#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/81/2008153.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008153 loop_ _publ_author_name 'Helliwell, Madeleine' 'Dinsmore, Andrew' 'Garner, C. David' 'Joule, John A.' _publ_contact_author ; John A. Joule Chemistry Department The University of Manchester Manchester M13 9PL England ; _publ_section_title ; A 1-alkylated pteridine, C~15~H~19~ClN~6~O~3~ ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 254 _journal_page_last 256 _journal_paper_doi 10.1107/S0108270198011883 _journal_volume 55 _journal_year 1999 _chemical_formula_sum 'C15 H19 Cl N6 O3' _chemical_formula_weight 366.81 _chemical_name_systematic ; 6-chloro-2-(N,N-dimethylaminomethyleneamino)-1-(2,2-pivaloyloxymethyl) pteridin-4-one ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 106.623(7) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.7770(11) _cell_length_b 9.3742(5) _cell_length_c 17.0675(15) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296(2) _cell_measurement_theta_max 17.0 _cell_measurement_theta_min 14.4 _cell_volume 1805.5(3) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1989) ; _computing_data_reduction 'TEXSAN (Molecular Structure Corporation, 1995)' _computing_publication_material TEXSAN _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SIR92 (Altomare et al., 1993)' _diffrn_ambient_temperature 296.2 _diffrn_measured_fraction_theta_full 0.890 _diffrn_measured_fraction_theta_max 0.890 _diffrn_measurement_device 'Rigaku AFC-5R' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'Rigaku rotating anode' _diffrn_radiation_type 'Cu K\a' _diffrn_radiation_wavelength 1.5418 _diffrn_reflns_av_R_equivalents 0.029 _diffrn_reflns_av_sigmaI/netI 0.047 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -11 _diffrn_reflns_limit_k_max 11 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 21 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 3883 _diffrn_reflns_reduction_process 'Lp corrections applied' _diffrn_reflns_theta_full 79.45 _diffrn_reflns_theta_max 79.45 _diffrn_reflns_theta_min 4.07 _diffrn_standards_decay_% 1.73 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 2.122 _exptl_absorpt_correction_T_max 0.809 _exptl_absorpt_correction_T_min 0.637 _exptl_absorpt_correction_type ; \y scans (North et al., 1968) ; _exptl_crystal_colour orange _exptl_crystal_density_diffrn 1.349 _exptl_crystal_density_meas ? _exptl_crystal_description tabular _exptl_crystal_F_000 768.00 _exptl_crystal_size_max 0.35 _exptl_crystal_size_mid 0.17 _exptl_crystal_size_min 0.10 _refine_diff_density_max 0.204 _refine_diff_density_min -0.183 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.073 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 231 _refine_ls_number_reflns 3697 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.073 _refine_ls_R_factor_all 0.114 _refine_ls_R_factor_gt 0.055 _refine_ls_shift/su_max 0.004 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0489P)^2^+1.562P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.167 _reflns_number_gt 2168 _reflns_number_total 3697 _reflns_threshold_expression I>2\s(I) _cod_data_source_file gd1002.cif _cod_data_source_block s660 _cod_depositor_comments ; The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0489P)^2^+1.562P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0489P)^2^+1.562P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2008153 _cod_database_fobs_code 2008153 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl1 0.08434(9) 0.17990(13) 0.82344(7) 0.0867(4) Uani d . 1 . . Cl O1 0.5163(2) 0.2705(3) 1.00055(16) 0.0700(8) Uani d . 1 . . O O2 0.3302(2) -0.1383(3) 1.21625(14) 0.0597(7) Uani d . 1 . . O O3 0.4398(3) -0.3008(3) 1.30057(17) 0.0764(8) Uani d . 1 . . O N1 0.4063(2) -0.0556(3) 1.11305(16) 0.0494(7) Uani d . 1 . . N N2 0.5475(2) 0.1248(3) 1.11056(16) 0.0495(7) Uani d . 1 . . N N3 0.2870(2) 0.1705(3) 0.93634(16) 0.0519(7) Uani d . 1 . . N N4 0.2243(3) -0.0702(3) 1.01207(18) 0.0600(8) Uani d . 1 . . N N5 0.5766(2) -0.0386(3) 1.21891(16) 0.0519(7) Uani d . 1 . . N N6 0.7560(2) -0.0240(3) 1.31793(17) 0.0567(8) Uani d . 1 . . N C1 0.5131(3) 0.0151(4) 1.14651(19) 0.0472(8) Uani d . 1 . . C C2 0.4803(3) 0.1765(4) 1.0375(2) 0.0500(8) Uani d . 1 . . C C3 0.3610(3) 0.1138(4) 1.00385(18) 0.0455(8) Uani d . 1 . . C C4 0.1843(3) 0.1059(4) 0.9084(2) 0.0577(10) Uani d . 1 . . C C5 0.1530(3) -0.0139(4) 0.9445(2) 0.0648(11) Uani d . 1 . . C H5 0.0798 -0.0563 0.9209 0.078 Uiso calc R 1 . . H C6 0.3286(3) -0.0033(4) 1.04180(19) 0.0482(8) Uani d . 1 . . C C7 0.6858(3) 0.0088(4) 1.2468(2) 0.0551(9) Uani d . 1 . . C H7 0.7143 0.0693 1.2135 0.066 Uiso calc R 1 . . H C8 0.8783(3) 0.0270(5) 1.3453(3) 0.0806(13) Uani d . 1 . . C H8A 0.8948 0.0834 1.3029 0.121 Uiso calc R 1 . . H H8B 0.9313 -0.0530 1.3574 0.121 Uiso calc R 1 . . H H8C 0.8891 0.0841 1.3935 0.121 Uiso calc R 1 . . H C9 0.7174(4) -0.1125(6) 1.3747(3) 0.0910(16) Uani d . 1 . . C H9A 0.6995 -0.0535 1.4156 0.136 Uiso calc R 1 . . H H9B 0.7792 -0.1784 1.4005 0.136 Uiso calc R 1 . . H H9C 0.6478 -0.1645 1.3458 0.136 Uiso calc R 1 . . H C10 0.3790(3) -0.1824(4) 1.1519(2) 0.0586(9) Uani d . 1 . . C H10A 0.3221 -0.2406 1.1125 0.070 Uiso calc R 1 . . H H10B 0.4502 -0.2383 1.1743 0.070 Uiso calc R 1 . . H C11 0.3754(3) -0.1999(4) 1.2901(2) 0.0545(9) Uani d . 1 . . C C12 0.3328(3) -0.1250(4) 1.3547(2) 0.0588(10) Uani d . 1 . . C C13 0.3673(4) 0.0329(5) 1.3575(3) 0.0841(13) Uani d . 1 . . C H13A 0.4512 0.0409 1.3656 0.126 Uiso calc R 1 . . H H13B 0.3467 0.0788 1.4018 0.126 Uiso calc R 1 . . H H13C 0.3258 0.0779 1.3069 0.126 Uiso calc R 1 . . H C14 0.3916(4) -0.1932(5) 1.4373(3) 0.0866(14) Uani d . 1 . . C H14A 0.3738 -0.2933 1.4347 0.130 Uiso calc R 1 . . H H14B 0.3622 -0.1492 1.4784 0.130 Uiso calc R 1 . . H H14C 0.4758 -0.1800 1.4507 0.130 Uiso calc R 1 . . H C15 0.1988(4) -0.1399(7) 1.3344(3) 0.1033(18) Uani d . 1 . . C H15A 0.1621 -0.0919 1.2838 0.155 Uiso calc R 1 . . H H15B 0.1722 -0.0980 1.3773 0.155 Uiso calc R 1 . . H H15C 0.1778 -0.2391 1.3293 0.155 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 0.0707(6) 0.0874(8) 0.0753(7) 0.0066(6) -0.0219(5) 0.0030(6) O1 0.0592(15) 0.0805(19) 0.0625(16) -0.0131(14) 0.0048(12) 0.0178(15) O2 0.0500(13) 0.0728(18) 0.0541(15) 0.0051(12) 0.0112(11) 0.0181(13) O3 0.089(2) 0.0612(18) 0.0729(18) 0.0175(16) 0.0144(15) 0.0172(15) N1 0.0479(15) 0.0514(18) 0.0438(16) -0.0056(13) 0.0049(12) -0.0019(13) N2 0.0408(14) 0.0592(18) 0.0445(16) -0.0014(13) 0.0060(12) 0.0033(14) N3 0.0494(15) 0.0560(18) 0.0450(16) 0.0032(14) 0.0049(12) -0.0055(14) N4 0.0523(17) 0.0592(19) 0.0595(19) -0.0097(15) 0.0016(14) -0.0087(16) N5 0.0434(15) 0.064(2) 0.0443(16) 0.0025(14) 0.0055(12) 0.0005(14) N6 0.0425(15) 0.071(2) 0.0489(17) 0.0091(14) 0.0000(13) 0.0015(15) C1 0.0432(17) 0.055(2) 0.0422(18) 0.0042(16) 0.0101(14) -0.0056(16) C2 0.0487(18) 0.054(2) 0.0455(19) 0.0001(16) 0.0111(15) -0.0003(17) C3 0.0424(17) 0.055(2) 0.0361(17) 0.0028(15) 0.0056(13) -0.0080(16) C4 0.054(2) 0.058(2) 0.053(2) 0.0034(18) 0.0007(16) -0.0120(18) C5 0.052(2) 0.068(3) 0.062(2) -0.0082(19) -0.0048(18) -0.013(2) C6 0.0497(18) 0.051(2) 0.0412(18) -0.0026(16) 0.0081(15) -0.0094(16) C7 0.054(2) 0.057(2) 0.051(2) 0.0037(18) 0.0094(16) 0.0010(18) C8 0.055(2) 0.091(3) 0.079(3) -0.008(2) -0.008(2) -0.001(3) C9 0.059(2) 0.147(5) 0.060(3) 0.016(3) 0.008(2) 0.032(3) C10 0.062(2) 0.052(2) 0.056(2) -0.0058(19) 0.0082(17) 0.0021(18) C11 0.0436(18) 0.052(2) 0.061(2) -0.0064(17) 0.0036(16) 0.0145(18) C12 0.0463(19) 0.071(3) 0.058(2) 0.0003(18) 0.0129(16) 0.014(2) C13 0.093(3) 0.075(3) 0.088(3) 0.006(3) 0.031(3) 0.001(3) C14 0.089(3) 0.103(4) 0.069(3) 0.007(3) 0.023(2) 0.020(3) C15 0.053(2) 0.165(5) 0.096(4) -0.004(3) 0.027(2) 0.014(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0181 0.0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0311 0.0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0492 0.0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.3639 0.7018 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 2 -2 -4 -1 -3 -1 -2 -2 4 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C11 O2 C10 116.9(3) no C6 N1 C1 119.0(3) no C6 N1 C10 121.1(3) no C1 N1 C10 119.9(3) no C1 N2 C2 121.9(3) no C4 N3 C3 115.7(3) no C5 N4 C6 115.2(3) no C7 N5 C1 115.8(3) no C7 N6 C9 121.7(3) no C7 N6 C8 121.9(3) no C9 N6 C8 116.4(3) no N2 C1 N5 123.7(3) no N2 C1 N1 122.8(3) no N5 C1 N1 113.5(3) no O1 C2 N2 122.1(3) no O1 C2 C3 121.0(3) no N2 C2 C3 116.9(3) no N3 C3 C6 121.3(3) no N3 C3 C2 119.2(3) no C6 C3 C2 119.5(3) no N3 C4 C5 123.3(3) no N3 C4 Cl1 117.0(3) no C5 C4 Cl1 119.7(3) no N4 C5 C4 121.8(3) no N4 C5 H5 119.1 no C4 C5 H5 119.1 no N4 C6 C3 122.6(3) no N4 C6 N1 118.0(3) no C3 C6 N1 119.3(3) no N6 C7 N5 123.7(4) no N6 C7 H7 118.2 no N5 C7 H7 118.2 no N6 C8 H8A 109.5 no N6 C8 H8B 109.5 no H8A C8 H8B 109.5 no N6 C8 H8C 109.5 no H8A C8 H8C 109.5 no H8B C8 H8C 109.5 no N6 C9 H9A 109.5 no N6 C9 H9B 109.5 no H9A C9 H9B 109.5 no N6 C9 H9C 109.5 no H9A C9 H9C 109.5 no H9B C9 H9C 109.5 no O2 C10 N1 107.7(3) no O2 C10 H10A 110.2 no N1 C10 H10A 110.2 no O2 C10 H10B 110.2 no N1 C10 H10B 110.2 no H10A C10 H10B 108.5 no O3 C11 O2 122.9(4) no O3 C11 C12 126.1(3) no O2 C11 C12 111.0(3) no C11 C12 C14 108.9(3) no C11 C12 C15 109.4(3) no C14 C12 C15 109.9(3) no C11 C12 C13 109.3(3) no C14 C12 C13 109.3(4) no C15 C12 C13 110.1(4) no C12 C13 H13A 109.5 no C12 C13 H13B 109.5 no H13A C13 H13B 109.5 no C12 C13 H13C 109.5 no H13A C13 H13C 109.5 no H13B C13 H13C 109.5 no C12 C14 H14A 109.5 no C12 C14 H14B 109.5 no H14A C14 H14B 109.5 no C12 C14 H14C 109.5 no H14A C14 H14C 109.5 no H14B C14 H14C 109.5 no C12 C15 H15A 109.5 no C12 C15 H15B 109.5 no H15A C15 H15B 109.5 no C12 C15 H15C 109.5 no H15A C15 H15C 109.5 no H15B C15 H15C 109.5 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cl1 C4 . 1.730(4) no O1 C2 . 1.228(4) no O2 C11 . 1.349(4) no O2 C10 . 1.438(4) no O3 C11 . 1.194(4) no N1 C6 . 1.386(4) no N1 C1 . 1.392(4) no N1 C10 . 1.442(4) no N2 C1 . 1.318(4) no N2 C2 . 1.361(4) no N3 C4 . 1.314(4) no N3 C3 . 1.340(4) no N4 C5 . 1.326(4) no N4 C6 . 1.342(4) no N5 C7 . 1.314(4) no N5 C1 . 1.346(4) no N6 C7 . 1.296(4) no N6 C9 . 1.445(5) no N6 C8 . 1.461(4) no C2 C3 . 1.479(4) no C3 C6 . 1.383(5) no C4 C5 . 1.382(5) no C5 H5 . 0.9300 no C7 H7 . 0.9300 no C8 H8A . 0.9600 no C8 H8B . 0.9600 no C8 H8C . 0.9600 no C9 H9A . 0.9600 no C9 H9B . 0.9600 no C9 H9C . 0.9600 no C10 H10A . 0.9700 no C10 H10B . 0.9700 no C11 C12 . 1.509(5) no C12 C14 . 1.522(5) no C12 C15 . 1.522(5) no C12 C13 . 1.532(6) no C13 H13A . 0.9600 no C13 H13B . 0.9600 no C13 H13C . 0.9600 no C14 H14A . 0.9600 no C14 H14B . 0.9600 no C14 H14C . 0.9600 no C15 H15A . 0.9600 no C15 H15B . 0.9600 no C15 H15C . 0.9600 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C2 N2 C1 N5 -179.6(3) no C2 N2 C1 N1 -0.1(5) no C7 N5 C1 N2 -10.9(5) no C7 N5 C1 N1 169.5(3) no C6 N1 C1 N2 -4.6(5) no C10 N1 C1 N2 174.5(3) no C6 N1 C1 N5 175.0(3) no C10 N1 C1 N5 -6.0(4) no C1 N2 C2 O1 -173.7(3) no C1 N2 C2 C3 6.0(5) no C4 N3 C3 C6 -1.4(5) no C4 N3 C3 C2 177.6(3) no O1 C2 C3 N3 -6.9(5) no N2 C2 C3 N3 173.4(3) no O1 C2 C3 C6 172.2(3) no N2 C2 C3 C6 -7.5(5) no C3 N3 C4 C5 -0.7(5) no C3 N3 C4 Cl1 177.7(2) no C6 N4 C5 C4 -0.6(6) no N3 C4 C5 N4 1.8(6) no Cl1 C4 C5 N4 -176.6(3) no C5 N4 C6 C3 -1.6(5) no C5 N4 C6 N1 178.9(3) no N3 C3 C6 N4 2.7(5) no C2 C3 C6 N4 -176.3(3) no N3 C3 C6 N1 -177.8(3) no C2 C3 C6 N1 3.1(5) no C1 N1 C6 N4 -177.8(3) no C10 N1 C6 N4 3.2(5) no C1 N1 C6 C3 2.7(5) no C10 N1 C6 C3 -176.3(3) no C9 N6 C7 N5 -2.6(6) no C8 N6 C7 N5 177.8(4) no C1 N5 C7 N6 174.9(3) no C11 O2 C10 N1 -131.6(3) no C6 N1 C10 O2 -97.3(3) no C1 N1 C10 O2 83.7(4) no C10 O2 C11 O3 -10.9(5) no C10 O2 C11 C12 169.6(3) no O3 C11 C12 C14 3.6(5) no O2 C11 C12 C14 -176.9(3) no O3 C11 C12 C15 -116.4(4) no O2 C11 C12 C15 63.1(4) no O3 C11 C12 C13 122.9(4) no O2 C11 C12 C13 -57.6(4) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 30652221 2 PubChem 10992194