#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2007112.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2007112 loop_ _publ_author_name 'Wang, Y.' 'Stoeckli-Evans, H.' _publ_section_title ; Diaquabis(5-methoxycarbonyl-3,6-dimethylpyrazine-2-carboxylato-N^1^,O)copper(II) ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 306 _journal_page_last 308 _journal_volume 54 _journal_year 1998 _chemical_formula_iupac '[Cu (C9 H9 N2 O4)2 (H2 O)2]' _chemical_formula_moiety 'C18 H22 Cu N4 O10' _chemical_formula_sum 'C18 H22 Cu N4 O10' _chemical_formula_weight 517.94 _chemical_name_systematic ; ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90 _cell_angle_beta 103.640(10) _cell_angle_gamma 90 _cell_formula_units_Z 2 _cell_length_a 8.9070(10) _cell_length_b 10.042(2) _cell_length_c 11.927(2) _cell_measurement_reflns_used 19 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 19.5 _cell_measurement_theta_min 14.0 _cell_volume 1036.7(3) _computing_cell_refinement DIF4 _computing_data_collection 'DIF4 (Stoe & Cie, 1995)' _computing_data_reduction 'REDU4 (Stoe & Cie, 1996)' _computing_molecular_graphics 'PLATON/PLUTON (Spek, 1990)' _computing_publication_material SHELXL93 _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 295(2) _diffrn_measurement_device 'Stoe AED2 four-circle' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.0636 _diffrn_reflns_limit_h_max 9 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 1356 _diffrn_reflns_theta_max 22.51 _diffrn_reflns_theta_min 2.35 _diffrn_standards_decay_% 1.5 _diffrn_standards_interval_time 60 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 1.097 _exptl_absorpt_correction_type none _exptl_crystal_colour 'pale green/blue' _exptl_crystal_density_diffrn 1.659 _exptl_crystal_density_method none _exptl_crystal_description lozenge _exptl_crystal_F_000 534 _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.11 _exptl_crystal_size_min 0.11 _refine_diff_density_max 0.274 _refine_diff_density_min -0.304 _refine_ls_extinction_coef 0.0010(11) _refine_ls_extinction_method 'SHELXL93 (Sheldrick, 1993)' _refine_ls_goodness_of_fit_all 1.144 _refine_ls_goodness_of_fit_obs 1.131 _refine_ls_hydrogen_treatment 'H atoms: see below' _refine_ls_matrix_type full _refine_ls_number_parameters 163 _refine_ls_number_reflns 1352 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.161 _refine_ls_restrained_S_obs 1.131 _refine_ls_R_factor_all 0.101 _refine_ls_R_factor_obs 0.045 _refine_ls_shift/esd_max -0.001 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0382P)^2^+1.6057P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.116 _refine_ls_wR_factor_obs 0.089 _reflns_number_observed 893 _reflns_number_total 1356 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file mu1367.cif _[local]_cod_data_source_block cul1mee _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_database_code 2007112 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0266(5) 0.0436(6) 0.0427(6) 0.0048(6) -0.0025(4) -0.0166(6) OW1 0.056(4) 0.079(4) 0.057(4) 0.004(4) 0.014(3) 0.014(3) N1 0.026(2) 0.023(2) 0.028(2) -0.001(2) 0.003(2) 0.001(2) N2 0.028(2) 0.024(2) 0.032(2) 0.000(2) 0.005(2) 0.000(2) O1 0.047(3) 0.075(4) 0.076(3) 0.010(3) -0.011(2) -0.046(3) O2 0.035(2) 0.070(3) 0.070(3) 0.017(2) -0.018(2) -0.032(3) O3 0.028(2) 0.058(3) 0.053(3) 0.011(2) -0.007(2) -0.024(2) O4 0.039(2) 0.071(3) 0.056(3) 0.009(2) 0.000(2) -0.036(3) C1 0.026(2) 0.027(3) 0.027(2) 0.002(3) 0.002(2) 0.001(3) C2 0.028(3) 0.027(3) 0.025(3) 0.003(2) 0.001(2) 0.005(2) C3 0.033(3) 0.021(3) 0.026(3) 0.007(2) 0.010(2) 0.002(2) C4 0.027(3) 0.022(3) 0.031(3) -0.001(3) 0.004(2) -0.002(2) C5 0.035(3) 0.046(3) 0.032(3) 0.007(3) 0.003(2) -0.008(3) C6 0.026(3) 0.035(3) 0.035(3) -0.002(3) 0.004(2) 0.003(4) C7 0.043(4) 0.104(7) 0.087(5) 0.016(4) -0.034(3) -0.045(5) C8 0.036(3) 0.042(4) 0.036(3) 0.007(3) 0.005(3) -0.003(3) C9 0.036(3) 0.034(3) 0.033(3) 0.001(3) 0.008(3) -0.007(3) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Cu1 0.0000 0.0000 0.0000 0.0394(4) Uani d S 1 Cu OW1 -0.0765(9) -0.1726(6) 0.1232(5) 0.064(2) Uani d . 1 O H11 -0.151(10) -0.163(10) 0.126(8) 0.09(4) Uiso d . 1 H H12 -0.015(11) -0.188(10) 0.177(8) 0.10(4) Uiso d . 1 H N1 -0.2350(5) 0.0542(4) -0.0707(3) 0.0265(10) Uani d . 1 N N2 -0.5414(5) 0.1272(4) -0.1043(4) 0.0281(10) Uani d . 1 N O1 -0.6057(5) -0.1018(5) -0.3320(4) 0.070(2) Uani d . 1 O O2 -0.7439(5) 0.0657(5) -0.2918(4) 0.0635(14) Uani d . 1 O O3 -0.0210(4) 0.1362(4) 0.1052(3) 0.0488(12) Uani d . 1 O O4 -0.1775(5) 0.2692(5) 0.1700(4) 0.0575(13) Uani d . 1 O C1 -0.3379(5) 0.0105(6) -0.1650(4) 0.0273(11) Uani d . 1 C C2 -0.4934(6) 0.0469(5) -0.1774(4) 0.0274(13) Uani d . 1 C C3 -0.4371(6) 0.1786(5) -0.0154(4) 0.0262(12) Uani d . 1 C C4 -0.2818(6) 0.1383(5) 0.0024(4) 0.0273(12) Uani d . 1 C C5 -0.2796(6) -0.0698(6) -0.2510(4) 0.0384(14) Uani d . 1 C H5A -0.335(3) -0.046(3) -0.3275(5) 0.058 Uiso calc R 1 H H5B -0.295(4) -0.1628(6) -0.2382(19) 0.058 Uiso calc R 1 H H5C -0.1715(11) -0.052(3) -0.243(2) 0.058 Uiso calc R 1 H C6 -0.6177(5) -0.0062(7) -0.2760(4) 0.0325(12) Uani d . 1 C C7 -0.8715(7) 0.0229(9) -0.3851(6) 0.086(3) Uani d . 1 C H7A -0.958(3) 0.082(4) -0.390(3) 0.129 Uiso calc R 1 H H7B -0.901(5) -0.066(2) -0.370(3) 0.129 Uiso calc R 1 H H7C -0.840(2) 0.025(6) -0.4567(9) 0.129 Uiso calc R 1 H C8 -0.4973(6) 0.2761(6) 0.0578(5) 0.0385(15) Uani d . 1 C H8A -0.461(3) 0.3638(8) 0.046(2) 0.058 Uiso calc R 1 H H8B -0.461(3) 0.252(2) 0.1376(5) 0.058 Uiso calc R 1 H H8C -0.6082(6) 0.275(3) 0.037(2) 0.058 Uiso calc R 1 H C9 -0.1525(7) 0.1856(6) 0.1014(5) 0.0344(14) Uani d . 1 C loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cu Cu 0.2630 1.2660 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O3 Cu1 O3 3 . 180.0 n O3 Cu1 N1 3 . 99.4(2) n O3 Cu1 N1 . . 80.6(2) yes O3 Cu1 N1 3 3 80.6(2) no O3 Cu1 N1 . 3 99.4(2) no N1 Cu1 N1 . 3 180.0 n O3 Cu1 OW1 3 3 91.6(2) no O3 Cu1 OW1 . 3 88.4(2) n N1 Cu1 OW1 . 3 88.2(2) n N1 Cu1 OW1 3 3 91.8(2) no O3 Cu1 OW1 3 . 88.4(2) no O3 Cu1 OW1 . . 91.6(2) yes N1 Cu1 OW1 . . 91.8(2) yes N1 Cu1 OW1 3 . 88.2(2) no OW1 Cu1 OW1 3 . 180.0 n C1 N1 C4 . . 119.4(4) n C1 N1 Cu1 . . 131.2(4) n C4 N1 Cu1 . . 109.1(3) n C2 N2 C3 . . 118.9(4) n C6 O2 C7 . . 115.8(5) n C9 O3 Cu1 . . 119.7(3) n N1 C1 C2 . . 117.6(5) n N1 C1 C5 . . 118.1(4) n C2 C1 C5 . . 124.3(4) n N2 C2 C1 . . 123.4(5) n N2 C2 C6 . . 115.8(5) n C1 C2 C6 . . 120.9(5) n N2 C3 C4 . . 118.8(4) n N2 C3 C8 . . 116.0(4) n C4 C3 C8 . . 125.2(5) n N1 C4 C3 . . 121.7(4) n N1 C4 C9 . . 113.9(4) n C3 C4 C9 . . 124.4(5) n O1 C6 O2 . . 123.5(5) n O1 C6 C2 . . 125.2(5) n O2 C6 C2 . . 111.3(5) n O4 C9 O3 . . 123.8(5) n O4 C9 C4 . . 120.6(5) n O3 C9 C4 . . 115.6(5) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O3 3 1.895(4) no Cu1 O3 . 1.895(4) yes Cu1 N1 . 2.135(4) yes Cu1 N1 3 2.135(4) no Cu1 OW1 3 2.470(6) no Cu1 OW1 . 2.470(6) yes N1 C1 . 1.346(6) n N1 C4 . 1.349(6) n N2 C2 . 1.330(6) n N2 C3 . 1.338(6) n O1 C6 . 1.188(7) n O2 C6 . 1.312(7) n O2 C7 . 1.456(7) n O3 C9 . 1.263(6) n O4 C9 . 1.229(6) n C1 C2 . 1.406(7) n C1 C5 . 1.491(7) n C2 C6 . 1.510(7) n C3 C4 . 1.408(7) n C3 C8 . 1.493(7) n C4 C9 . 1.518(7) n loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion O3 Cu1 N1 C1 3 -2.8(5) O3 Cu1 N1 C1 . 177.2(5) N1 Cu1 N1 C1 3 -27.(13) OW1 Cu1 N1 C1 3 88.6(5) OW1 Cu1 N1 C1 . -91.4(5) O3 Cu1 N1 C4 3 171.0(3) O3 Cu1 N1 C4 . -9.0(3) N1 Cu1 N1 C4 3 147.(13) OW1 Cu1 N1 C4 3 -97.7(3) OW1 Cu1 N1 C4 . 82.3(3) O3 Cu1 O3 C9 3 -141.(2) N1 Cu1 O3 C9 . 8.2(5) N1 Cu1 O3 C9 3 -171.8(5) OW1 Cu1 O3 C9 3 96.6(5) OW1 Cu1 O3 C9 . -83.4(5) C4 N1 C1 C2 . -5.1(7) Cu1 N1 C1 C2 . 168.1(4) C4 N1 C1 C5 . 173.2(5) Cu1 N1 C1 C5 . -13.6(7) C3 N2 C2 C1 . 1.4(7) C3 N2 C2 C6 . -179.6(5) N1 C1 C2 N2 . 3.6(8) C5 C1 C2 N2 . -174.6(5) N1 C1 C2 C6 . -175.4(5) C5 C1 C2 C6 . 6.4(8) C2 N2 C3 C4 . -4.6(7) C2 N2 C3 C8 . 175.3(5) C1 N1 C4 C3 . 2.0(7) Cu1 N1 C4 C3 . -172.6(4) C1 N1 C4 C9 . -176.8(5) Cu1 N1 C4 C9 . 8.6(5) N2 C3 C4 N1 . 3.0(8) C8 C3 C4 N1 . -176.9(5) N2 C3 C4 C9 . -178.3(5) C8 C3 C4 C9 . 1.8(8) C7 O2 C6 O1 . -0.9(10) C7 O2 C6 C2 . -180.0(6) N2 C2 C6 O1 . -160.3(6) C1 C2 C6 O1 . 18.8(9) N2 C2 C6 O2 . 18.8(7) C1 C2 C6 O2 . -162.1(5) Cu1 O3 C9 O4 . 176.2(5) Cu1 O3 C9 C4 . -5.7(7) N1 C4 C9 O4 . 175.3(5) C3 C4 C9 O4 . -3.5(9) N1 C4 C9 O3 . -3.0(7) C3 C4 C9 O3 . 178.2(5)