#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/85/2008503.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008503 loop_ _publ_author_name 'Benakli, K.' 'Crozet, M. P.' 'Vanelle, P.' 'Giorgi, M. ' _publ_section_title (E)-2-[2-(4-Chloromethylphenyl)vinyl]-1-methyl-5-nitro-1H-imidazole _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first IUC9900041 _journal_paper_doi 10.1107/S0108270199099424 _journal_volume 55 _journal_year 1999 _chemical_formula_moiety 'C13 H12 Cl N3 O2' _chemical_formula_sum 'C13 H12 Cl N3 O2' _chemical_formula_weight 277.71 _space_group_IT_number 15 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-C 2yc' _symmetry_space_group_name_H-M 'C 1 2/c 1' _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 101.14(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 20.620(6) _cell_length_b 13.147(4) _cell_length_c 9.601(5) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 14 _cell_measurement_theta_min 9 _cell_volume 2553.7(17) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'BEGIN in SDP (Frenz et al., 1985)' _computing_publication_material 'manual edit of SHELXL CIF' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'direct methods (MULTAN80; Main et al., 1980)' _diffrn_ambient_temperature 294(2) _diffrn_measured_fraction_theta_full 0.997 _diffrn_measured_fraction_theta_max 0.997 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \q/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.043 _diffrn_reflns_av_sigmaI/netI 0.035 _diffrn_reflns_limit_h_max 24 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 11 _diffrn_reflns_limit_l_min -11 _diffrn_reflns_number 2423 _diffrn_reflns_theta_full 24.99 _diffrn_reflns_theta_max 25.0 _diffrn_reflns_theta_min 1.9 _diffrn_standards_decay_% 3.39 _diffrn_standards_interval_time 60 _diffrn_standards_number 2 _exptl_absorpt_coefficient_mu 0.300 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.445 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Plate _exptl_crystal_F_000 1152 _exptl_crystal_size_max 0.5 _exptl_crystal_size_mid 0.3 _exptl_crystal_size_min 0.2 _refine_diff_density_max 0.214 _refine_diff_density_min -0.303 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.063 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 173 _refine_ls_number_reflns 2245 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.063 _refine_ls_R_factor_all 0.084 _refine_ls_R_factor_gt 0.051 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0772P)^2^+1.3985P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.148 _reflns_number_gt 1537 _reflns_number_total 2245 _reflns_threshold_expression I>2\s(I) _cod_data_source_file qb0090.cif _cod_data_source_block QB0090 _cod_original_sg_symbol_H-M 'C 2/c' _cod_database_code 2008503 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x, -y, z+1/2' 'x+1/2, y+1/2, z' 'x+1/2, -y+1/2, z+1/2' '-x, -y, -z' '-x, y, -z-1/2' '-x+1/2, -y+1/2, -z' '-x+1/2, y+1/2, -z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl .55398(5) .08765(7) .12436(9) .0735(3) Uani d . 1 . . CL O1 .69823(16) 1.05935(18) -.1053(3) .0914(9) Uani d . 1 . . O O2 .74723(13) .97077(18) -.2434(3) .0722(7) Uani d . 1 . . O N1 .69165(11) .79165(17) -.1530(2) .0423(6) Uani d . 1 . . N N2 .63581(14) .7861(2) .0235(3) .0558(7) Uani d . 1 . . N N3 .71280(13) .9775(2) -.1533(3) .0586(7) Uani d . 1 . . N C1 .53842(18) .1501(2) -.0434(3) .0612(9) Uani d . 1 . . C H1A .5610 .1140 -.1083 .073 Uiso calc R 1 . . H H1B .4914 .1483 -.0825 .073 Uiso calc R 1 . . H C2 .56122(15) .2580(2) -.0319(3) .0487(7) Uani d . 1 . . C C3 .54205(15) .3242(2) .0648(3) .0535(8) Uani d . 1 . . C H3 .5153 .3006 .1255 .064 Uiso calc R 1 . . H C4 .56161(15) .4230(2) .0724(3) .0521(8) Uani d . 1 . . C H4 .5478 .4655 .1385 .062 Uiso calc R 1 . . H C5 .60208(14) .4631(2) -.0163(3) .0450(7) Uani d . 1 . . C C6 .62214(15) .3958(2) -.1111(3) .0532(8) Uani d . 1 . . C H6 .6496 .4189 -.1707 .064 Uiso calc R 1 . . H C7 .60212(16) .2944(2) -.1189(3) .0556(8) Uani d . 1 . . C H7 .6164 .2509 -.1832 .067 Uiso calc R 1 . . H C8 .61760(14) .5707(2) -.0088(3) .0479(7) Uani d . 1 . . C H8 .6016 .6074 .0602 .057 Uiso calc R 1 . . H C9 .65175(14) .6232(2) -.0882(3) .0470(7) Uani d . 1 . . C H9 .6711 .5893 -.1548 .056 Uiso calc R 1 . . H C10 .65950(13) .7320(2) -.0732(3) .0432(7) Uani d . 1 . . C C11 .65215(17) .8829(2) .0043(3) .0572(8) Uani d . 1 . . C H11 .6416 .9380 .0566 .069 Uiso calc R 1 . . H C12 .68653(15) .8889(2) -.1035(3) .0461(7) Uani d . 1 . . C C13 .72032(16) .7587(2) -.2740(3) .0575(8) Uani d . 1 . . C H13A .7046 .6918 -.3028 .086 Uiso calc R 1 . . H H13B .7676 .7575 -.2468 .086 Uiso calc R 1 . . H H13C .7075 .8052 -.3515 .086 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl .1007(7) .0529(5) .0703(6) -.0139(5) .0254(5) .0053(4) O1 .135(3) .0402(13) .115(2) -.0088(14) .0628(19) -.0010(14) O2 .0777(16) .0627(16) .0859(17) -.0040(12) .0404(14) .0143(13) N1 .0425(12) .0425(13) .0436(12) .0003(10) .0128(10) .0020(10) N2 .0745(18) .0474(15) .0525(15) -.0083(13) .0295(14) -.0043(12) N3 .0606(17) .0522(17) .0654(17) -.0001(13) .0182(14) .0059(13) C1 .070(2) .056(2) .0597(19) -.0164(16) .0181(16) -.0017(16) C2 .0499(17) .0485(17) .0495(16) -.0064(13) .0136(14) .0017(14) C3 .0553(18) .0530(19) .0575(18) -.0054(14) .0237(15) .0082(15) C4 .0587(19) .0541(19) .0480(16) .0005(15) .0219(14) .0000(14) C5 .0461(16) .0447(16) .0443(15) .0014(12) .0093(13) .0022(12) C6 .0605(19) .0541(19) .0515(17) -.0067(15) .0268(15) .0038(14) C7 .070(2) .0477(17) .0560(18) -.0059(15) .0292(16) -.0064(14) C8 .0526(18) .0466(17) .0460(16) .0024(13) .0133(14) .0023(13) C9 .0474(16) .0439(16) .0502(16) .0027(13) .0105(14) -.0013(13) C10 .0424(15) .0441(16) .0435(15) -.0034(12) .0096(13) .0024(13) C11 .071(2) .0480(18) .0567(18) -.0043(16) .0219(17) -.0079(15) C12 .0507(16) .0385(15) .0507(16) -.0036(13) .0141(14) .0028(13) C13 .064(2) .0565(19) .0593(18) .0015(15) .0290(17) -.0007(15) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C10 N1 C12 105.3(2) C10 N1 C13 126.3(2) C12 N1 C13 128.2(2) C10 N2 C11 106.0(2) O2 N3 O1 123.0(3) O2 N3 C12 119.6(3) O1 N3 C12 117.3(3) C2 C1 Cl 111.8(2) C2 C1 H1A 109.2 Cl C1 H1A 109.2 C2 C1 H1B 109.2 Cl C1 H1B 109.2 H1A C1 H1B 107.9 C7 C2 C3 118.3(3) C7 C2 C1 120.3(3) C3 C2 C1 121.4(3) C4 C3 C2 121.2(3) C4 C3 H3 119.4 C2 C3 H3 119.4 C3 C4 C5 122.0(3) C3 C4 H4 119.0 C5 C4 H4 119.0 C6 C5 C4 116.5(3) C6 C5 C8 124.3(3) C4 C5 C8 119.2(3) C5 C6 C7 121.5(3) C5 C6 H6 119.3 C7 C6 H6 119.3 C2 C7 C6 120.5(3) C2 C7 H7 119.7 C6 C7 H7 119.7 C9 C8 C5 128.1(3) C9 C8 H8 116.0 C5 C8 H8 116.0 C8 C9 C10 121.3(3) C8 C9 H9 119.3 C10 C9 H9 119.3 N2 C10 N1 111.6(2) N2 C10 C9 123.3(3) N1 C10 C9 125.0(3) N2 C11 C12 109.9(3) N2 C11 H11 125.0 C12 C11 H11 125.0 C11 C12 N1 107.1(2) C11 C12 N3 126.5(3) N1 C12 N3 126.3(3) N1 C13 H13A 109.5 N1 C13 H13B 109.5 H13A C13 H13B 109.5 N1 C13 H13C 109.5 H13A C13 H13C 109.5 H13B C13 H13C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cl C1 . 1.781(3) ? O1 N3 . 1.230(3) ? O2 N3 . 1.224(3) ? N1 C10 . 1.356(3) ? N1 C12 . 1.375(3) ? N1 C13 . 1.467(4) ? N2 C10 . 1.336(4) ? N2 C11 . 1.339(4) ? N3 C12 . 1.407(4) ? C1 C2 . 1.491(4) ? C1 H1A . .9700 ? C1 H1B . .9700 ? C2 C7 . 1.382(4) ? C2 C3 . 1.385(4) ? C3 C4 . 1.358(4) ? C3 H3 . .9300 ? C4 C5 . 1.405(4) ? C4 H4 . .9300 ? C5 C6 . 1.388(4) ? C5 C8 . 1.449(4) ? C6 C7 . 1.393(4) ? C6 H6 . .9300 ? C7 H7 . .9300 ? C8 C9 . 1.327(4) ? C8 H8 . .9300 ? C9 C10 . 1.443(4) ? C9 H9 . .9300 ? C11 C12 . 1.365(4) ? C11 H11 . .9300 ? C13 H13A . .9600 ? C13 H13B . .9600 ? C13 H13C . .9600 ? loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion Cl C1 C2 C7 128.1(3) Cl C1 C2 C3 -52.2(4) C7 C2 C3 C4 1.3(5) C1 C2 C3 C4 -178.3(3) C2 C3 C4 C5 -0.1(5) C3 C4 C5 C6 -1.1(5) C3 C4 C5 C8 176.1(3) C4 C5 C6 C7 1.0(5) C8 C5 C6 C7 -175.9(3) C3 C2 C7 C6 -1.4(5) C1 C2 C7 C6 178.3(3) C5 C6 C7 C2 0.2(5) C6 C5 C8 C9 0.7(5) C4 C5 C8 C9 -176.2(3) C5 C8 C9 C10 176.1(3) C11 N2 C10 N1 1.0(3) C11 N2 C10 C9 -179.6(3) C12 N1 C10 N2 -0.9(3) C13 N1 C10 N2 -176.2(3) C12 N1 C10 C9 179.6(3) C13 N1 C10 C9 4.4(4) C8 C9 C10 N2 2.9(4) C8 C9 C10 N1 -177.7(3) C10 N2 C11 C12 -0.6(4) N2 C11 C12 N1 0.0(4) N2 C11 C12 N3 -179.0(3) C10 N1 C12 C11 0.5(3) C13 N1 C12 C11 175.7(3) C10 N1 C12 N3 179.6(3) C13 N1 C12 N3 -5.3(5) O2 N3 C12 C11 174.1(3) O1 N3 C12 C11 -7.6(5) O2 N3 C12 N1 -4.7(5) O1 N3 C12 N1 173.5(3) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 15366203