#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/83/2008391.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008391 loop_ _publ_author_name 'Nakasa, Kazuyuki' 'Nakagawa, Hiroo' 'Kani, Yoshiyuki' 'Tsuchimoto, Masanobu' 'Ohba, Shigeru' _publ_section_title ; Copper(II) 2-thiopheneglyoxylate adducts with pyridine derivatives ; _journal_issue 4 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 513 _journal_page_last 517 _journal_paper_doi 10.1107/S0108270198016424 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[Cu (C6 H3 O3 S)2 (C5 H5 N)2]' _chemical_formula_moiety 'C22 H16 Cu N2 O6 S2' _chemical_formula_structural 'Cu (C4 H3 S C O C O2)2 (C5 H5 N)2' _chemical_formula_sum 'C22 H16 Cu N2 O6 S2' _chemical_formula_weight 532.04 _chemical_name_systematic ; Bis(pyridine)-bis(2-thiopheneglyoxylato-O^1^,O^2^)copper(II) ; _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _atom_type_scat_source IntTabIV _cell_angle_alpha 90. _cell_angle_beta 102.020(10) _cell_angle_gamma 90. _cell_formula_units_Z 4 _cell_length_a 13.150(2) _cell_length_b 11.545(2) _cell_length_c 14.565(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 297 _cell_measurement_theta_max 15.0 _cell_measurement_theta_min 14.6 _cell_volume 2162.7(6) _computing_cell_refinement 'AFC/MSC Diffractometer Control System' _computing_data_collection 'AFC/MSC Diffractometer Control System (Rigaku Corporation, 1993)' _computing_data_reduction 'local programs' _computing_molecular_graphics CRYSTAN-GM _computing_publication_material CRYSTAN-GM _computing_structure_refinement CRYSTAN-GM _computing_structure_solution 'CRYSTAN-GM (Edwards et al., 1996)' _diffrn_measurement_device_type 'Rigaku AFC-5' _diffrn_measurement_method \q-2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.017 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 19 _diffrn_reflns_limit_l_min -19 _diffrn_reflns_number 2594 _diffrn_reflns_theta_max 27.5 _diffrn_standards_decay_% 0 _diffrn_standards_interval_count 100 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.247 _exptl_absorpt_correction_type none _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.634 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_size_max 0.30 _exptl_crystal_size_mid 0.25 _exptl_crystal_size_min 0.20 _refine_diff_density_max 0.32 _refine_diff_density_min -0.47 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_obs 1.401 _refine_ls_hydrogen_treatment 'H atoms riding' _refine_ls_number_parameters 151 _refine_ls_number_reflns 1932 _refine_ls_R_factor_obs 0.039 _refine_ls_shift/esd_max 0.02 _refine_ls_shift/esd_mean 0.0044 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/[\s^2^(F) + 0.000225F^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_obs 0.040 _reflns_number_observed 1932 _reflns_number_total 2489 _reflns_threshold_expression '|F~o~| > 3\s(|F~o~|)' _cod_data_source_file oa1077.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_atom_site_thermal_displace_type' tag value 'Uij' was replaced with 'Uani' value 17 times. Automatic conversion script Id: cif_fix_values 1646 2011-03-28 12:23:43Z adriana The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2008391 loop_ _symmetry_equiv_pos_as_xyz +x,+y,+z -x,+y,1/2-z -x,-y,-z +x,-y,1/2+z 1/2+x,1/2+y,+z 1/2-x,1/2+y,1/2-z 1/2-x,1/2-y,-z 1/2+x,1/2-y,1/2+z loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cu1 0.0377(2) 0.0293(2) 0.0383(3) 0.0019(2) 0.0090(2) -.0020(2) S2 0.0588(5) 0.0421(5) 0.0574(5) 0.0021(4) 0.0237(4) -.0110(4) O3 0.0460(10) 0.0320(10) 0.0420(10) 0.0060(10) 0.0130(10) 0.0020(10) O4 0.116(2) 0.0340(10) 0.077(2) 0.0170(10) 0.055(2) 0.0020(10) O5 0.0680(10) 0.0320(10) 0.0470(10) 0.0080(10) 0.0210(10) -0.0020(10) N6 0.0400(10) 0.0340(10) 0.0370(10) 0.0000(10) 0.0090(10) -0.0020(10) C7 0.0370(10) 0.0320(10) 0.051(2) 0.0010(10) 0.0130(10) -0.0010(10) C8 0.0340(10) 0.0320(10) 0.045(2) -0.0020(10) 0.0090(10) -0.0030(10) C9 0.0340(10) 0.0360(10) 0.0430(10) -0.0030(10) 0.0100(10) -0.0060(10) C10 0.064(2) 0.065(2) 0.042(2) -0.0030(10) 0.0160(10) 0.0000(10) C11 0.087(2) 0.059(2) 0.043(2) -0.008(2) 0.016(2) -0.001(2) C12 0.069(2) 0.060(2) 0.051(2) -0.010(2) 0.020(2) -0.016(2) C13 0.048(2) 0.039(2) 0.045(2) 0.0040(10) 0.0110(10) -0.0010(10) C14 0.045(2) 0.055(2) 0.052(2) 0.0100(10) 0.0080(10) 0.0010(10) C15 0.037(2) 0.066(2) 0.058(2) -0.004(2) 0.0090(10) -0.008(2) C16 0.046(2) 0.046(2) 0.064(2) -0.0060(10) 0.012(2) -0.003(2) C17 0.045(2) 0.038(2) 0.054(2) 0.0010(10) 0.0100(10) -0.0010(10) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_occupancy Cu1 0.25 0.25 0.5 0.03650(10) Uani 1.000 S2 0.12628(7) 0.42807(7) 0.82542(6) 0.0561(3) Uani 0.938 O3 0.1869(2) 0.3923(2) 0.53410(10) 0.0410(6) Uani 1.000 O4 0.1360(2) 0.4964(2) 0.6437(2) 0.0780(10) Uani 1.000 O5 0.1937(2) 0.2028(2) 0.64380(10) 0.0510(8) Uani 1.000 N6 0.1077(2) 0.1945(2) 0.4283(2) 0.0386(8) Uani 1.000 C7 0.1628(2) 0.4060(2) 0.6131(2) 0.0412(9) Uani 1.000 C8 0.1691(2) 0.2950(2) 0.6748(2) 0.0385(9) Uani 1.000 C9 0.1476(2) 0.3026(2) 0.7689(2) 0.0398(9) Uani 1.000 C10 0.1498(2) 0.2016(3) 0.8271(2) 0.0580(10) Uani 1.167 C11 0.1318(3) 0.2400(3) 0.9169(2) 0.0650(10) Uani 1.000 C12 0.1189(3) 0.3558(3) 0.9236(2) 0.0640(10) Uani 1.000 C13 0.0323(2) 0.2693(3) 0.3887(2) 0.0450(10) Uani 1.000 C14 -0.0647(2) 0.2325(3) 0.3423(2) 0.0520(10) Uani 1.000 C15 -0.0858(2) 0.1165(3) 0.3368(2) 0.0560(10) Uani 1.000 C16 -0.0100(2) 0.0391(3) 0.3774(2) 0.0540(10) Uani 1.000 C17 0.0859(2) 0.0815(3) 0.4226(2) 0.0470(10) Uani 1.000 H10 0.17276 0.12681 0.81102 0.10 Uiso 0.900 H11 0.12991 0.18147 0.96332 0.10 Uiso 1.000 H12 0.11989 0.39823 0.98051 0.10 Uiso 1.000 H13 0.05490 0.34845 0.39490 0.10 Uiso 1.000 H14 -0.11383 0.29257 0.31913 0.10 Uiso 1.000 H15 -0.15348 0.08578 0.31080 0.10 Uiso 1.000 H16 -0.02153 -0.04302 0.37757 0.10 Uiso 1.000 H17 0.13972 0.02908 0.45168 0.10 Uiso 1.000 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O3 Cu1 O3 . 7_556 180.0 no O3 Cu1 O5 . . 75.30(10) yes O3 Cu1 O5 . 7_556 104.70(10) no O3 Cu1 N6 . . 90.10(10) yes O3 Cu1 N6 . 7_556 89.90(10) no O3 Cu1 O5 7_556 . 104.70(10) no O3 Cu1 O5 7_556 7_556 75.30(10) no O3 Cu1 N6 7_556 . 89.90(10) no O3 Cu1 N6 7_556 7_556 90.10(10) no O5 Cu1 O5 . 7_556 180.0 no O5 Cu1 N6 . . 87.70(10) yes O5 Cu1 N6 . 7_556 92.30(10) no O5 Cu1 N6 7_556 . 92.30(10) no O5 Cu1 N6 7_556 7_556 87.70(10) no N6 Cu1 N6 . 7_556 180.0 no C9 S2 C12 . . 91.9(2) no Cu1 O3 C7 . . 122.5(2) yes Cu1 O3 C7 7_556 . 122.5(2) no Cu1 O5 C8 . . 106.0(2) yes Cu1 O5 C8 7_556 . 106.0(2) no Cu1 N6 C13 . . 122.0(2) no Cu1 N6 C17 . . 120.0(2) no Cu1 N6 C13 7_556 . 122.0(2) no Cu1 N6 C17 7_556 . 120.0(2) no C13 N6 C17 . . 118.0(3) no O3 C7 O4 . . 126.0(3) no O3 C7 C8 . . 115.4(3) no O4 C7 C8 . . 118.6(3) no O5 C8 C7 . . 119.1(3) no O5 C8 C9 . . 121.1(3) no C7 C8 C9 . . 119.8(3) no S2 C9 C8 . . 125.7(3) no S2 C9 C10 . . 112.7(3) no C8 C9 C10 . . 121.5(3) no C9 C10 C11 . . 107.4(3) no C10 C11 C12 . . 114.5(3) no S2 C12 C11 . . 113.6(3) no N6 C13 C14 . . 122.3(3) no C13 C14 C15 . . 119.0(3) no C14 C15 C16 . . 119.4(3) no C15 C16 C17 . . 118.7(3) no N6 C17 C16 . . 122.5(3) no C9 C10 H10 . . 123.6 no C11 C10 H10 . . 128.0 no C10 C11 H11 . . 117.0 no C12 C11 H11 . . 128.5 no S2 C12 H12 . . 119.3 no C11 C12 H12 . . 125.9 no N6 C13 H13 . . 112.5 no C14 C13 H13 . . 125.1 no C13 C14 H14 . . 115.8 no C15 C14 H14 . . 125.1 no C14 C15 H15 . . 123.0 no C16 C15 H15 . . 117.3 no C15 C16 H16 . . 122.8 no C17 C16 H16 . . 118.4 no N6 C17 H17 . . 117.4 no C16 C17 H17 . . 120.1 no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cu1 O3 . . 1.951(2) yes Cu1 O3 . 7_556 1.951(2) no Cu1 O5 . . 2.424(3) yes Cu1 O5 . 7_556 2.424(3) no Cu1 N6 . . 2.047(3) yes Cu1 N6 . 7_556 2.047(3) no S2 C9 . . 1.718(3) no S2 C12 . . 1.676(4) no O3 C7 . . 1.264(4) yes O4 C7 . . 1.216(4) yes O5 C8 . . 1.226(4) yes N6 C13 . . 1.350(4) no N6 C17 . . 1.335(4) no C7 C8 . . 1.558(4) no C8 C9 . . 1.457(4) no C9 C10 . . 1.438(4) no C10 C11 . . 1.446(5) no C11 C12 . . 1.354(6) no C13 C14 . . 1.380(5) no C14 C15 . . 1.366(5) no C15 C16 . . 1.376(5) no C16 C17 . . 1.385(5) no C10 H10 . . 0.960 no C11 H11 . . 0.959 no C12 H12 . . 0.960 no C13 H13 . . 0.960 no C14 H14 . . 0.960 no C15 H15 . . 0.960 no C16 H16 . . 0.960 no C17 H17 . . 0.960 no