#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/83/2008361.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008361 loop_ _publ_author_name 'Ben Amor, Fatma' 'Jouini, Tahar' _publ_section_title ; Complexe de cuivre(II) diamino-1,2-(cyclohexane diac\'etatodiac\'etique) trihydrate ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 499 _journal_page_last 501 _journal_paper_doi 10.1107/S0108270198011561 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[Cu (C14 H20 N2 O8)] , 3H2 O' _chemical_formula_moiety 'C14 H26 Cu N2 O11' _chemical_formula_structural Cu[{N(CH2COO)(CH2COOH)}2C6H10].3H2O _chemical_formula_sum 'C14 H26 Cu N2 O11' _chemical_formula_weight 461.91 _chemical_name_systematic ; Complexe de cuivre(II) diamino-1,2(cyclohexane diac\'etatodiac\'etique) trihydrate ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.494(4) _cell_length_b 13.110(4) _cell_length_c 13.485(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 13.58 _cell_measurement_theta_min 11.81 _cell_volume 1855.2(11) _computing_cell_refinement 'CAD-4 EXPRESS' _computing_data_collection ;CAD-4 EXPRESS (Duisenberg, 1992; Macicek & Yordanov, 1992; Enraf-Nonius, 1994) ; _computing_data_reduction 'MolEN (Fair, 1990)' _computing_molecular_graphics 'ZORTEP (Zsolnai, 1994)' _computing_publication_material SHELXL93 _computing_structure_refinement SHELXL93 _computing_structure_solution SHELXS86 _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'CAD-4, Enraf-Nonius' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71069 _diffrn_reflns_av_R_equivalents 0.042 _diffrn_reflns_av_sigmaI/netI 0.031 _diffrn_reflns_limit_h_max 3 _diffrn_reflns_limit_h_min -12 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 2591 _diffrn_reflns_theta_max 26.01 _diffrn_reflns_theta_min 2.46 _diffrn_standards_decay_% 3.3 _diffrn_standards_interval_time 120 _diffrn_standards_number 1 _exptl_absorpt_coefficient_mu 1.241 _exptl_absorpt_correction_T_max 0.733 _exptl_absorpt_correction_T_min 0.729 _exptl_absorpt_correction_type 'correction empirique par \y scans (North et al., 1968)' _exptl_crystal_colour bleue _exptl_crystal_density_diffrn 1.654 _exptl_crystal_density_method 'pas mesur\'ee' _exptl_crystal_description plaquette _exptl_crystal_F_000 964 _exptl_crystal_size_max 0.58 _exptl_crystal_size_mid 0.29 _exptl_crystal_size_min 0.25 _refine_diff_density_max 0.489 _refine_diff_density_min -0.497 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack -0.02(2) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.093 _refine_ls_goodness_of_fit_obs 1.061 _refine_ls_hydrogen_treatment 'refall except HO4 HO7 H1W1 H2W1 constrained' _refine_ls_matrix_type full _refine_ls_number_parameters 333 _refine_ls_number_reflns 2519 _refine_ls_number_restraints 3 _refine_ls_restrained_S_all 1.093 _refine_ls_restrained_S_obs 1.061 _refine_ls_R_factor_all 0.048 _refine_ls_R_factor_obs 0.037 _refine_ls_shift/esd_max -0.001 _refine_ls_shift/esd_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0632P)^2^+0.9119P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.100 _refine_ls_wR_factor_obs 0.090 _reflns_number_observed 2181 _reflns_number_total 2519 _reflns_observed_criterion I>2\s(I) _cod_data_source_file gs1006.cif _cod_data_source_block gs1006 _cod_depositor_comments ; Marking attached hydrogen atoms. Antanas Vaitkus, 2017-08-07 The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0632P)^2^+0.9119P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0632P)^2^+0.9119P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_database_code 2008361 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0289(3) 0.0212(2) 0.0264(2) -0.0015(2) 0.0010(2) 0.0007(2) O1 0.038(2) 0.0297(15) 0.043(2) -0.004(2) 0.000(2) 0.0100(13) O2 0.031(2) 0.0220(14) 0.038(2) 0.000(2) -0.001(2) -0.0035(12) O3 0.030(2) 0.052(2) 0.031(2) 0.001(2) 0.004(2) -0.005(2) O4 0.034(2) 0.083(3) 0.054(3) -0.007(2) 0.014(2) -0.028(2) O5 0.057(3) 0.062(3) 0.088(3) -0.003(2) -0.020(3) 0.045(3) O6 0.058(3) 0.044(2) 0.038(2) -0.008(2) 0.000(2) -0.017(2) O7 0.029(2) 0.025(2) 0.072(3) 0.003(2) -0.003(2) -0.001(2) O8 0.034(2) 0.029(2) 0.056(2) 0.004(2) -0.006(2) -0.011(2) N1 0.025(2) 0.031(2) 0.028(2) -0.002(2) -0.001(2) 0.0008(15) N2 0.026(2) 0.0210(15) 0.026(2) -0.003(2) 0.002(2) 0.0000(12) C1 0.026(3) 0.022(2) 0.036(2) 0.000(2) 0.001(2) -0.001(2) C2 0.035(3) 0.035(3) 0.043(3) -0.005(3) -0.005(3) -0.009(2) C3 0.034(3) 0.030(3) 0.070(4) -0.010(3) -0.004(3) -0.010(3) C4 0.038(3) 0.034(3) 0.064(4) -0.013(3) 0.010(3) 0.005(3) C5 0.034(3) 0.031(3) 0.049(3) -0.007(2) 0.006(3) 0.006(2) C6 0.024(2) 0.023(2) 0.033(2) -0.002(2) 0.000(2) -0.001(2) C7 0.029(3) 0.043(3) 0.028(2) 0.001(2) -0.003(2) 0.001(2) C8 0.034(3) 0.046(3) 0.038(3) 0.001(3) 0.008(3) 0.013(2) C9 0.037(3) 0.044(3) 0.026(2) -0.007(3) 0.009(3) -0.007(2) C10 0.033(3) 0.038(3) 0.041(3) 0.004(2) 0.006(2) -0.002(2) C11 0.035(3) 0.031(2) 0.027(2) -0.007(2) -0.003(3) 0.000(2) C12 0.022(2) 0.036(2) 0.032(2) 0.006(2) -0.001(2) -0.009(2) C13 0.036(3) 0.030(2) 0.034(3) 0.001(2) -0.001(2) 0.003(2) C14 0.029(3) 0.029(2) 0.034(2) 0.004(2) -0.002(2) 0.003(2) OW1 0.041(2) 0.115(4) 0.054(3) 0.006(3) -0.005(3) -0.005(3) OW3 0.235(12) 0.106(5) 0.117(5) 0.033(7) -0.023(7) 0.037(5) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol _atom_site_attached_hydrogens Cu1 0.02537(6) 0.73840(3) 0.88383(4) 0.0255(2) Uani d . 1 . Cu 0 O1 -0.0215(4) 0.8455(2) 0.7918(2) 0.0369(8) Uani d . 1 . O 0 O2 0.0450(4) 0.8325(2) 0.9929(2) 0.0304(8) Uani d . 1 . O 0 O3 0.2024(4) 0.6827(3) 0.8024(3) 0.0376(8) Uani d . 1 . O 0 O4 0.2405(4) 0.6353(4) 0.6462(3) 0.0570(12) Uani d . 1 . O 0 HO4 0.309(2) 0.664(4) 0.655(2) 0.050 Uiso calc R 1 . H 0 O5 -0.1754(5) 0.8798(4) 0.6839(4) 0.0693(15) Uani d . 1 . O 0 O6 0.0401(5) 0.8384(3) 1.1557(3) 0.0465(10) Uani d . 1 . O 0 O7 0.3373(4) 0.5428(3) 1.0034(3) 0.0420(9) Uani d D 1 . O 0 O8 0.2529(4) 0.6948(3) 1.0378(3) 0.0397(9) Uani d . 1 . O 0 N1 -0.0556(4) 0.6444(3) 0.7823(3) 0.0278(9) Uani d . 1 . N 0 N2 0.0078(4) 0.6256(2) 0.9857(2) 0.0244(8) Uani d . 1 . N 0 C1 -0.0933(5) 0.5495(3) 0.8364(4) 0.0280(10) Uani d . 1 . C 0 C2 -0.2097(6) 0.4954(4) 0.7934(4) 0.0380(10) Uani d . 1 . C 0 C3 -0.2444(6) 0.4014(4) 0.8527(5) 0.0450(10) Uani d . 1 . C 0 C4 -0.2682(6) 0.4287(5) 0.9602(5) 0.0450(10) Uani d . 1 . C 0 C5 -0.1481(6) 0.4778(4) 1.0049(4) 0.0380(10) Uani d . 1 . C 0 C6 -0.1106(5) 0.5727(3) 0.9477(3) 0.0260(10) Uani d . 1 . C 0 C7 -0.1627(5) 0.7095(4) 0.7491(4) 0.0340(10) Uani d . 1 . C 0 C8 -0.1174(6) 0.8210(4) 0.7394(4) 0.0400(10) Uani d . 1 . C 0 C9 0.0306(6) 0.6222(4) 0.6999(4) 0.0360(10) Uani d . 1 . C 0 C10 0.1676(5) 0.6491(4) 0.7224(4) 0.0370(10) Uani d . 1 . C 0 C11 -0.0179(6) 0.6806(4) 1.0804(4) 0.0310(10) Uani d . 1 . C 0 C12 0.0296(5) 0.7911(3) 1.0775(3) 0.0300(10) Uani d . 1 . C 0 C13 0.1160(5) 0.5543(4) 0.9963(4) 0.0330(10) Uani d . 1 . C 0 C14 0.2409(5) 0.6062(4) 1.0146(3) 0.0300(10) Uani d . 1 . C 0 OW1 -0.0291(5) 0.8181(5) 1.3425(4) 0.0700(10) Uani d D 1 . O 0 OW2 -0.4299(11) 0.9568(7) 0.7151(7) 0.153(3) Uiso d . 1 . O 2 OW3 0.1074(11) 0.6827(6) 1.4457(6) 0.153(4) Uani d . 1 . O 2 HO7 0.399(7) 0.573(5) 1.014(5) 0.07(3) Uiso d D 1 . H 0 H11 -0.026(5) 0.504(3) 0.829(3) 0.025(12) Uiso d . 1 . H 0 H12 -0.269(7) 0.551(5) 0.785(5) 0.053(18) Uiso d . 1 . H 0 H22 -0.194(5) 0.483(4) 0.728(4) 0.024(13) Uiso d . 1 . H 0 H13 -0.314(5) 0.375(4) 0.828(3) 0.019(12) Uiso d . 1 . H 0 H23 -0.177(5) 0.353(4) 0.854(3) 0.023(12) Uiso d . 1 . H 0 H14 -0.335(5) 0.477(3) 0.964(3) 0.013(11) Uiso d . 1 . H 0 H24 -0.284(6) 0.371(5) 0.991(4) 0.043(16) Uiso d . 1 . H 0 H15 -0.153(7) 0.495(5) 1.080(5) 0.058(19) Uiso d . 1 . H 0 H25 -0.081(6) 0.433(4) 1.004(4) 0.036(15) Uiso d . 1 . H 0 H16 -0.175(6) 0.615(4) 0.955(4) 0.035(15) Uiso d . 1 . H 0 H17 -0.227(4) 0.707(3) 0.804(3) 0.011(10) Uiso d . 1 . H 0 H27 -0.190(7) 0.686(5) 0.683(5) 0.056(19) Uiso d . 1 . H 0 H19 0.043(6) 0.552(4) 0.682(3) 0.032(13) Uiso d . 1 . H 0 H29 0.010(7) 0.651(4) 0.650(4) 0.048(18) Uiso d . 1 . H 0 H111 0.028(7) 0.653(4) 1.123(4) 0.044(16) Uiso d . 1 . H 0 H211 -0.114(7) 0.687(4) 1.084(4) 0.042(16) Uiso d . 1 . H 0 H113 0.103(5) 0.509(4) 1.052(4) 0.027(13) Uiso d . 1 . H 0 H213 0.130(7) 0.523(5) 0.941(5) 0.06(2) Uiso d . 1 . H 0 H1W1 0.016(10) 0.777(7) 1.380(7) 0.14(5) Uiso d D 1 . H 0 H2W1 -0.005(13) 0.811(9) 1.273(6) 0.15(4) Uiso d D 1 . H 0 loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source Cu Cu 0.3201 1.2651 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O2 Cu1 O1 93.00(10) y O2 Cu1 N2 87.70(10) y O1 Cu1 N2 160.0(2) y O2 Cu1 N1 161.3(2) y O1 Cu1 N1 84.3(2) y N2 Cu1 N1 88.60(10) y O2 Cu1 O3 119.0(2) y O1 Cu1 O3 97.5(2) y N2 Cu1 O3 99.60(10) y N1 Cu1 O3 79.70(10) y C8 O1 Cu1 112.0(3) y C12 O2 Cu1 113.3(3) y C10 O3 Cu1 107.3(3) y C10 O4 HO4 109.5(3) n C14 O7 HO7 107(5) n C9 N1 C7 110.7(4) y C9 N1 C1 111.6(4) y C7 N1 C1 115.2(4) y C9 N1 Cu1 112.0(3) y C7 N1 Cu1 99.9(3) y C1 N1 Cu1 106.7(3) y C13 N2 C11 111.3(4) y C13 N2 C6 111.9(3) y C11 N2 C6 111.4(4) y C13 N2 Cu1 117.2(3) y C11 N2 Cu1 104.1(3) y C6 N2 Cu1 100.3(3) y N1 C1 C2 114.4(4) y N1 C1 C6 110.0(4) y C2 C1 C6 111.5(4) y N1 C1 H11 106.(3) n C2 C1 H11 106.(3) n C6 C1 H11 108.(3) n C3 C2 C1 111.7(5) y C3 C2 H12 121.(4) n C1 C2 H12 102.(4) n C3 C2 H22 114.(3) n C1 C2 H22 108.(4) n H12 C2 H22 98.(5) n C4 C3 C2 110.6(5) y C4 C3 H13 109.(3) n C2 C3 H13 109.(3) n C4 C3 H23 106.(3) n C2 C3 H23 112.(3) n H13 C3 H23 112.(4) n C3 C4 C5 109.8(5) y C3 C4 H14 109.(3) n C5 C4 H14 108.(3) n C3 C4 H24 107.(4) n C5 C4 H24 109.(4) n H14 C4 H24 114.(5) n C6 C5 C4 110.8(5) y C6 C5 H15 109.(4) n C4 C5 H15 116.(4) n C6 C5 H25 109.(4) n C4 C5 H25 111.(4) n H15 C5 H25 101.(5) n N2 C6 C5 114.6(4) y N2 C6 C1 108.9(4) y C5 C6 C1 111.4(4) y N2 C6 H16 108.(4) n C5 C6 H16 105.(4) n C1 C6 H16 109.(4) n N1 C7 C8 109.7(4) y N1 C7 H17 106.(2) n C8 C7 H17 108.(2) n N1 C7 H27 109.(4) n C8 C7 H27 108.(4) n H17 C7 H27 117.(5) n O5 C8 O1 124.7(5) y O5 C8 C7 119.4(5) y O1 C8 C7 115.8(5) y N1 C9 C10 112.9(4) y N1 C9 H19 118.(3) n C10 C9 H19 98.(4) n N1 C9 H29 112.(5) n C10 C9 H29 108.(5) n H19 C9 H29 106.(5) n O3 C10 O4 125.1(5) y O3 C10 C9 123.2(5) y O4 C10 C9 111.7(4) y N2 C11 C12 112.1(4) y N2 C11 H111 106.(4) n C12 C11 H111 104.(4) n N2 C11 H211 105.(3) n C12 C11 H211 104.(3) n H111 C11 H211 126.(5) n O6 C12 O2 122.8(4) y O6 C12 C11 119.0(4) y O2 C12 C11 117.9(4) y N2 C13 C14 113.6(4) y N2 C13 H113 111.(3) n C14 C13 H113 106.(3) n N2 C13 H213 110.(5) n C14 C13 H213 102.(5) n H113 C13 H213 114.(5) n O8 C14 O7 123.8(5) y O8 C14 C13 124.8(5) y O7 C14 C13 111.4(4) y H1W1 OW1 H2W1 111.(10) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O2 . 1.930(3) y Cu1 O1 . 1.937(3) y Cu1 N2 . 2.027(3) y Cu1 N1 . 2.028(4) y Cu1 O3 . 2.279(4) y O1 C8 . 1.271(7) y O2 C12 . 1.275(5) y O3 C10 . 1.220(6) y O4 C10 . 1.294(7) y O4 HO4 . 0.82 y O5 C8 . 1.235(7) y O6 C12 . 1.229(5) y O7 C14 . 1.318(7) y O7 HO7 . 0.77(6) y O8 C14 . 1.209(6) y N1 C9 . 1.462(7) y N1 C7 . 1.481(7) y N1 C1 . 1.496(6) y N2 C13 . 1.479(6) y N2 C11 . 1.491(6) y N2 C6 . 1.513(6) y C1 C2 . 1.527(7) y C1 C6 . 1.542(7) y C1 H11 . 0.93(5) n C2 C3 . 1.514(8) y C2 H12 . 0.97(7) n C2 H22 . 0.91(5) n C3 C4 . 1.513(9) y C3 H13 . 0.87(5) n C3 H23 . 0.95(5) n C4 C5 . 1.539(9) y C4 H14 . 0.94(5) n C4 H24 . 0.88(6) n C5 C6 . 1.516(7) y C5 H15 . 1.03(6) n C5 H25 . 0.92(6) n C6 H16 . 0.88(6) n C7 C8 . 1.543(7) y C7 H17 . 1.00(5) n C7 H27 . 0.98(6) n C9 C10 . 1.511(9) y C9 H19 . 0.96(5) n C9 H29 . 0.80(6) n C11 C12 . 1.531(6) y C11 H111 . 0.83(6) n C11 H211 . 1.02(7) n C13 C14 . 1.498(7) y C13 H113 . 0.97(5) n C13 H213 . 0.87(7) n OW1 H1W1 . 0.88(8) n OW1 H2W1 . 0.97(7) n loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139056518