#------------------------------------------------------------------------------ #$Date: 2016-02-14 14:26:36 +0000 (Sun, 14 Feb 2016) $ #$Revision: 176435 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/81/2008177.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008177 loop_ _publ_author_name 'Adnan S. Abu-Surrah' 'Kristian Lappalainen' 'Martti Klinga' 'Markku Leskel\"a' 'Hamdallah A. Hodali' 'Bernhard Rieger' _publ_section_title ;A dichloropalladium(II) complex with a mixed-donor bidentate ligand: dichloro[2-(diphenylphosphino)-1-(methylthio)ethane-P,S]palladium(II) ; _journal_issue 2 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 188 _journal_page_last 190 _journal_paper_doi 10.1107/S0108270198012773 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[PdCl~2~(C~15~H~17~PS)]' _chemical_formula_moiety 'C15 H17 Cl2 P Pd S' _chemical_formula_sum 'C15 H17 Cl2 P Pd S' _chemical_formula_weight 437.68 _chemical_name_systematic ' Dichloro[1-(thiomethyl)-2-(diphenylphosphino)ethane]palladium(II)' _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 93.63(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 11.360(3) _cell_length_b 12.237(2) _cell_length_c 11.717(2) _cell_measurement_reflns_used 24 _cell_measurement_temperature 193(2) _cell_measurement_theta_max 9.8 _cell_measurement_theta_min 3.0 _cell_volume 1625.5(6) _computing_cell_refinement TEXSAN _computing_data_collection 'TEXSAN (Molecular Structure Corporation, 1993)' _computing_data_reduction TEXSAN _computing_molecular_graphics SHELXTL/PC _computing_publication_material SHELXL93 _computing_structure_refinement 'SHELXL93 (Sheldrick, 1993)' _computing_structure_solution 'SHELXTL/PC (Sheldrick, 1990)' _diffrn_ambient_temperature 193(2) _diffrn_measurement_device 'Rigaku AFC7S' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.023 _diffrn_reflns_av_sigmaI/netI 0.061 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min -14 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 14 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3252 _diffrn_reflns_theta_max 26.48 _diffrn_reflns_theta_min 2.58 _diffrn_standards_decay_% <2 _diffrn_standards_interval_count 200 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.683 _exptl_absorpt_correction_T_max 0.777 _exptl_absorpt_correction_T_min 0.745 _exptl_absorpt_correction_type '\y-scan (North et al., 1968)' _exptl_crystal_colour Yellow _exptl_crystal_density_diffrn 1.788 _exptl_crystal_density_meas ? _exptl_crystal_description Prismatic _exptl_crystal_F_000 872 _exptl_crystal_size_max 0.21 _exptl_crystal_size_mid 0.18 _exptl_crystal_size_min 0.15 _refine_diff_density_max 0.437 _refine_diff_density_min -0.578 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.030 _refine_ls_goodness_of_fit_obs 1.070 _refine_ls_hydrogen_treatment 'H atoms refined isotropically' _refine_ls_matrix_type full _refine_ls_number_parameters 199 _refine_ls_number_reflns 3093 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.039 _refine_ls_restrained_S_obs 1.070 _refine_ls_R_factor_all 0.050 _refine_ls_R_factor_obs 0.037 _refine_ls_shift/esd_mean 0.000 _refine_ls_shift/su_max 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.077 _refine_ls_wR_factor_obs 0.073 _reflns_number_observed 2623 _reflns_number_total 3100 _reflns_observed_criterion I>2\s(I) _cod_data_source_file os1039.cif _cod_data_source_block ADNAN1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value ' calc w = 1/[\s^2^(Fo^2^)+P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/n' _cod_original_formula_sum 'C15 H17 Cl2 P1 Pd1 S1' _cod_database_code 2008177 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Pd 0.0195(2) 0.0216(2) 0.0220(2) -0.00044(14) -0.00002(11) 0.00092(13) Cl1 0.0340(6) 0.0396(6) 0.0265(6) -0.0003(5) 0.0000(5) -0.0086(5) Cl2 0.0231(5) 0.0324(6) 0.0426(6) 0.0026(5) -0.0043(5) -0.0001(5) S 0.0285(6) 0.0259(5) 0.0265(6) -0.0013(5) 0.0056(4) -0.0009(4) P 0.0208(5) 0.0212(5) 0.0219(5) 0.0007(4) -0.0011(4) 0.0012(4) C1 0.036(3) 0.043(3) 0.025(2) 0.001(2) -0.001(2) 0.001(2) C2 0.032(2) 0.026(2) 0.026(2) 0.000(2) -0.004(2) -0.002(2) C3 0.030(3) 0.056(3) 0.032(3) -0.008(2) 0.010(2) -0.001(2) C4 0.034(2) 0.022(2) 0.022(2) -0.001(2) -0.006(2) 0.002(2) C5 0.039(3) 0.028(2) 0.036(3) -0.006(2) 0.007(2) -0.003(2) C6 0.061(4) 0.028(3) 0.041(3) -0.011(3) -0.006(3) 0.003(2) C7 0.065(4) 0.022(2) 0.045(3) 0.001(3) -0.021(3) 0.001(2) C8 0.044(3) 0.035(3) 0.047(3) 0.012(2) -0.006(2) -0.009(2) C9 0.032(3) 0.031(2) 0.038(3) 0.002(2) -0.002(2) 0.003(2) C10 0.024(2) 0.025(2) 0.024(2) -0.001(2) 0.002(2) -0.002(2) C11 0.032(3) 0.032(2) 0.030(2) 0.000(2) -0.008(2) 0.000(2) C12 0.026(2) 0.046(3) 0.038(3) -0.004(2) 0.000(2) -0.010(2) C13 0.029(3) 0.034(3) 0.041(3) -0.009(2) 0.009(2) -0.010(2) C14 0.050(3) 0.025(2) 0.034(3) -0.007(2) 0.008(2) 0.000(2) C15 0.026(2) 0.021(2) 0.033(2) -0.002(2) 0.001(2) 0.003(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol Pd -0.01243(3) 0.17976(3) 0.57236(3) 0.02110(10) Uani d . 1 . Pd Cl1 -0.05836(10) 0.25612(10) 0.74443(9) 0.0334(3) Uani d . 1 . Cl Cl2 0.18117(9) 0.13145(9) 0.64206(10) 0.0330(3) Uani d . 1 . Cl S 0.02363(10) 0.11008(9) 0.39785(9) 0.0268(2) Uani d . 1 . S P -0.19303(9) 0.22024(9) 0.50116(9) 0.0214(2) Uani d . 1 . P C1 -0.0918(4) 0.1686(4) 0.2990(4) 0.0345(11) Uani d . 1 . C H1A -0.0715(4) 0.2450(4) 0.2804(4) 0.026(12) Uiso calc R 1 . H H1B -0.0979(4) 0.1260(4) 0.2271(4) 0.064(18) Uiso calc R 1 . H C2 -0.2082(4) 0.1656(4) 0.3551(3) 0.0284(10) Uani d . 1 . C H2A -0.2369(4) 0.0892(4) 0.3572(3) 0.016(10) Uiso calc R 1 . H H2B -0.2673(4) 0.2091(4) 0.3090(3) 0.025(12) Uiso calc R 1 . H C3 0.1519(4) 0.1776(5) 0.3491(4) 0.0392(12) Uani d . 1 . C H3A 0.1680(16) 0.1502(18) 0.2731(12) 0.039(14) Uiso calc R 1 . H H3B 0.2199(7) 0.163(2) 0.4026(14) 0.055(17) Uiso calc R 1 . H H3C 0.1378(10) 0.2565(5) 0.345(2) 0.047(16) Uiso calc R 1 . H C4 -0.2201(4) 0.3664(3) 0.4924(3) 0.0261(9) Uani d . 1 . C C5 -0.1393(4) 0.4313(4) 0.4405(4) 0.0340(11) Uani d . 1 . C H5A -0.0707(4) 0.3989(4) 0.4128(4) 0.045(15) Uiso calc R 1 . H C6 -0.1571(5) 0.5433(4) 0.4281(4) 0.0440(13) Uani d . 1 . C H6A -0.1019(5) 0.5865(4) 0.3905(4) 0.064(18) Uiso calc R 1 . H C7 -0.2544(5) 0.5913(4) 0.4702(4) 0.0449(14) Uani d . 1 . C H7A -0.2668(5) 0.6677(4) 0.4615(4) 0.033(13) Uiso calc R 1 . H C8 -0.3347(5) 0.5282(4) 0.5254(4) 0.0423(13) Uani d . 1 . C H8A -0.4011(5) 0.5616(4) 0.5564(4) 0.025(12) Uiso calc R 1 . H C9 -0.3181(4) 0.4164(4) 0.5354(4) 0.0337(11) Uani d . 1 . C H9A -0.3742(4) 0.3734(4) 0.5721(4) 0.037(14) Uiso calc R 1 . H C10 -0.3144(4) 0.1579(3) 0.5701(3) 0.0240(9) Uani d . 1 . C C11 -0.4291(4) 0.1702(4) 0.5196(4) 0.0319(10) Uani d . 1 . C H11A -0.4427(4) 0.2131(4) 0.4525(4) 0.042(15) Uiso calc R 1 . H C12 -0.5220(4) 0.1194(4) 0.5686(4) 0.0367(11) Uani d . 1 . C H12A -0.6000(4) 0.1289(4) 0.5360(4) 0.059(17) Uiso calc R 1 . H C13 -0.5027(4) 0.0549(4) 0.6645(4) 0.0344(11) Uani d . 1 . C H13A -0.5672(4) 0.0198(4) 0.6970(4) 0.047(15) Uiso calc R 1 . H C14 -0.3901(5) 0.0414(4) 0.7130(4) 0.0361(11) Uani d . 1 . C H14A -0.3773(5) -0.0033(4) 0.7788(4) 0.044(14) Uiso calc R 1 . H C15 -0.2955(4) 0.0925(3) 0.6668(4) 0.0269(9) Uani d . 1 . C H15A -0.2181(4) 0.0829(3) 0.7008(4) 0.021(11) Uiso calc R 1 . H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Pd Pd -0.9988 1.0072 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag P Pd S 87.74(5) y P Pd Cl1 89.04(5) y S Pd Cl1 176.61(4) y P Pd Cl2 177.64(4) y S Pd Cl2 90.01(5) y Cl1 Pd Cl2 93.21(5) y C3 S C1 100.4(2) ? C3 S Pd 108.0(2) ? C1 S Pd 105.0(2) ? C10 P C4 108.0(2) ? C10 P C2 103.5(2) ? C4 P C2 107.5(2) ? C10 P Pd 116.72(14) ? C4 P Pd 112.94(15) ? C2 P Pd 107.40(15) ? C2 C1 S 109.0(3) ? C1 C2 P 111.2(3) ? C5 C4 C9 118.3(4) ? C5 C4 P 118.4(4) ? C9 C4 P 123.3(3) ? C4 C5 C6 121.0(5) ? C7 C6 C5 120.0(5) ? C6 C7 C8 119.9(5) ? C9 C8 C7 120.0(5) ? C8 C9 C4 120.8(5) ? C15 C10 C11 119.7(4) ? C15 C10 P 121.6(3) ? C11 C10 P 118.6(3) ? C12 C11 C10 119.3(4) ? C13 C12 C11 120.7(5) ? C14 C13 C12 120.0(4) ? C13 C14 C15 120.6(4) ? C14 C15 C10 119.7(4) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Pd P . 2.2213(13) y Pd S . 2.2764(12) y Pd Cl1 . 2.3115(12) y Pd Cl2 . 2.3719(13) y S C3 . 1.799(5) ? S C1 . 1.838(5) ? P C10 . 1.810(4) ? P C4 . 1.816(4) ? P C2 . 1.836(4) ? C1 C2 . 1.514(6) ? C4 C5 . 1.384(6) ? C4 C9 . 1.392(6) ? C5 C6 . 1.392(7) ? C6 C7 . 1.371(8) ? C7 C8 . 1.386(7) ? C8 C9 . 1.385(7) ? C10 C15 . 1.392(6) ? C10 C11 . 1.405(6) ? C11 C12 . 1.380(6) ? C12 C13 . 1.378(7) ? C13 C14 . 1.376(7) ? C14 C15 . 1.383(6) ?