#------------------------------------------------------------------------------ #$Date: 2012-02-03 17:16:24 +0000 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/71/2007131.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2007131 loop_ _publ_author_name 'Vega, Daniel' 'Baggio, Ricardo' 'Piro, Oscar' _publ_section_title ; Monosodium 3-(Dimethylammonio)-1-hydroxy-1,1-propanediyldiphosphonate Monohydrate (Monosodium Olpadronate Monohydrate) ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 324 _journal_page_last 327 _journal_volume 54 _journal_year 1998 _chemical_formula_moiety ; Na 1+ , C5 H14 N1 O7 P2 1- , H2 O ; _chemical_formula_sum 'C5 H16 N Na O8 P2' _chemical_formula_weight 303.12 _chemical_name_common OLPADRONATE _chemical_name_systematic ;Monosodium 3(N,N-dimethyl)-1-hydroxy-1,1'-bisphosphonate, hydrate (Olpadronate) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _audit_creation_method SHELXL _cell_angle_alpha 107.940(10) _cell_angle_beta 96.290(10) _cell_angle_gamma 93.880(10) _cell_formula_units_Z 2 _cell_length_a 5.9290(10) _cell_length_b 9.1310(10) _cell_length_c 11.7160(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 15 _cell_measurement_theta_min 7.5 _cell_volume 596.35(14) _computing_cell_refinement CAD-4/PC _computing_data_collection 'CAD-4/PC (Enraf Nonius,1993)' _computing_data_reduction 'MolEN (Fair, 1990)' _computing_molecular_graphics 'XP in SHELXTL/PC' _computing_publication_material ; CIFTAB (Sheldrick, 1993), PARST (Nardelli, 1983) and CSD (Allen, Kennard & Taylor, 1983) ; _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'XS in SHELXTL/PC (Sheldrick,1991)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device CAD-4 _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'rotating anode' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0726 _diffrn_reflns_av_sigmaI/netI 0.0721 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -1 _diffrn_reflns_number 3281 _diffrn_reflns_theta_max 27.97 _diffrn_reflns_theta_min 1.84 _diffrn_standards_decay_% <1 _diffrn_standards_interval_count 98 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 0.43 _exptl_absorpt_correction_T_max 0.98 _exptl_absorpt_correction_T_min 0.89 _exptl_absorpt_correction_type 'Numerical integration' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.688 _exptl_crystal_density_meas not_measured _exptl_crystal_description Prism _exptl_crystal_F_000 316 _exptl_crystal_size_max 0.32 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.04 _refine_diff_density_max 0.52 _refine_diff_density_min -0.53 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.10 _refine_ls_goodness_of_fit_obs 1.05 _refine_ls_hydrogen_treatment 'H atoms riding' _refine_ls_matrix_type full _refine_ls_number_parameters 167 _refine_ls_number_reflns 2865 _refine_ls_number_restraints 5 _refine_ls_restrained_S_all 1.10 _refine_ls_restrained_S_obs 1.05 _refine_ls_R_factor_all 0.0903 _refine_ls_R_factor_obs .0419 _refine_ls_shift/esd_max <0.001 _refine_ls_shift/esd_mean <0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0418P)^2^+0.7443P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_all 0.1253 _refine_ls_wR_factor_obs .0956 _reflns_number_observed 1876 _reflns_number_total 2865 _reflns_observed_criterion >2sigma(I) _[local]_cod_data_source_file sx1043.cif _[local]_cod_data_source_block olpadronate _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_bond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (20 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 596.30(10) _cod_database_code 2007131 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Na .0164(6) .0252(7) .0235(7) .0048(5) .0010(5) .0057(5) P1 .0127(4) .0141(4) .0188(4) .0022(3) .0014(3) .0064(3) P2 .0149(4) .0172(4) .0163(4) .0022(3) .0004(3) .0041(3) O11 .0277(13) .0223(12) .0273(13) .0063(10) .0045(10) .0149(10) O12 .0159(11) .0190(11) .0233(12) .0003(9) .0003(9) .0033(10) O13 .0178(11) .0202(11) .0221(12) .0058(9) -.0013(9) .0042(9) O21 .0260(13) .0253(12) .0191(12) .0008(10) .0045(10) .0005(10) O22 .0221(12) .0193(11) .0224(12) -.0012(9) .0013(9) .0062(10) O23 .0175(12) .0307(13) .0239(13) .0090(10) .0006(9) .0092(10) O1 .0207(12) .0229(12) .0359(14) .0107(10) .0090(10) .0132(11) C1 .0141(14) .0189(15) .023(2) .0039(12) .0039(12) .0071(13) C2 .024(2) .021(2) .027(2) -.0026(13) .0053(14) .0062(14) C3 .038(3) .025(2) .021(2) -.008(2) .000(2) .007(2) N .029(2) .0202(14) .0201(15) -.0045(12) .0023(12) .0039(11) C4 .101(5) .050(3) .063(4) .040(3) .029(3) .030(3) C5 .055(4) .106(5) .055(3) -.009(3) -.014(3) .038(3) O1W .0252(14) .053(2) .0280(15) .0030(13) .0003(11) .0023(13) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol Na -.3107(2) .1403(2) .59930(12) .0222(3) Uani d . 1 . Na P1 .16754(14) .23637(9) .47851(8) .0149(2) Uani d . 1 . P P2 .23151(14) .25700(9) .74510(7) .0165(2) Uani d . 1 . P O11 .1681(4) .3362(3) .3972(2) .0239(5) Uani d . 1 . O O12 -.0713(4) .1381(3) .4529(2) .0204(5) Uani d D 1 . O H12 -.0557(4) .0577(3) .3984(2) .046(14) Uiso d RD 1 . H O13 .3570(4) .1367(3) .4716(2) .0208(5) Uani d . 1 . O O21 .1885(4) .3705(3) .8719(2) .0250(5) Uani d D 1 . O H21 .0453(4) .3553(3) .9011(2) .063(16) Uiso d RD 1 . H O22 .0548(4) .1197(3) .7096(2) .0216(5) Uani d . 1 . O O23 .4774(4) .2310(3) .7549(2) .0238(5) Uani d . 1 . O O1 -.0475(4) .4137(3) .6547(2) .0248(5) Uani d D 1 . O H1 -.0701(4) .5031(3) .6385(2) .043(13) Uiso d RD 1 . H C1 .1748(5) .3657(4) .6367(3) .0182(6) Uani d . 1 . C C2 .3578(6) .5006(4) .6540(3) .0244(7) Uani d . 1 . C H2A .4900(6) .4588(4) .6191(3) .046(13) Uiso d R 1 . H H2B .2984(6) .5652(4) .6083(3) .042(13) Uiso d R 1 . H C3 .4394(9) .6018(5) .7845(4) .029(2) Uani d P .82(2) . C C3A .344(4) .646(3) .751(2) .022(6) Uiso d P .18(2) . C H3B .3068(9) .6338(5) .8236(4) .035 Uiso d R 1 . H H3A .5223(9) .5441(5) .8291(4) .035 Uiso d R 1 . H N .5845(5) .7435(3) .7861(3) .0242(6) Uani d . 1 . N H1N .6537(5) .7181(3) .7180(3) .025(10) Uiso d R 1 . H C4 .4609(12) .8762(6) .7870(5) .066(2) Uani d . 1 . C H4A .3445(12) .8479(6) .7180(5) .079 Uiso d R 1 . H H4B .5651(12) .9595(6) .7837(5) .079 Uiso d R 1 . H H4C .3919(12) .9087(6) .8599(5) .079 Uiso d R 1 . H C5 .7652(10) .7835(8) .8914(5) .072(2) Uani d . 1 . C H5A .8444(10) .6946(8) .8892(5) .086 Uiso d R 1 . H H5B .6976(10) .8156(8) .9648(5) .086 Uiso d R 1 . H H5C .8709(10) .8664(8) .8887(5) .086 Uiso d R 1 . H O1W .7962(5) .3294(4) .9464(3) .0380(7) Uani d D 1 . O H1WA .7522(5) .4145(4) .9963(3) .049(15) Uiso d RD 1 . H H1WB .6887(5) .3052(4) .8772(3) .068(18) Uiso d RD 1 . H loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Na O23 1_455 2.303(3) y Na O13 1_455 2.331(3) y Na O12 . 2.340(3) y Na O13 2_556 2.392(3) y Na O22 . 2.447(3) y Na O1 . 2.709(3) y P1 O13 . 1.486(2) y P1 O11 . 1.508(2) y P1 O12 . 1.571(2) y P1 C1 . 1.860(3) y P2 O23 . 1.490(2) y P2 O22 . 1.499(2) y P2 O21 . 1.586(2) y P2 C1 . 1.854(3) y O1 C1 . 1.434(4) y C1 C2 . 1.534(4) y C2 C3 . 1.527(5) y C3 N . 1.499(5) y N C4 . 1.455(5) y N C5 . 1.478(6) y loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Na Na 0.0362 0.0249 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O23 Na O13 1_455 1_455 85.56(9) n O23 Na O12 1_455 . 160.56(11) n O13 Na O12 1_455 . 94.14(10) n O23 Na O13 1_455 2_556 110.09(10) n O13 Na O13 1_455 2_556 88.65(9) n O12 Na O13 . 2_556 89.32(9) n O23 Na O22 1_455 . 101.65(10) n O13 Na O22 1_455 . 172.32(10) n O12 Na O22 . . 79.96(9) n O13 Na O22 2_556 . 86.39(9) n O23 Na O1 1_455 . 93.45(9) n O13 Na O1 1_455 . 110.75(9) n O12 Na O1 . . 68.44(8) n O13 Na O1 2_556 . 150.86(9) n O22 Na O1 . . 71.79(8) n O13 P1 O11 . . 114.96(14) y O13 P1 O12 . . 111.33(13) y O11 P1 O12 . . 109.11(14) y O13 P1 C1 . . 109.92(14) y O11 P1 C1 . . 107.91(14) y O12 P1 C1 . . 102.87(13) y O23 P2 O22 . . 118.82(14) y O23 P2 O21 . . 107.60(14) y O22 P2 O21 . . 107.95(14) y O23 P2 C1 . . 108.93(14) y O22 P2 C1 . . 107.71(14) y O21 P2 C1 . . 104.99(14) y P1 O13 Na . 1_655 134.63(14) n P1 O13 Na . 2_556 125.01(14) n P2 O22 Na . . 117.25(13) n P2 O23 Na . 1_655 127.54(14) n C1 O1 Na . . 102.5(2) n O1 C1 C2 . . 113.4(3) y O1 C1 P2 . . 104.0(2) y C2 C1 P2 . . 113.5(2) y O1 C1 P1 . . 109.6(2) y C2 C1 P1 . . 106.0(2) y P2 C1 P1 . . 110.4(2) y C3 C2 C1 . . 116.2(3) y N C3 C2 . . 110.1(3) y C4 N C5 . . 110.7(4) y C4 N C3 . . 115.0(4) y C5 N C3 . . 108.2(4) y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag O23 Na P2 O23 1_455 . 150.1(3) n O13 Na P2 O23 1_455 . -102.6(3) n O12 Na P2 O23 . . -49.0(2) n O13 Na P2 O23 2_556 . 34.4(2) n O22 Na P2 O23 . . 57.5(2) n O1 Na P2 O23 . . -125.5(2) n Na Na P2 O23 2_456 . 14.6(3) n P2 Na P2 O23 1_455 . 157.5(2) n O23 Na P2 O22 1_455 . 92.6(2) n O13 Na P2 O22 1_455 . -160.0(3) n O12 Na P2 O22 . . -106.5(2) n O13 Na P2 O22 2_556 . -23.1(2) n O22 Na P2 O22 . . 0.0 n O1 Na P2 O22 . . 177.0(2) n Na Na P2 O22 2_456 . -42.9(2) n P2 Na P2 O22 1_455 . 100.1(2) n O23 Na P2 O21 1_455 . -11.32(12) n O13 Na P2 O21 1_455 . 96.0(2) n O12 Na P2 O21 . . 149.61(12) n O13 Na P2 O21 2_556 . -127.01(12) n O22 Na P2 O21 . . -103.9(2) n O1 Na P2 O21 . . 73.07(12) n Na Na P2 O21 2_456 . -146.8(2) n P2 Na P2 O21 1_455 . -3.84(12) n O23 Na P2 C1 1_455 . -113.39(13) n O13 Na P2 C1 1_455 . -6.0(2) n O12 Na P2 C1 . . 47.53(12) n O13 Na P2 C1 2_556 . 130.92(13) n O22 Na P2 C1 . . 154.0(2) n O1 Na P2 C1 . . -29.00(12) n Na Na P2 C1 2_456 . 111.1(2) n P2 Na P2 C1 1_455 . -105.91(11) n O23 Na P2 Na 1_455 1_655 172.52(7) n O13 Na P2 Na 1_455 1_655 -80.1(2) n O12 Na P2 Na . 1_655 -26.55(9) n O13 Na P2 Na 2_556 1_655 56.83(10) n O22 Na P2 Na . 1_655 79.9(2) n O1 Na P2 Na . 1_655 -103.08(8) n Na Na P2 Na 2_456 1_655 37.1(2) n P2 Na P2 Na 1_455 1_655 180.0 n O13 P1 O12 Na . . 108.9(2) n O11 P1 O12 Na . . -123.2(2) n C1 P1 O12 Na . . -8.8(2) n O23 Na O12 P1 1_455 . 51.0(4) n O13 Na O12 P1 1_455 . 139.3(2) n O13 Na O12 P1 2_556 . -132.1(2) n O22 Na O12 P1 . . -45.6(2) n O1 Na O12 P1 . . 28.65(14) n Na Na O12 P1 2_456 . -175.56(15) n P2 Na O12 P1 . . -23.20(14) n P2 Na O12 P1 1_455 . 99.8(2) n O12 P1 O13 Na . 1_655 -128.0(2) n C1 P1 O13 Na . 1_655 -14.7(2) n O11 P1 O13 Na . 2_556 -115.7(2) n O12 P1 O13 Na . 2_556 9.0(2) n C1 P1 O13 Na . 2_556 122.4(2) n O23 P2 O22 Na . . -150.27(14) n O21 P2 O22 Na . . 87.0(2) n C1 P2 O22 Na . . -25.9(2) n Na P2 O22 Na . . 0.0 n Na P2 O22 Na 1_655 . -117.46(11) n O23 Na O22 P2 1_455 . -92.2(2) n O13 Na O22 P2 1_455 . 108.2(7) n O12 Na O22 P2 . . 68.08(15) n O13 Na O22 P2 2_556 . 158.03(15) n O1 Na O22 P2 . . -2.37(13) n Na Na O22 P2 2_456 . 152.77(12) n P2 Na O22 P2 . . 0.0 n P2 Na O22 P2 1_455 . -94.06(14) n O22 P2 O23 Na . 1_655 76.0(2) n O21 P2 O23 Na . 1_655 -161.1(2) n C1 P2 O23 Na . 1_655 -47.8(2) n Na P2 O23 Na . 1_655 38.1(3) n Na P2 O23 Na 1_655 1_655 0.0 n O23 Na O1 C1 1_455 . 139.9(2) n O13 Na O1 C1 1_455 . -133.5(2) n O12 Na O1 C1 . . -47.3(2) n O13 Na O1 C1 2_556 . -4.6(3) n O22 Na O1 C1 . . 38.8(2) n Na Na O1 C1 2_456 . -101.5(2) n P2 Na O1 C1 . . 37.6(2) n P2 Na O1 C1 1_455 . 158.9(2) n Na O1 C1 C2 . . 176.0(2) n Na O1 C1 P2 . . -60.2(2) n Na O1 C1 P1 . . 57.8(2) n O23 P2 C1 O1 . . -167.5(2) n O22 P2 C1 O1 . . 62.3(2) n O21 P2 C1 O1 . . -52.5(2) n Na P2 C1 O1 . . 45.2(2) n Na P2 C1 O1 1_655 . 169.1(2) n O23 P2 C1 C2 . . -43.9(3) n O22 P2 C1 C2 . . -174.0(2) n O21 P2 C1 C2 . . 71.1(2) n Na P2 C1 C2 . . 168.9(2) n Na P2 C1 C2 1_655 . -67.2(2) n O23 P2 C1 P1 . . 75.0(2) n O22 P2 C1 P1 . . -55.1(2) n O21 P2 C1 P1 . . -170.01(15) n Na P2 C1 P1 . . -72.24(14) n Na P2 C1 P1 1_655 . 51.66(14) n O13 P1 C1 O1 . . -156.8(2) n O11 P1 C1 O1 . . 77.1(2) n O12 P1 C1 O1 . . -38.1(2) n O13 P1 C1 C2 . . 80.5(2) n O11 P1 C1 C2 . . -45.6(3) n O12 P1 C1 C2 . . -160.9(2) n O13 P1 C1 P2 . . -42.8(2) n O11 P1 C1 P2 . . -168.91(15) n O12 P1 C1 P2 . . 75.8(2) n O1 C1 C2 C3 . . 74.4(4) n P2 C1 C2 C3 . . -43.9(4) n P1 C1 C2 C3 . . -165.3(3) n C1 C2 C3 N . . -169.9(3) n C2 C3 N C4 . . 90.4(5) n C2 C3 N C5 . . -145.2(4) n