#------------------------------------------------------------------------------ #$Date: 2015-04-02 12:22:18 +0100 (Thu, 02 Apr 2015) $ #$Revision: 134621 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/71/2007138.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2007138 loop_ _publ_author_name 'Barrot, Mireia' 'Fabrias, Gemma' 'Camps, Francisco' 'Molins, Elies' 'Roig, Anna' 'Maniukiewicz, Waldemar' _publ_section_title ; 1,5,8,12-Tetrathiaspiro[6.6]tridecane ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 533 _journal_page_last 534 _journal_paper_doi 10.1107/S0108270197015138 _journal_volume 54 _journal_year 1998 _chemical_formula_moiety 'C9 H16 S4' _chemical_formula_sum 'C9 H16 S4' _chemical_formula_weight 252.47 _chemical_name_systematic ; 1,5,8,12-Tetrathiaspiro[6.6]tridecane ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _cell_angle_alpha 64.240(10) _cell_angle_beta 79.200(10) _cell_angle_gamma 85.350(10) _cell_formula_units_Z 4 _cell_length_a 10.4460(10) _cell_length_b 11.0450(10) _cell_length_c 11.3160(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 294(2) _cell_measurement_theta_max 19.44 _cell_measurement_theta_min 15.33 _cell_volume 1155.0(2) _computing_cell_refinement 'CAD4 Software' _computing_data_collection 'CAD4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'MolEN (Fair, 1990)' _computing_molecular_graphics 'PLATON (Spek, 1997)' _computing_publication_material PLATON _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS86 (Sheldrick, 1990)' _diffrn_ambient_temperature 294(2) _diffrn_measured_fraction_theta_full 0.998 _diffrn_measured_fraction_theta_max 0.998 _diffrn_measurement_device_type 'Enraf-Nonius CAD4' _diffrn_measurement_method '\w--2\q scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.0000 _diffrn_reflns_av_sigmaI/netI 0.0142 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 6979 _diffrn_reflns_theta_full 30.41 _diffrn_reflns_theta_max 30.41 _diffrn_reflns_theta_min 2.59 _diffrn_standards_decay_% 0.5 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.78 _exptl_absorpt_correction_T_max 0.6748 _exptl_absorpt_correction_T_min 0.5686 _exptl_absorpt_correction_type psi-scan _exptl_absorpt_process_details '(North, Phillips & Mathews, 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.452 _exptl_crystal_density_meas ? _exptl_crystal_description prism _exptl_crystal_F_000 536 _exptl_crystal_size_max 0.82 _exptl_crystal_size_mid 0.67 _exptl_crystal_size_min 0.55 _refine_diff_density_max 0.805 _refine_diff_density_min -0.554 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.122 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 235 _refine_ls_number_reflns 6979 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.122 _refine_ls_R_factor_all 0.0355 _refine_ls_R_factor_gt 0.0294 _refine_ls_shift/su_max 0.006 _refine_ls_shift/su_mean 0.002 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0439P)^2^+0.2769P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.0876 _reflns_number_gt 6226 _reflns_number_total 6979 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file ab1520.cif _[local]_cod_data_source_block mr1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'Not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0439P)^2^+0.2769P] where P = (Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0439P)^2^+0.2769P] where P = (Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 1155.02(18) _cod_database_code 2007138 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy S1 -.03753(4) .22740(4) -.37587(3) .03940(10) Uani 1.000 S5 -.22845(5) .00885(4) -.07067(4) .04980(10) Uani 1.000 S8 -.25574(3) .34483(3) -.23475(4) .03670(10) Uani 1.000 S12 -.01648(4) .42563(4) -.12045(4) .04380(10) Uani 1.000 C2 -.16787(17) .13320(16) -.38255(16) .0445(4) Uani 1.000 C3 -.15875(19) -.01908(16) -.31043(17) .0499(5) Uani 1.000 C4 -.1383(2) -.07427(15) -.16687(17) .0536(5) Uani 1.000 C6 -.11227(15) .13434(14) -.09753(13) .0387(4) Uani 1.000 C7 -.09769(11) .26140(12) -.22902(12) .0297(3) Uani 1.000 C9 -.21911(15) .52011(14) -.34287(15) .0423(4) Uani 1.000 C10 -.19619(15) .60391(14) -.27190(18) .0458(4) Uani 1.000 C11 -.06319(16) .59184(16) -.23211(19) .0486(5) Uani 1.000 C13 .01428(12) .34675(15) -.23295(15) .0382(4) Uani 1.000 S1' -.57085(3) -.29919(3) -.40011(3) .03470(10) Uani 1.000 S5' -.56380(3) -.54467(3) -.09804(3) .03530(10) Uani 1.000 S8' -.77926(3) -.17224(3) -.26346(3) .03520(10) Uani 1.000 S12' -.54142(4) -.12579(3) -.12889(4) .04100(10) Uani 1.000 C2' -.67354(14) -.42961(14) -.38741(14) .0387(4) Uani 1.000 C3' -.61943(16) -.57158(15) -.32124(15) .0426(4) Uani 1.000 C4' -.63653(16) -.63367(13) -.17066(15) .0411(4) Uani 1.000 C6' -.67341(12) -.40412(11) -.12419(12) .0296(3) Uani 1.000 C7' -.63105(11) -.27427(11) -.24967(11) .0268(3) Uani 1.000 C9' -.72192(16) -.00337(13) -.37439(14) .0427(4) Uani 1.000 C10' -.68861(18) .07826(14) -.30447(17) .0480(5) Uani 1.000 C11' -.56156(17) .04507(14) -.25095(17) .0475(4) Uani 1.000 C13' -.51218(12) -.20977(12) -.23618(13) .0331(3) Uani 1.000 H2A -.24970 .16130 -.34530 .0530 Uiso 1.000 H2B -.17070 .15730 -.47530 .0530 Uiso 1.000 H3A -.23830 -.05750 -.31210 .0600 Uiso 1.000 H3B -.08730 -.04920 -.35950 .0600 Uiso 1.000 H4A -.04620 -.06870 -.16650 .0640 Uiso 1.000 H4B -.16200 -.16870 -.12270 .0640 Uiso 1.000 H6A -.13540 .16200 -.02580 .0460 Uiso 1.000 H6B -.02750 .09160 -.08950 .0460 Uiso 1.000 H9A -.14200 .52520 -.40780 .0510 Uiso 1.000 H9B -.29080 .55930 -.39110 .0510 Uiso 1.000 H10A -.21030 .69760 -.32930 .0550 Uiso 1.000 H10B -.26160 .57930 -.19210 .0550 Uiso 1.000 H11A -.06080 .65180 -.19040 .0580 Uiso 1.000 H11B .00180 .62330 -.31250 .0580 Uiso 1.000 H13A .03590 .41650 -.32290 .0460 Uiso 1.000 H13B .09030 .28960 -.21370 .0460 Uiso 1.000 H2C -.75820 -.42490 -.33690 .0460 Uiso 1.000 H2D -.68610 -.41250 -.47610 .0460 Uiso 1.000 H3C -.66120 -.62970 -.34690 .0510 Uiso 1.000 H3D -.52710 -.56980 -.35630 .0510 Uiso 1.000 H4C -.60030 -.72370 -.14070 .0490 Uiso 1.000 H4D -.72920 -.64240 -.13570 .0490 Uiso 1.000 H6C -.75790 -.43060 -.12890 .0360 Uiso 1.000 H6D -.68410 -.38460 -.04720 .0360 Uiso 1.000 H9C -.64490 -.00870 -.43490 .0510 Uiso 1.000 H9D -.78840 .04420 -.42730 .0510 Uiso 1.000 H10C -.68670 .17250 -.36660 .0580 Uiso 1.000 H10D -.75880 .06670 -.23090 .0580 Uiso 1.000 H11C -.55200 .10540 -.21140 .0570 Uiso 1.000 H11D -.49090 .06440 -.32570 .0570 Uiso 1.000 H13C -.47380 -.14540 -.32430 .0400 Uiso 1.000 H13D -.44800 -.27960 -.20410 .0400 Uiso 1.000 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 S1 .0415(2) .0428(2) .0343(2) -.00380(10) -.00070(10) -.01850(10) S5 .0670(3) .0344(2) .0416(2) -.0093(2) .0079(2) -.01550(10) S8 .02460(10) .0314(2) .0501(2) .00060(10) -.00630(10) -.01380(10) S12 .0407(2) .0516(2) .0501(2) .0016(2) -.0128(2) -.0302(2) C2 .0539(8) .0442(7) .0421(7) -.0005(6) -.0193(6) -.0202(6) C3 .0621(10) .0438(8) .0525(9) -.0016(7) -.0112(7) -.0278(7) C4 .0793(12) .0325(7) .0469(8) .0074(7) -.0077(8) -.0175(6) C6 .0481(7) .0343(6) .0324(6) .0059(5) -.0118(5) -.0122(5) C7 .0266(5) .0303(5) .0323(5) .0021(4) -.0066(4) -.0133(4) C9 .0406(7) .0327(6) .0460(7) .0032(5) -.0133(6) -.0080(5) C10 .0436(7) .0310(6) .0589(9) .0030(5) -.0051(6) -.0175(6) C11 .0454(8) .0416(7) .0643(10) -.0064(6) -.0031(7) -.0291(7) C13 .0257(5) .0457(7) .0511(8) .0000(5) -.0055(5) -.0285(6) S1' .0395(2) .0341(2) .02750(10) .00000(10) -.00060(10) -.01240(10) S5' .0444(2) .02690(10) .0369(2) .00570(10) -.01700(10) -.01280(10) S8' .03020(10) .0326(2) .0429(2) .00570(10) -.00820(10) -.01630(10) S12' .0525(2) .0347(2) .0397(2) -.00450(10) -.01230(10) -.01690(10) C2' .0438(7) .0424(7) .0378(6) .0037(5) -.0145(5) -.0221(6) C3' .0519(8) .0395(7) .0480(8) .0040(6) -.0144(6) -.0277(6) C4' .0513(8) .0283(6) .0472(7) -.0018(5) -.0126(6) -.0174(5) C6' .0329(5) .0259(5) .0280(5) -.0004(4) -.0029(4) -.0106(4) C7' .0274(5) .0244(5) .0278(5) .0015(4) -.0045(4) -.0108(4) C9' .0538(8) .0302(6) .0370(7) .0097(6) -.0104(6) -.0083(5) C10' .0630(10) .0265(6) .0505(8) .0052(6) -.0061(7) -.0151(6) C11' .0604(9) .0283(6) .0526(8) -.0072(6) -.0049(7) -.0168(6) C13' .0309(5) .0292(5) .0401(6) -.0006(4) -.0075(5) -.0149(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2 S1 C7 104.34(7) yes C4 S5 C6 100.95(8) yes C7 S8 C9 104.58(7) yes C11 S12 C13 99.93(8) yes S1 C2 C3 116.12(13) yes C2 C3 C4 115.54(15) no S5 C4 C3 115.66(14) yes S5 C6 C7 118.30(10) yes S1 C7 S8 113.23(7) yes S1 C7 C6 113.24(10) yes S1 C7 C13 101.65(9) no S8 C7 C6 106.35(9) no S8 C7 C13 113.98(10) no C6 C7 C13 108.46(11) no S8 C9 C10 114.77(11) no C9 C10 C11 116.68(15) no S12 C11 C10 116.31(13) no S12 C13 C7 116.32(10) no C2' S1' C7' 104.65(6) yes C4' S5' C6' 101.08(7) yes C7' S8' C9' 103.92(7) yes C11' S12' C13' 99.64(7) yes S1' C2' C3' 114.15(11) yes C2' C3' C4' 115.94(14) no S5' C4' C3' 116.70(12) yes S5' C6' C7' 115.65(9) yes S1' C7' S8' 112.22(6) yes S1' C7' C6' 114.44(9) yes S1' C7' C13' 102.06(8) no S8' C7' C6' 102.72(8) no S8' C7' C13' 114.56(9) no C6' C7' C13' 111.29(10) no S8' C9' C10' 114.56(11) no C9' C10' C11' 116.85(15) no S12' C11' C10' 117.04(13) no S12' C13' C7' 116.91(9) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag S1 C2 . . 1.8107(19) yes S1 C7 . . 1.8467(14) yes S5 C4 . . 1.8053(19) yes S5 C6 . . 1.8041(17) yes S8 C7 . . 1.8223(13) yes S8 C9 . . 1.8103(17) yes S12 C11 . . 1.810(2) no S12 C13 . . 1.8023(18) no C2 C3 . . 1.521(3) no C3 C4 . . 1.518(2) no C6 C7 . . 1.5301(19) no C7 C13 . . 1.543(2) no C9 C10 . . 1.521(2) no C10 C11 . . 1.518(2) no S1' C2' . . 1.8053(17) yes S1' C7' . . 1.8296(12) yes S5' C4' . . 1.8100(17) yes S5' C6' . . 1.8022(14) yes S8' C7' . . 1.8292(13) yes S8' C9' . . 1.8104(16) yes S12' C11' . . 1.8145(18) no S12' C13' . . 1.7949(15) no C2' C3' . . 1.528(2) no C3' C4' . . 1.515(2) no C6' C7' . . 1.5383(17) no C7' C13' . . 1.5433(18) no C9' C10' . . 1.528(2) no C10' C11' . . 1.514(3) no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C7 S1 C2 C3 92.07(13) no C2 S1 C7 S8 54.82(10) no C2 S1 C7 C6 -66.35(11) no C2 S1 C7 C13 177.51(10) no C6 S5 C4 C3 91.79(15) no C4 S5 C6 C7 -79.00(13) no C9 S8 C7 S1 80.25(9) no C9 S8 C7 C6 -154.77(10) no C9 S8 C7 C13 -35.32(11) no C7 S8 C9 C10 91.21(12) no C13 S12 C11 C10 -72.60(14) no C11 S12 C13 C7 97.30(12) no S1 C2 C3 C4 -51.6(2) no C2 C3 C4 S5 -39.7(2) no S5 C6 C7 S1 63.39(13) no S5 C6 C7 S8 -61.58(13) no S5 C6 C7 C13 175.42(10) no S1 C7 C13 S12 -170.24(8) no S8 C7 C13 S12 -48.06(13) no C6 C7 C13 S12 70.19(14) no S8 C9 C10 C11 -79.22(17) no C9 C10 C11 S12 59.56(19) no C7' S1' C2' C3' 92.53(11) no C2' S1' C7' S8' 78.86(8) no C2' S1' C7' C6' -37.68(10) no C2' S1' C7' C13' -158.01(9) no C6' S5' C4' C3' -73.58(13) no C4' S5' C6' C7' 95.65(10) no C9' S8' C7' S1' 74.12(8) no C9' S8' C7' C6' -162.49(9) no C9' S8' C7' C13' -41.66(10) no C7' S8' C9' C10' 91.85(13) no C13' S12' C11' C10' -74.85(14) no C11' S12' C13' C7' 94.85(11) no S1' C2' C3' C4' -78.65(16) no C2' C3' C4' S5' 59.18(18) no S5' C6' C7' S1' -45.04(12) no S5' C6' C7' S8' -166.94(7) no S5' C6' C7' C13' 70.01(12) no S1' C7' C13' S12' -163.14(7) no S8' C7' C13' S12' -41.62(12) no C6' C7' C13' S12' 74.36(13) no S8' C9' C10' C11' -76.11(17) no C9' C10' C11' S12' 59.17(18) no