#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/74/2007422.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2007422 loop_ _publ_author_name 'Masakazu Sato' 'Keita Matsumoto' 'Yutaka Kawashima' 'Kazuyuki Tomisawa' _publ_section_title ; Methyl Ester of the Bioactive Metabolite of Thromboxane A2 Receptor Antagonist ON-579 ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 982 _journal_page_last 984 _journal_paper_doi 10.1107/S0108270198000158 _journal_volume 54 _journal_year 1998 _chemical_formula_sum 'C17 H16 Cl F2 N O6 S2' _chemical_formula_weight 467.90 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _atom_type_scat_source 'Waasmaier & Kirfel (1995)' _cell_angle_alpha 90.000000000 _cell_angle_beta 99.05(3) _cell_angle_gamma 90.000000000 _cell_formula_units_Z 4 _cell_length_a 10.250(4) _cell_length_b 19.183(5) _cell_length_c 10.077(5) _cell_measurement_reflns_used 20 _cell_measurement_temperature 288 _cell_measurement_theta_max 30.0 _cell_measurement_theta_min 27.5 _cell_volume 1956.7(13) _diffrn_measurement_device 'MacScience MXC18' _diffrn_measurement_method \q/2\q _diffrn_radiation_type 'Cu K\a' _diffrn_radiation_wavelength 1.5418 _diffrn_reflns_av_R_equivalents 0.034 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 22 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3593 _diffrn_reflns_theta_max 63.81 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 200 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 4.234 _exptl_absorpt_correction_T_max 0.468 _exptl_absorpt_correction_T_min 0.338 _exptl_absorpt_correction_type 'spherical (Mackay et al., 1997)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.588 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_size_max 0.4 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.3 _refine_diff_density_max 0.74 _refine_diff_density_min -0.41 _refine_ls_extinction_coef 1.904 _refine_ls_extinction_method 'Larson (1970)' _refine_ls_goodness_of_fit_obs 3.267 _refine_ls_hydrogen_treatment refxyz _refine_ls_number_parameters 327 _refine_ls_number_reflns 2787 _refine_ls_R_factor_obs .052 _refine_ls_shift/esd_max 0.0834 _refine_ls_structure_factor_coef F _refine_ls_weighting_scheme 'Count statistics' _refine_ls_wR_factor_obs .048 _reflns_number_observed 2787 _reflns_number_total 3218 _reflns_observed_criterion refl_observed_if_I_>_3.00_sigma(I) _cod_data_source_file de1071.cif _cod_data_source_block de1071 _cod_depositor_comments ; The following automatic conversions were performed: '_atom_site_thermal_displace_type' tag value 'Uij' was replaced with 'Uani' value 29 times. Automatic conversion script Id: cif_fix_values 1646 2011-03-28 12:23:43Z adriana ; _cod_original_cell_volume 1957.0(10) _cod_original_sg_symbol_H-M 'P 21/c' _cod_original_formula_sum 'C17 H16 Cl1 F2 N1 O6 S2' _cod_database_code 2007422 _cod_database_fobs_code 2007422 loop_ _symmetry_equiv_pos_as_xyz +X,+Y,+Z -X,-Y,-Z -X,+Y+0.5,-Z+0.5 +X,-Y+0.5,+Z+0.5 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 .0664(3) .0868(4) .1121(4) .0296(3) .0264(3) .0234(3) S2 .0471(2) .0581(2) .0449(2) -.0020(2) .0028(2) .0040(2) N3 .0515(8) .0453(8) .0497(8) .0055(6) -.0058(6) .0023(6) O4 .0590(7) .0691(8) .0760(9) -.0197(6) .0022(6) .0164(7) O5 .0722(8) .1030(10) .0423(7) .0101(7) .0101(6) -.0094(7) C6 .0481(9) .0680(10) .0474(9) .0079(9) -.0005(7) .0013(9) C7 .0820(10) .0440(10) .0670(10) .0160(10) .0130(10) .0015(9) C8 .0580(10) .0550(10) .0580(10) .0152(9) .0071(9) .0192(9) C9 .0490(10) .0700(10) .0540(10) -.0037(9) -.0067(8) -.0003(9) C10 .0530(10) .0610(10) .0437(9) -.0007(8) .0006(7) -.0091(8) C11 .0527(9) .0424(8) .0374(8) .0004(7) -.0008(7) .0085(7) C12 .0640(10) .0443(9) .0610(10) -.0010(9) -.0018(9) -.0018(8) C13 .0490(10) .0550(10) .0550(10) .0004(8) -.0079(8) .0030(9) S14 .0457(2) .0506(2) .0537(2) -.0014(2) -.0064(2) .0003(2) C15 .0427(8) .0470(9) .0491(9) .0010(7) -.0065(7) .0019(7) C16 .0476(9) .0620(10) .0441(9) .0022(8) .0041(7) .0042(8) C17 .0539(9) .0600(10) .0340(8) .0032(8) -.0045(7) .0044(8) C18 .0425(8) .0489(9) .0421(8) -.0012(7) -.0055(7) .0017(7) C19 .0450(8) .0502(9) .0485(9) -.0008(7) .0030(7) .0093(7) C20 .0505(9) .0540(10) .0434(9) .0024(8) -.0078(7) .0081(8) F21 .0549(6) .0957(8) .0539(6) -.0012(5) .0031(5) .0282(6) F22 .0662(6) .1280(10) .0339(5) .0031(6) -.0079(4) .0125(6) O23 .0450(6) .0674(8) .0503(6) -.0041(5) -.0089(5) .0150(6) C24 .0490(10) .0630(10) .0470(10) -.0013(9) -.0143(8) .0040(9) C25 .0399(8) .0620(10) .0444(9) .0019(8) -.0034(7) .0041(8) O26 .0684(7) .0651(8) .0494(7) -.0091(6) -.0146(6) -.0002(6) O27 .0614(7) .0746(8) .0420(6) -.0024(6) -.0131(5) .0123(6) C28 .0640(10) .080(2) .0690(10) -.0030(10) .0030(10) .0290(10) O29 .0560(7) .0621(7) .0661(8) -.0053(6) .0052(6) .0122(6) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy Cl1 -.66728(5) .24562(3) -.18528(6) .0885(3) Uani 1.00 S2 -.08525(4) .18127(2) -.25353(4) .0507(2) Uani 1.00 N3 -.03710(10) .12287(7) -.14140(10) .0500(7) Uani 1.00 O4 -.00630(10) .24178(6) -.22300(10) .0691(7) Uani 1.00 O5 -.08900(10) .14714(7) -.38160(10) .0729(8) Uani 1.00 C6 -.0114(2) .14270(10) .0016(2) .0550(10) Uani 1.00 C7 -.4050(2) .27140(9) -.1423(2) .0650(10) Uani 1.00 C8 -.5053(2) .22956(9) -.2053(2) .0580(10) Uani 1.00 C9 -.4781(2) .17440(10) -.2837(2) .0590(10) Uani 1.00 C10 -.3510(2) .16060(10) -.2988(2) .0534(9) Uani 1.00 C11 -.2481(2) .20252(8) -.23770(10) .0449(8) Uani 1.00 C12 -.2759(2) .25797(9) -.1579(2) .0570(10) Uani 1.00 C13 .1369(2) .13817(9) .0552(2) .0545(9) Uani 1.00 S14 .18852(4) .04815(2) .06159(4) .0512(2) Uani 1.00 C15 .36110(10) .06235(8) .1211(2) .0474(8) Uani 1.00 C16 .4115(2) .04710(9) .2547(2) .0518(9) Uani 1.00 C17 .5460(2) .05199(9) .29280(10) .0504(9) Uani 1.00 C18 .63320(10) .06833(8) .2087(2) .0455(8) Uani 1.00 C19 .5759(2) .08515(8) .0762(2) .0486(8) Uani 1.00 C20 .4429(2) .08200(9) .0327(2) .0506(9) Uani 1.00 F21 .65911(9) .10189(6) -.00895(9) .0689(6) Uani 1.00 F22 .59439(9) .03881(6) .42504(9) .0772(7) Uani 1.00 O23 .76730(10) .07242(6) .23290(10) .0555(6) Uani 1.00 C24 .8433(2) .03850(10) .3468(2) .0540(10) Uani 1.00 C25 .80630(10) -.03527(9) .3604(2) .0495(9) Uani 1.00 O26 .73940(10) -.07057(6) .27770(10) .0627(7) Uani 1.00 O27 .85950(10) -.05896(6) .48220(10) .0609(7) Uani 1.00 C28 .8337(2) -.13070(10) .5123(2) .0720(10) Uani 1.00 O29 .13120(10) .01658(6) .17550(10) .0621(7) Uani 1.00 H3 -.068(2) .0749(9) -.150(2) .043(6) Uiso 1.00 H6A -.072(2) .1148(9) .048(2) .029(5) Uiso 1.00 H6B -.046(2) .1897(9) .013(2) .031(5) Uiso 1.00 H7 -.428(2) .3122(9) -.101(2) .035(5) Uiso 1.00 H9 -.541(2) .1453(9) -.313(2) .034(5) Uiso 1.00 H10 -.322(2) .1263(9) -.337(2) .023(5) Uiso 1.00 H12 -.2060(10) .2868(8) -.1300(10) .018(4) Uiso 1.00 H13A .199(2) .1600(8) -.004(2) .030(5) Uiso 1.00 H13B .164(2) .1500(10) .140(2) .059(7) Uiso 1.00 H16 .3590(10) .0388(8) .312(2) .021(4) Uiso 1.00 H20 .4090(10) .0948(8) -.056(2) .029(5) Uiso 1.00 H24A .9390(10) .0400(8) .3240(10) .021(4) Uiso 1.00 H24B .817(2) .0600(10) .412(2) .054(7) Uiso 1.00 H28A .846(2) -.1640(10) .431(2) .076(8) Uiso 1.00 H28B .742(2) -.1336(8) .526(2) .030(5) Uiso 1.00 H28C .900(2) -.1430(10) .575(2) .060(7) Uiso 1.00 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N3 S2 O4 108.30(10) yes N3 S2 O5 105.90(10) yes N3 S2 C11 106.80(10) yes O4 S2 O5 119.90(10) yes O4 S2 C11 108.00(10) yes O5 S2 C11 107.20(10) yes S2 N3 C6 119.6(2) yes N3 C6 C13 110.2(2) yes C8 C7 C12 119.8(2) yes Cl1 C8 C7 120.1(2) yes Cl1 C8 C9 119.3(2) yes C7 C8 C9 120.6(2) yes C8 C9 C10 119.9(2) yes C9 C10 C11 120.7(2) yes S2 C11 C10 119.5(2) yes S2 C11 C12 121.1(2) yes C10 C11 C12 119.2(2) yes C7 C12 C11 119.7(2) yes C6 C13 S14 109.6(2) yes C13 S14 C15 97.70(10) yes C13 S14 O29 105.40(10) yes C15 S14 O29 106.90(10) yes S14 C15 C16 119.1(2) yes S14 C15 C20 119.8(2) yes C16 C15 C20 120.9(2) yes C15 C16 C17 117.3(2) yes C16 C17 C18 124.7(2) yes C16 C17 F22 116.9(2) yes C18 C17 F22 118.4(2) yes C17 C18 C19 115.2(2) yes C17 C18 O23 130.2(2) yes C19 C18 O23 114.6(2) yes C18 C19 C20 122.7(2) yes C18 C19 F21 116.6(2) yes C20 C19 F21 120.6(2) yes C15 C20 C19 119.1(2) yes C18 O23 C24 121.5(2) yes O23 C24 C25 113.1(2) yes C24 C25 O26 127.1(2) yes C24 C25 O27 109.6(2) yes O26 C25 O27 123.3(2) yes C25 O27 C28 117.0(2) yes S2 N3 H3 122.6(11) no C6 N3 H3 109.4(11) no N3 C6 H6A 107.1(10) no N3 C6 H6B 109.8(10) no C13 C6 H6A 117.6(10) no C13 C6 H6B 111.7(10) no H6A C6 H6B 100.0(14) no C8 C7 H7 118.0(11) no C12 C7 H7 121.5(11) no C8 C9 H9 118.8(12) no C10 C9 H9 120.7(12) no C9 C10 H10 128.2(12) no C11 C10 H10 111.0(11) no C7 C12 H12 124.5(10) no C11 C12 H12 115.1(10) no C6 C13 H13A 116.1(9) no C6 C13 H13B 118.0(13) no S14 C13 H13A 101.8(9) no S14 C13 H13B 99.6(13) no H13A C13 H13B 109.1(16) no C15 C16 H16 120.7(11) no C17 C16 H16 121.8(11) no C15 C20 H20 121.1(10) no C19 C20 H20 119.8(10) no O23 C24 H24A 102.9(8) no O23 C24 H24B 101.6(14) no C25 C24 H24A 108.1(9) no C25 C24 H24B 105.6(14) no H24A C24 H24B 125.4(16) no O27 C28 H28A 111.2(12) no O27 C28 H28B 107.3(10) no O27 C28 H28C 105.1(14) no H28A C28 H28B 108.1(15) no H28A C28 H28C 102.6(18) no H28B C28 H28C 122.3(17) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cl1 C8 1.731(2) yes S2 N3 1.612(2) yes S2 O4 1.421(2) yes S2 O5 1.442(2) yes S2 C11 1.749(2) yes N3 C6 1.474(3) yes C6 C13 1.533(3) yes C7 C8 1.379(3) yes C7 C12 1.381(3) yes C8 C9 1.374(3) yes C9 C10 1.361(3) yes C10 C11 1.391(3) yes C11 C12 1.390(3) yes C13 S14 1.804(2) yes S14 C15 1.797(2) yes S14 O29 1.498(2) yes C15 C16 1.395(3) yes C15 C20 1.369(3) yes C16 C17 1.375(3) yes C17 C18 1.362(3) yes C17 F22 1.370(2) yes C18 C19 1.409(3) yes C18 O23 1.359(2) yes C19 C20 1.365(3) yes C19 F21 1.341(2) yes O23 C24 1.438(3) yes C24 C25 1.477(3) yes C25 O26 1.202(2) yes C25 O27 1.342(2) yes O27 C28 1.442(3) yes N3 H3 .97(2) no C6 H6A .99(2) no C6 H6B .98(2) no C7 H7 .94(2) no C9 H9 .87(2) no C10 H10 .84(2) no C12 H12 .91(2) no C13 H13A 1.03(2) no C13 H13B .89(3) no C16 H16 .87(2) no C20 H20 .94(2) no C24 H24A 1.04(2) no C24 H24B .86(2) no C28 H28A 1.07(3) no C28 H28B .98(2) no C28 H28C .89(3) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 8519998 2 PubChem 139056087