#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2008302.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008302 loop_ _publ_author_name 'Low, J. N.' 'L\'opez, M. D.' 'Quijano, M. L.' 'S\'anchez, A.' 'Nogueras, M.' _publ_section_title ; (3R,4S,4aR,10aS)-5,10-Diacetyl-3,4,4a,5,6,7,10,10a-octahydro-8-methoxy-6-oxo-2H-pyrano[3,2-g]pteridin-3,4-diyl diacetate ; _journal_issue 3 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 452 _journal_page_last 454 _journal_volume 55 _journal_year 1999 _chemical_formula_moiety 'C18 H22 N4 O9' _chemical_formula_sum 'C18 H22 N4 O9' _chemical_formula_weight 438.40 _chemical_name_systematic ; [(3R,4S,4aR,10aS)-5,10-diacetyl-3,4,4a,5,6,7,10a,10-octahydro-8-methoxy-6-oxo -2H-pyrano[3,2g]pteridin]-3,4-diyl diacetate ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 7.941(3) _cell_length_b 17.481(2) _cell_length_c 14.511(3) _cell_measurement_reflns_used 250 _cell_measurement_temperature 294.0(10) _cell_measurement_theta_max 25.03 _cell_measurement_theta_min 1.82 _cell_volume 2014.4(9) _computing_cell_refinement 'CAD-4-PC and FAST/MADNES' _computing_data_collection ; CAD-4-PC (Enraf-Nonius, 1992) and FAST/MADNES (Pflugrath & Messerschmidt, 1980) ; _computing_data_reduction 'CAD-4-PC, FAST/MADNES and DATRD2 in NRCVAX94 (Gabe et al., 1989)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976) and PLATON (Spek, 1998)' _computing_publication_material 'NRCVAX96, SHELXL97 and PREP8 (Ferguson, 1998)' _computing_structure_refinement 'NRCVAX96 and SHELXL97 (Sheldrick, 1997a)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997b)' _diffrn_ambient_temperature 294.0(10) _diffrn_measured_fraction_theta_full 0.872 _diffrn_measured_fraction_theta_max 0.872 _diffrn_measurement_device ; Enraf-Nonius diffractometer with FAST area-detector ; _diffrn_measurement_method 'MADNES scans (Pflugrath & Messerschmidt, 1980)' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'X-ray tube' _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.098 _diffrn_reflns_av_sigmaI/netI 0.106 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min -19 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 8231 _diffrn_reflns_theta_full 25.03 _diffrn_reflns_theta_max 25.03 _diffrn_reflns_theta_min 1.82 _diffrn_standards_decay_% 'as above' _diffrn_standards_interval_time 'as above' _diffrn_standards_number 'Not applicable - FAST data' _exptl_absorpt_coefficient_mu 0.117 _exptl_absorpt_correction_type none _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.446 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 920 _exptl_crystal_size_max 0.28 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.14 _refine_diff_density_max 0.323 _refine_diff_density_min -0.256 _refine_ls_abs_structure_details 'Flack (1983), 1091 Friedel pairs' _refine_ls_abs_structure_Flack -5.8(14) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.837 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 285 _refine_ls_number_reflns 2893 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.837 _refine_ls_R_factor_all 0.054 _refine_ls_R_factor_gt 0.039 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0249P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.084 _reflns_number_gt 2076 _reflns_number_total 2893 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1253.cif _[local]_cod_data_source_block sp49 _cod_database_code 2008302 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' '-x+1/2, -y, z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 0.3877(3) -0.23334(11) 0.02652(13) 0.0353(6) Uani d . 1 O C2 0.4722(5) -0.26523(19) -0.05212(19) 0.0383(9) Uani d . 1 C C3 0.5162(5) -0.20455(18) -0.12391(19) 0.0362(9) Uani d . 1 C O3 0.4288(3) -0.22348(12) -0.20894(13) 0.0425(6) Uani d . 1 O C31 0.4946(6) -0.1948(2) -0.2878(2) 0.0541(12) Uani d . 1 C C32 0.3909(6) -0.2155(2) -0.3689(2) 0.0717(14) Uani d . 1 C O31 0.6202(4) -0.15702(18) -0.28931(17) 0.0786(9) Uani d . 1 O C4 0.4637(4) -0.12586(18) -0.0923(2) 0.0332(8) Uani d . 1 C O4 0.2831(3) -0.11992(11) -0.08786(13) 0.0332(6) Uani d . 1 O C41 0.2015(5) -0.08406(19) -0.1581(2) 0.0400(9) Uani d . 1 C C42 0.0174(5) -0.0825(2) -0.1424(2) 0.0482(10) Uani d . 1 C O41 0.2736(4) -0.05867(15) -0.22391(16) 0.0648(8) Uani d . 1 O C4a 0.5361(4) -0.11177(18) 0.0036(2) 0.0356(8) Uani d . 1 C N5 0.4865(3) -0.03764(15) 0.04126(16) 0.0346(7) Uani d . 1 N C51 0.5942(5) 0.0226(2) 0.0385(2) 0.0375(9) Uani d . 1 C C52 0.5466(5) 0.09475(19) 0.0877(2) 0.0528(10) Uani d . 1 C O51 0.7297(3) 0.01758(13) -0.00198(15) 0.0484(7) Uani d . 1 O C5a 0.3248(4) -0.03623(19) 0.0826(2) 0.0314(8) Uani d . 1 C C6 0.1960(5) 0.01476(19) 0.0502(2) 0.0339(9) Uani d . 1 C O6 0.2097(3) 0.06279(13) -0.01141(15) 0.0473(7) Uani d . 1 O N7 0.0447(4) 0.00478(15) 0.09610(17) 0.0382(7) Uani d . 1 N C8 0.0241(5) -0.0484(2) 0.1623(2) 0.0367(9) Uani d . 1 C O8 -0.1293(3) -0.04324(14) 0.20101(16) 0.0545(7) Uani d . 1 O C81 -0.1568(5) -0.0888(2) 0.2817(3) 0.0685(13) Uani d . 1 C N9 0.1315(4) -0.09999(15) 0.18517(16) 0.0347(7) Uani d . 1 N C9a 0.2834(4) -0.09349(19) 0.1417(2) 0.0317(8) Uani d . 1 C N10 0.4036(3) -0.15244(15) 0.15317(16) 0.0343(7) Uani d . 1 N C11 0.4355(5) -0.1921(2) 0.2352(2) 0.0429(10) Uani d . 1 C O10 0.5238(4) -0.24793(14) 0.23378(15) 0.0608(8) Uani d . 1 O C12 0.3658(5) -0.1605(2) 0.3231(2) 0.0625(12) Uani d . 1 C C10a 0.4912(5) -0.17860(17) 0.07132(18) 0.0347(8) Uani d . 1 C H2A 0.4005 -0.3036 -0.0802 0.046 Uiso calc R 1 H H2B 0.5748 -0.2903 -0.0319 0.046 Uiso calc R 1 H H3 0.6380 -0.2051 -0.1349 0.043 Uiso calc R 1 H H32A 0.3380 -0.2641 -0.3584 0.108 Uiso calc PR 0.50 H H32B 0.4614 -0.2186 -0.4225 0.108 Uiso calc PR 0.50 H H32C 0.3061 -0.1771 -0.3784 0.108 Uiso calc PR 0.50 H H32D 0.3990 -0.1758 -0.4144 0.108 Uiso calc PR 0.50 H H32E 0.2756 -0.2212 -0.3503 0.108 Uiso calc PR 0.50 H H32F 0.4309 -0.2627 -0.3945 0.108 Uiso calc PR 0.50 H H4 0.5076 -0.0874 -0.1352 0.040 Uiso calc R 1 H H42A -0.0083 -0.1087 -0.0859 0.072 Uiso calc PR 0.50 H H42B -0.0387 -0.1075 -0.1926 0.072 Uiso calc PR 0.50 H H42C -0.0202 -0.0305 -0.1384 0.072 Uiso calc PR 0.50 H H42D -0.0365 -0.0558 -0.1920 0.072 Uiso calc PR 0.50 H H42E -0.0060 -0.0569 -0.0853 0.072 Uiso calc PR 0.50 H H42F -0.0246 -0.1340 -0.1396 0.072 Uiso calc PR 0.50 H H4A 0.6590 -0.1111 -0.0026 0.043 Uiso calc R 1 H H52A 0.4457 0.0863 0.1227 0.079 Uiso calc PR 0.50 H H52B 0.5275 0.1347 0.0435 0.079 Uiso calc PR 0.50 H H52C 0.6361 0.1095 0.1284 0.079 Uiso calc PR 0.50 H H52D 0.6272 0.1340 0.0737 0.079 Uiso calc PR 0.50 H H52E 0.5454 0.0856 0.1529 0.079 Uiso calc PR 0.50 H H52F 0.4368 0.1108 0.0680 0.079 Uiso calc PR 0.50 H H7 -0.0392 0.0336 0.0818 0.046 Uiso calc R 1 H H81a -0.2755 -0.0959 0.2908 0.103 Uiso calc PR 0.50 H H81B -0.1096 -0.0634 0.3344 0.103 Uiso calc PR 0.50 H H81C -0.1036 -0.1377 0.2741 0.103 Uiso calc PR 0.50 H H81D -0.0503 -0.1021 0.3087 0.103 Uiso calc PR 0.50 H H81E -0.2162 -0.1346 0.2651 0.103 Uiso calc PR 0.50 H H81F -0.2222 -0.0603 0.3255 0.103 Uiso calc PR 0.50 H H12A 0.2782 -0.1244 0.3093 0.094 Uiso calc PR 0.50 H H12B 0.4539 -0.1353 0.3567 0.094 Uiso calc PR 0.50 H H12C 0.3206 -0.2014 0.3596 0.094 Uiso calc PR 0.50 H H12D 0.4236 -0.1830 0.3744 0.094 Uiso calc PR 0.50 H H12E 0.2479 -0.1721 0.3270 0.094 Uiso calc PR 0.50 H H12F 0.3812 -0.1060 0.3242 0.094 Uiso calc PR 0.50 H H10A 0.5959 -0.2037 0.0903 0.042 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 0.0354(14) 0.0357(13) 0.0347(12) 0.0025(12) 0.0069(11) -0.0052(11) C2 0.040(2) 0.038(2) 0.0368(17) 0.0075(19) 0.0039(16) -0.0017(18) C3 0.028(2) 0.045(2) 0.0355(18) -0.0011(18) 0.0042(16) -0.0047(18) O3 0.0553(18) 0.0411(14) 0.0312(12) -0.0012(13) 0.0030(11) 0.0000(11) C31 0.080(4) 0.044(3) 0.038(2) 0.006(2) 0.017(2) 0.000(2) C32 0.112(4) 0.062(3) 0.041(2) 0.007(3) -0.009(2) 0.005(2) O31 0.080(2) 0.093(2) 0.0621(18) -0.017(2) 0.0258(17) 0.0067(17) C4 0.029(2) 0.034(2) 0.0361(17) 0.0003(17) 0.0047(16) 0.0003(17) O4 0.0310(15) 0.0373(13) 0.0312(11) 0.0042(12) 0.0024(10) 0.0031(11) C41 0.052(3) 0.035(2) 0.033(2) 0.006(2) -0.0024(18) -0.0027(18) C42 0.045(3) 0.050(3) 0.050(2) 0.011(2) -0.0106(18) 0.0010(19) O41 0.072(2) 0.0744(19) 0.0480(15) 0.0077(17) 0.0063(15) 0.0265(14) C4a 0.026(2) 0.039(2) 0.0419(18) 0.0051(18) 0.0037(15) -0.0033(18) N5 0.0293(18) 0.0355(16) 0.0390(14) -0.0042(15) 0.0033(14) -0.0054(14) C51 0.036(3) 0.045(2) 0.0309(18) -0.002(2) -0.0051(17) 0.0024(18) C52 0.052(3) 0.047(2) 0.059(2) -0.008(2) -0.002(2) -0.011(2) O51 0.0346(17) 0.0562(17) 0.0544(15) -0.0072(14) 0.0099(13) 0.0027(13) C5a 0.025(2) 0.034(2) 0.0355(18) 0.0010(17) 0.0030(15) -0.0046(18) C6 0.036(2) 0.035(2) 0.0311(18) 0.0003(18) 0.0015(17) -0.0061(18) O6 0.0492(17) 0.0481(15) 0.0445(14) 0.0046(14) 0.0020(12) 0.0140(13) N7 0.0292(18) 0.0433(18) 0.0421(15) 0.0035(15) 0.0005(14) 0.0031(15) C8 0.031(2) 0.040(2) 0.0385(19) 0.003(2) 0.0049(17) -0.0084(19) O8 0.0402(17) 0.0572(16) 0.0659(17) 0.0050(15) 0.0204(13) 0.0089(15) C81 0.072(3) 0.056(3) 0.077(3) -0.001(2) 0.040(2) 0.008(2) N9 0.0327(18) 0.0344(17) 0.0371(15) 0.0012(15) 0.0065(14) -0.0015(14) C9a 0.032(2) 0.033(2) 0.0303(17) -0.0012(18) -0.0028(16) -0.0062(17) N10 0.0338(18) 0.0406(17) 0.0284(14) 0.0111(16) 0.0003(12) 0.0009(14) C11 0.048(3) 0.041(2) 0.040(2) -0.001(2) -0.0014(18) -0.0017(19) O10 0.079(2) 0.0548(17) 0.0489(15) 0.0269(17) 0.0017(14) 0.0079(14) C12 0.080(3) 0.070(3) 0.038(2) 0.017(3) -0.001(2) -0.003(2) C10a 0.026(2) 0.040(2) 0.0380(18) 0.0046(17) 0.0013(15) -0.0015(18) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C10a O1 C2 110.8(2) no O1 C2 C3 112.3(2) no O3 C3 C4 109.5(3) no O3 C3 C2 108.2(3) no C4 C3 C2 111.3(2) no C31 O3 C3 116.7(3) no O31 C31 O3 122.8(4) no O31 C31 C32 125.7(4) no O3 C31 C32 111.5(4) no O4 C4 C3 110.8(3) no O4 C4 C4a 108.8(3) no C3 C4 C4a 108.7(3) no C41 O4 C4 118.3(3) no O41 C41 O4 122.7(4) no O41 C41 C42 126.0(3) no O4 C41 C42 111.2(3) no N5 C4a C4 112.5(3) no N5 C4a C10a 111.4(2) no C4 C4a C10a 111.4(3) no C51 N5 C5a 124.7(3) no C51 N5 C4a 120.5(3) no C5a N5 C4a 114.7(3) no O51 C51 N5 120.7(3) no O51 C51 C52 120.6(3) no N5 C51 C52 118.7(3) no C9a C5a N5 118.3(3) no C9a C5a C6 119.5(3) no N5 C5a C6 121.2(3) no O6 C6 N7 120.8(3) no O6 C6 C5a 126.7(3) no N7 C6 C5a 112.5(3) no C8 N7 C6 122.4(3) no N9 C8 O8 122.7(3) no N9 C8 N7 126.0(3) no O8 C8 N7 111.2(3) no C8 O8 C81 116.2(3) no C8 N9 C9a 114.1(3) no C5a C9a N9 124.5(3) no C5a C9a N10 116.6(3) no N9 C9a N10 118.7(3) no C11 N10 C9a 125.6(3) no C11 N10 C10a 117.0(3) no C9a N10 C10a 117.2(2) no O10 C11 N10 119.5(3) no O10 C11 C12 122.0(3) no N10 C11 C12 118.4(3) no O1 C10a N10 108.0(3) no O1 C10a C4a 110.3(2) no N10 C10a C4a 112.8(3) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C10a 1.419(4) no O1 C2 1.437(3) no C2 C3 1.527(4) no C3 O3 1.454(4) no C3 C4 1.509(4) no O3 C31 1.354(4) no C31 O31 1.196(5) no C31 C32 1.481(6) no C4 O4 1.439(4) no C4 C4a 1.526(4) no O4 C41 1.361(4) no C41 O41 1.198(4) no C41 C42 1.480(5) no C4a N5 1.461(4) no C4a C10a 1.568(4) no N5 C51 1.358(4) no N5 C5a 1.417(4) no C51 O51 1.229(4) no C51 C52 1.497(4) no C5a C9a 1.358(4) yes C5a C6 1.436(4) no C6 O6 1.231(3) no C6 N7 1.385(4) no N7 C8 1.347(4) no C8 N9 1.286(4) yes C8 O8 1.344(4) no O8 C81 1.433(4) no N9 C9a 1.366(4) no C9a N10 1.414(4) no N10 C11 1.401(4) no N10 C10a 1.450(4) no C11 O10 1.202(4) no C11 C12 1.496(4) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N7 H7 O51 1_455 0.86 2.219 2.886(4) 134.32 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C10a O1 C2 C3 -60.7(3) no O1 C2 C3 O3 -118.6(3) no O1 C2 C3 C4 1.7(4) no C4 C3 O3 C31 81.5(3) no C2 C3 O3 C31 -157.1(3) no C3 O3 C31 O31 1.6(5) no C3 O3 C31 C32 -177.7(3) no O3 C3 C4 O4 52.3(3) no C2 C3 C4 O4 -67.2(3) no O3 C3 C4 C4a 171.8(2) no C2 C3 C4 C4a 52.3(4) no C3 C4 O4 C41 -100.9(3) no C4a C4 O4 C41 139.7(3) no C4 O4 C41 O41 1.4(5) no C4 O4 C41 C42 -179.6(3) no O4 C4 C4a N5 -57.2(3) no C3 C4 C4a N5 -178.0(3) no O4 C4 C4a C10a 68.8(3) no C3 C4 C4a C10a -52.0(4) no C4 C4a N5 C51 -100.2(3) no C10a C4a N5 C51 133.8(3) no C4 C4a N5 C5a 82.3(3) no C10a C4a N5 C5a -43.7(4) no C5a N5 C51 O51 -177.1(3) no C4a N5 C51 O51 5.7(4) no C5a N5 C51 C52 4.4(4) no C4a N5 C51 C52 -172.8(3) no C51 N5 C5a C9a -130.8(3) no C4a N5 C5a C9a 46.5(4) no C51 N5 C5a C6 61.3(4) no C4a N5 C5a C6 -121.3(3) no C9a C5a C6 O6 -170.5(3) no N5 C5a C6 O6 -2.7(5) no C9a C5a C6 N7 9.1(4) no N5 C5a C6 N7 176.8(3) no O6 C6 N7 C8 178.5(3) no C5a C6 N7 C8 -1.2(4) no C6 N7 C8 N9 -6.9(5) no C6 N7 C8 O8 175.5(3) no N9 C8 O8 C81 11.7(5) no N7 C8 O8 C81 -170.7(3) no O8 C8 N9 C9a -176.8(3) no N7 C8 N9 C9a 5.9(5) yes N5 C5a C9a N9 -178.9(3) no C6 C5a C9a N9 -10.8(5) no N5 C5a C9a N10 -3.3(4) no C6 C5a C9a N10 164.7(2) no C8 N9 C9a C5a 3.1(5) no C8 N9 C9a N10 -172.4(3) no C5a C9a N10 C11 145.2(3) no N9 C9a N10 C11 -39.0(4) no C5a C9a N10 C10a -40.4(4) no N9 C9a N10 C10a 135.4(3) no C9a N10 C11 O10 169.9(3) no C10a N10 C11 O10 -4.6(5) no C9a N10 C11 C12 -13.6(5) no C10a N10 C11 C12 171.9(3) no C2 O1 C10a N10 -176.3(2) no C2 O1 C10a C4a 60.0(3) no C11 N10 C10a O1 91.3(3) no C9a N10 C10a O1 -83.6(3) no C11 N10 C10a C4a -146.4(3) no C9a N10 C10a C4a 38.6(4) no N5 C4a C10a O1 123.9(3) no C4 C4a C10a O1 -2.7(4) yes N5 C4a C10a N10 2.9(4) yes C4 C4a C10a N10 -123.6(3) no