0.069(2) 0.092(3) 0.173(5) 0.002(2) 0.075(3) 0.006(3) C(11) 0.088(3) 0.071(3) 0.186(5) 0.011(2) 0.088(3) -0.011(3) C(12) 0.082(2) 0.056(2) 0.127(3) -0.001(2) 0.061(2) -0.015(2) C(13) 0.052(2) 0.0470(10) 0.0410(10) -0.0100(10) 0.0150(10) -0.0060(10) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z Mn(1) 0.75355(3) 0.14112(4) 0.87133(2) O(1) 0.9609(2) 0.1416(2) 1.14830(10) O(2) 0.8482(2) 0.0727(2) 1.00940(10) O(3) 0.5269(2) -0.2301(2) 0.8090(2) O(4) 0.6806(2) -0.0771(2) 0.83140(10) O(5) 0.9081(2) 0.1109(2) 0.8215(2) O(6) 0.6808(2) 0.2553(2) 0.74180(10) N(1) 0.8076(2) 0.3552(2) 0.95290(10) N(2) 0.5646(2) 0.1409(2) 0.8859(2) C(2) 0.8722(2) 0.3313(3) 1.0406(2) C(3) 0.9168(2) 0.4469(3) 1.1012(2) C(4) 0.8943(3) 0.5914(3) 1.0697(2) C(5) 0.8292(3) 0.6166(3) 0.9805(2) C(6) 0.7871(2) 0.4961(3) 0.9239(2) C(7) 0.8958(2) 0.1687(3) 1.0684(2) C(8) 0.5071(2) 0.0118(3) 0.8639(2) C(9) 0.3917(3) -0.0073(4) 0.8664(3) C(10) 0.3348(4) 0.1098(5) 0.8940(4) C(11) 0.3916(4) 0.2422(5) 0.9152(4) C(12) 0.5060(4) 0.2531(4) 0.9104(3) C(13) 0.5760(2) -0.1098(3) 0.8325(2) H(1) 0.749(2) 0.512(3) 0.863(2) H(2) 0.814(3) 0.718(4) 0.956(2) H(3) 0.923(3) 0.666(3) 1.110(2) H(4) 0.962(2) 0.425(3) 1.165(2) H(5) 0.547(4) 0.333(4) 0.924(3) H(6) 0.360(4) 0.333(4) 0.940(3) H(7) 0.261(4) 0.085(5) 0.897(3) H(8) 0.356(3) -0.096(3) 0.848(2) H(9) 0.921(3) 0.164(4) 0.782(2) H(10) 0.959(3) 0.043(4) 0.839(2) H(11) 0.613(3) 0.271(4) 0.720(2) H(12) 0.730(3) 0.304(4) 0.721(2) loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O(2) Mn(1) O(4) 93.59(7) yes O(2) Mn(1) O(5) 92.50(8) yes O(2) Mn(1) O(6) 167.11(7) yes O(2) Mn(1) N(1) 74.61(7) yes O(2) Mn(1) N(2) 99.04(8) yes O(4) Mn(1) O(5) 95.40(7) yes O(4) Mn(1) O(6) 99.16(8) yes O(4) Mn(1) N(1) 161.53(7) yes O(4) Mn(1) N(2) 73.00(7) yes O(5) Mn(1) O(6) 84.48(9) yes O(5) Mn(1) N(1) 99.20(8) yes O(5) Mn(1) N(2) 164.02(8) yes O(6) Mn(1) N(1) 93.46(8) yes O(6) Mn(1) N(2) 86.55(8) yes N(1) Mn(1) N(2) 94.51(8) yes Mn(1) O(2) C(7) 119.4(2) yes Mn(1) O(4) C(13) 121.1(2) yes Mn(1) N(1) C(2) 112.80(10) yes Mn(1) N(1) C(6) 129.1(2) yes Mn(1) N(2) C(8) 114.3(2) yes Mn(1) N(2) C(12) 128.0(2) yes C(2) N(1) C(6) 118.1(2) no C(8) N(2) C(12) 117.7(3) no N(1) C(2) C(3) 122.0(2) no N(1) C(2) C(7) 115.6(2) no C(3) C(2) C(7) 122.5(2) no C(2) C(3) C(4) 118.8(3) no C(3) C(4) C(5) 119.5(3) no C(4) C(5) C(6) 118.6(3) no N(1) C(6) C(5) 123.0(2) no O(1) C(7) O(2) 125.0(2) no O(1) C(7) C(2) 117.6(2) no O(2) C(7) C(2) 117.4(2) no N(2) C(8) C(9) 122.2(3) no N(2) C(8) C(13) 115.5(2) no C(9) C(8) C(13) 122.3(3) no C(8) C(9) C(10) 118.6(3) no C(9) C(10) C(11) 119.7(3) no C(10) C(11) C(12) 118.3(4) no N(2) C(12) C(11) 123.5(4) no O(3) C(13) O(4) 125.2(3) no O(3) C(13) C(8) 118.7(2) no O(4) C(13) C(8) 116.1(2) no Mn(1) O(5) H(9) 122(2) no Mn(1) O(5) H(10) 125(2) no H(9) O(5) H(10) 113(3) no Mn(1) O(6) H(11) 124(2) no Mn(1) O(6) H(12) 117(2) no H(11) O(6) H(12) 117(3) no C(2) C(3) H(4) 120(2) no C(4) C(3) H(4) 122(2) no C(3) C(4) H(3) 118(2) no C(5) C(4) H(3) 123(2) no C(4) C(5) H(2) 121(2) no C(6) C(5) H(2) 120(2) no N(1) C(6) H(1) 118(2) no C(5) C(6) H(1) 119(2) no C(8) C(9) H(8) 118(2) no C(10) C(9) H(8) 123(2) no C(9) C(10) H(7) 112(3) no C(11) C(10) H(7) 128(3) no C(10) C(11) H(6) 126(2) no C(12) C(11) H(6) 116(2) no C(11) C(12) H(5) 123(3) no N(2) C(12) H(5) 114(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Mn(1) O(2) 2.142(2) yes Mn(1) O(4) 2.156(2) yes Mn(1) O(5) 2.162(2) yes Mn(1) O(6) 2.148(2) yes Mn(1) N(1) 2.272(2) yes Mn(1) N(2) 2.284(2) yes O(1) C(7) 1.249(3) no O(2) C(7) 1.249(3) no O(3) C(13) 1.228(3) no O(4) C(13) 1.265(3) no N(1) C(2) 1.337(3) no N(1) C(6) 1.339(3) no N(2) C(8) 1.336(3) no N(2) C(12) 1.328(4) no C(2) C(3) 1.381(3) no C(2) C(7) 1.524(3) no C(3) C(4) 1.382(4) no C(4) C(5) 1.358(4) no C(5) C(6) 1.378(4) no C(8) C(9) 1.374(4) no C(8) C(13) 1.510(4) no C(9) C(10) 1.371(5) no C(10) C(11) 1.357(6) no C(11) C(12) 1.365(5) no O(5) H(9) 0.81(3) no O(5) H(10) 0.84(3) no O(6) H(11) 0.79(3) no O(6) H(12) 0.85(4) no C(3) H(4) 0.97(3) no C(4) H(3) 0.90(3) no C(5) H(2) 0.98(3) no C(6) H(1) 0.90(2) no C(9) H(8) 0.91(3) no C(10) H(7) 0.91(5) no C(11) H(6) 1.01(4) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O(5) H(9) O(3) 2_656 0.81(3) 1.90(3) 2.701(3) 170.8(3) y O(5) H(10) O(1) 3_757 0.84(3) 1.89(4) 2.705(3) 163.1(3) y O(6) H(11) O(1) 4_454 0.79(3) 1.96(3) 2.721(3) 163.4(3) y O(6) H(12) O(4) 2_656 0.85(4) 1.82(4) 2.669(3) 173.3(3) y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag Mn(1) O(2) C(7) O(1) -173.9(2) no Mn(1) O(2) C(7) C(2) 6.3(3) no Mn(1) O(4) C(13) O(3) 178.3(2) no Mn(1) O(4) C(13) C(8) -0.5(3) no Mn(1) N(1) C(2) C(3) 178.2(2) no Mn(1) N(1) C(2) C(7) -0.4(2) no Mn(1) N(1) C(6) C(5) -177.5(2) no Mn(1) N(2) C(8) C(9) -178.4(2) no Mn(1) N(2) C(8) C(13) -0.6(3) no Mn(1) N(2) C(12) C(11) 178.6(4) no O(1) C(7) C(2) N(1) 176.5(2) no O(1) C(7) C(2) C(3) -2.1(4) no O(2) Mn(1) O(4) C(13) 98.5(2) no O(2) Mn(1) N(1) C(2) 2.5(2) no O(2) Mn(1) N(1) C(6) 179.8(2) no O(2) Mn(1) N(2) C(8) -90.7(2) no O(2) Mn(1) N(2) C(12) 91.5(3) no O(2) C(7) C(2) N(1) -3.7(3) no O(2) C(7) C(2) C(3) 177.7(2) no O(3) C(13) C(8) N(2) -178.2(3) no O(3) C(13) C(8) C(9) -0.4(4) no O(4) Mn(1) O(2) C(7) -170.4(2) no O(4) Mn(1) N(1) C(2) 54.2(3) no O(4) Mn(1) N(1) C(6) -128.5(3) no O(4) Mn(1) N(2) C(8) 0.3(2) no O(4) Mn(1) N(2) C(12) -177.5(3) no O(4) C(13) C(8) N(2) 0.7(4) no O(4) C(13) C(8) C(9) 178.5(3) no O(5) Mn(1) O(2) C(7) 94.0(2) no O(5) Mn(1) O(4) C(13) -168.7(2) no O(5) Mn(1) N(1) C(2) -87.6(2) no O(5) Mn(1) N(1) C(6) 89.7(2) no O(5) Mn(1) N(2) C(8) 45.1(4) no O(5) Mn(1) N(2) C(12) -132.8(4) no O(6) Mn(1) O(2) C(7) 17.9(4) no O(6) Mn(1) O(4) C(13) -83.4(2) no O(6) Mn(1) N(1) C(2) -172.6(2) no O(6) Mn(1) N(1) C(6) 4.7(2) no O(6) Mn(1) N(2) C(8) 101.0(2) no O(6) Mn(1) N(2) C(12) -76.8(3) no N(1) Mn(1) O(2) C(7) -4.9(2) no N(1) Mn(1) O(4) C(13) 49.1(3) no N(1) Mn(1) N(2) C(8) -165.8(2) no N(1) Mn(1) N(2) C(12) 16.4(3) no N(1) C(2) C(3) C(4) -0.4(4) no N(1) C(6) C(5) C(4) 0.0(5) no N(2) Mn(1) O(2) C(7) -97.1(2) no N(2) Mn(1) O(4) C(13) 0.1(2) no N(2) Mn(1) N(1) C(2) 100.6(2) no N(2) Mn(1) N(1) C(6) -82.1(2) no N(2) C(8) C(9) C(10) -1.2(5) no N(2) C(12) C(11) C(10) 0.2(8) no C(2) N(1) C(6) C(5) -0.3(4) no C(2) C(3) C(4) C(5) 0.1(4) no C(3) C(2) N(1) C(6) 0.5(4) no C(3) C(4) C(5) C(6) 0.1(4) no C(4) C(3) C(2) C(7) 178.0(2) no C(6) N(1) C(2) C(7) -178.0(2) no C(8) N(2) C(12) C(11) 0.8(6) no C(8) C(9) C(10) C(11) 2.2(7) no C(9) C(8) N(2) C(12) -0.3(4) no C(9) C(10) C(11) C(12) -1.7(8) no C(10) C(9) C(8) C(13) -178.7(4) no C(12) N(2) C(8) C(13) 177.4(3) no