#------------------------------------------------------------------------------ #$Date: 2017-10-13 01:08:28 +0100 (Fri, 13 Oct 2017) $ #$Revision: 201955 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/85/2008514.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008514 loop_ _publ_author_name 'Hoong-Kun Fun' 'Kandasamy Chinnakali' 'Ibrahim Abdul Razak' 'Shu-zhong Zhan' 'Chuan-jiang Hu' 'Qingjin Meng' _publ_section_title ; Pipemidic acid hydrochloride ; _journal_issue 5 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 766 _journal_page_last 768 _journal_paper_doi 10.1107/S0108270198018277 _journal_volume 55 _journal_year 1999 _chemical_formula_moiety 'C14 H18 N5 O3 +.Cl-' _chemical_formula_sum 'C14 H18 Cl N5 O3' _chemical_formula_weight 339.78 _chemical_name_systematic ; Pipemidic Acid Hydrochloride ; _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 6.82280(10) _cell_length_b 7.1672(2) _cell_length_c 31.9396(6) _cell_measurement_reflns_used 7398 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 33.22 _cell_measurement_theta_min 2.91 _cell_volume 1561.86(6) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measurement_device ; Siemens SMART CCD area detector diffractometer ; _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.025 _diffrn_reflns_av_sigmaI/netI 0.029 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 9 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 41 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 10332 _diffrn_reflns_theta_max 27.49 _diffrn_reflns_theta_min 2.91 _exptl_absorpt_coefficient_mu 0.268 _exptl_absorpt_correction_T_max 0.953 _exptl_absorpt_correction_T_min 0.896 _exptl_absorpt_correction_type 'empirical (SADABS; Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.445 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 712 _exptl_crystal_size_max 0.42 _exptl_crystal_size_mid 0.26 _exptl_crystal_size_min 0.18 _refine_diff_density_max 0.66 _refine_diff_density_min -0.39 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack -0.01(9) _refine_ls_extinction_coef 0.004(2) _refine_ls_extinction_method 'SHELXTL (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 1.118 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 220 _refine_ls_number_reflns 3580 _refine_ls_number_restraints 4 _refine_ls_restrained_S_all 1.121 _refine_ls_R_factor_all 0.055 _refine_ls_R_factor_gt 0.049 _refine_ls_shift/su_max 0.000 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0600P)^2^+0.7411P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.130 _reflns_number_gt 3219 _reflns_number_total 3580 _reflns_threshold_expression I>2\s(I) _cod_data_source_file sk1259.cif _cod_data_source_block I _cod_database_code 2008514 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl1 -.17529(11) -.17141(9) .28831(2) .04117(19) Uani d . 1 . . Cl N1 .3628(4) .1270(3) .11473(7) .0379(5) Uani d . 1 . . N C2 .4707(4) .0476(4) .14481(7) .0317(5) Uani d . 1 . . C N3 .6392(3) .1171(3) .16177(7) .0395(5) Uani d . 1 . . N C4 .6985(4) .2781(4) .14649(9) .0409(6) Uani d . 1 . . C H4A .8137 .3291 .1570 .049 Uiso calc R 1 . . H C5 .6644(5) .5548(4) .09934(8) .0418(6) Uani d . 1 . . C C6 .5432(5) .6323(4) .06638(9) .0426(7) Uani d . 1 . . C C7 .3754(5) .5449(4) .05472(9) .0477(7) Uani d . 1 . . C H7A .2997 .6009 .0340 .057 Uiso calc R 1 . . H N8 .3100(4) .3806(4) .07124(8) .0539(7) Uani d D 1 . . N C9 .5983(4) .3771(4) .11526(8) .0367(6) Uani d . 1 . . C C10 .4269(4) .2911(4) .10060(8) .0364(6) Uani d . 1 . . C C11 .5963(5) .8104(5) .04492(11) .0533(8) Uani d . 1 . . C O12 .7488(5) .8990(4) .06114(10) .0737(8) Uani d . 1 . . O H12A .7991 .8339 .0793 .111 Uiso calc R 1 . . H O13 .5097(5) .8695(4) .01525(8) .0724(8) Uani d . 1 . . O N14 .4099(3) -.1203(3) .15930(7) .0378(5) Uani d . 1 . . N C15 .4895(4) -.2023(4) .19750(8) .0397(6) Uani d . 1 . . C H15A .6153 -.1460 .2039 .048 Uiso calc R 1 . . H H15B .5093 -.3351 .1935 .048 Uiso calc R 1 . . H C16 .3486(4) -.1701(4) .23364(8) .0379(5) Uani d . 1 . . C H16A .3971 -.2323 .2585 .045 Uiso calc R 1 . . H H16B .3394 -.0377 .2396 .045 Uiso calc R 1 . . H N17 .1508(4) -.2447(3) .22257(7) .0379(5) Uani d D 1 . . N C18 .0728(4) -.1660(4) .18239(9) .0400(6) Uani d . 1 . . C H18A .0491 -.0333 .1856 .048 Uiso calc R 1 . . H H18B -.0505 -.2257 .1754 .048 Uiso calc R 1 . . H C19 .2186(4) -.1979(4) .14772(9) .0395(6) Uani d . 1 . . C H19A .2313 -.3307 .1425 .047 Uiso calc R 1 . . H H19B .1723 -.1389 .1222 .047 Uiso calc R 1 . . H O20 .8136(4) .6359(3) .11314(8) .0640(7) Uani d . 1 . . O C21 .1160(4) .3066(5) .05908(10) .0648(10) Uani d D 1 . . C H21A .0316 .4083 .0503 .078 Uiso calc R 1 . . H H21B .0554 .2456 .0829 .078 Uiso calc R 1 . . H C22 .1390(7) .1690(6) .02375(12) .0805(12) Uani d D 1 . . C H22A .0201 .0989 .0206 .121 Uiso calc R 1 . . H H22B .2452 .0854 .0299 .121 Uiso calc R 1 . . H H22C .1665 .2349 -.0017 .121 Uiso calc R 1 . . H H17A .050(4) -.229(4) .2459(9) .045(9) Uiso d D 1 . . H H17B .167(6) -.386(4) .2224(12) .067(11) Uiso d D 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 .0449(3) .0314(3) .0472(3) .0012(3) .0083(3) .0015(3) N1 .0411(12) .0386(12) .0341(10) -.0109(10) -.0077(9) .0060(9) C2 .0315(12) .0372(13) .0263(11) -.0033(10) -.0013(10) .0023(10) N3 .0345(12) .0492(13) .0349(10) -.0071(10) -.0063(9) .0094(9) C4 .0386(14) .0460(16) .0380(13) -.0107(12) -.0073(11) .0018(11) C5 .0494(16) .0371(14) .0389(13) -.0132(13) .0019(13) -.0018(11) C6 .0531(17) .0358(14) .0388(14) -.0061(13) .0073(13) .0034(11) C7 .062(2) .0431(15) .0383(14) -.0048(15) -.0091(14) .0135(12) N8 .0614(17) .0516(15) .0486(14) -.0175(14) -.0209(14) .0183(11) C9 .0413(14) .0383(14) .0304(12) -.0092(11) -.0014(10) .0005(10) C10 .0455(15) .0364(14) .0274(11) -.0086(11) -.0047(10) .0050(10) C11 .067(2) .0386(15) .0542(17) -.0001(16) .0208(16) .0059(14) O12 .086(2) .0486(13) .087(2) -.0256(14) .0097(15) .0142(13) O13 .090(2) .0585(16) .0685(16) .0011(14) .0109(15) .0315(13) N14 .0351(11) .0425(13) .0358(11) -.0079(9) -.0026(9) .0112(9) C15 .0380(14) .0407(15) .0403(13) .0018(11) -.0008(11) .0140(11) C16 .0423(14) .0343(12) .0371(12) -.0029(13) -.0016(11) .0053(11) N17 .0403(12) .0298(10) .0435(12) -.0019(10) .0109(10) -.0007(9) C18 .0329(13) .0328(12) .0543(15) -.0024(12) -.0069(11) -.0038(13) C19 .0418(15) .0387(14) .0379(13) -.0106(11) -.0046(11) .0032(11) O20 .0669(16) .0537(14) .0714(15) -.0294(13) -.0147(13) .0065(11) C21 .074(2) .063(2) .0574(19) -.0108(19) -.0280(18) .0230(18) C22 .068(3) .093(3) .081(3) -.003(3) -.002(2) .001(3) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C10 N1 C2 116.0(2) N1 C2 N14 117.0(2) N1 C2 N3 126.4(2) N14 C2 N3 116.5(2) C4 N3 C2 115.5(2) N3 C4 C9 123.9(3) N3 C4 H4A 118.0 C9 C4 H4A 118.0 O20 C5 C9 122.7(3) O20 C5 C6 122.8(3) C9 C5 C6 114.6(3) C7 C6 C5 120.3(2) C7 C6 C11 118.2(3) C5 C6 C11 121.5(3) C6 C7 N8 124.6(3) C6 C7 H7A 117.7 N8 C7 H7A 117.7 C7 N8 C10 118.2(2) C7 N8 C21 120.0(3) C10 N8 C21 121.7(2) C4 C9 C10 114.9(2) C4 C9 C5 123.0(3) C10 C9 C5 122.1(3) N1 C10 N8 116.6(2) N1 C10 C9 123.2(2) N8 C10 C9 120.1(2) O13 C11 O12 121.9(3) O13 C11 C6 123.2(3) O12 C11 C6 114.9(3) C11 O12 H12A 109.5 C2 N14 C15 122.0(2) C2 N14 C19 121.6(2) C15 N14 C19 112.9(2) N14 C15 C16 109.8(2) N14 C15 H15A 109.7 C16 C15 H15A 109.7 N14 C15 H15B 109.7 C16 C15 H15B 109.7 H15A C15 H15B 108.2 N17 C16 C15 109.7(2) N17 C16 H16A 109.7 C15 C16 H16A 109.7 N17 C16 H16B 109.7 C15 C16 H16B 109.7 H16A C16 H16B 108.2 C16 N17 C18 112.8(2) C16 N17 H17A 113.3(18) C18 N17 H17A 110.1(18) C16 N17 H17B 105(2) C18 N17 H17B 114(2) H17A N17 H17B 101(3) N17 C18 C19 109.7(2) N17 C18 H18A 109.7 C19 C18 H18A 109.7 N17 C18 H18B 109.7 C19 C18 H18B 109.7 H18A C18 H18B 108.2 N14 C19 C18 110.1(2) N14 C19 H19A 109.6 C18 C19 H19A 109.6 N14 C19 H19B 109.6 C18 C19 H19B 109.6 H19A C19 H19B 108.1 N8 C21 C22 109.8(3) N8 C21 H21A 109.7 C22 C21 H21A 109.7 N8 C21 H21B 109.7 C22 C21 H21B 109.7 H21A C21 H21B 108.2 C21 C22 H22A 109.5 C21 C22 H22B 109.5 H22A C22 H22B 109.5 C21 C22 H22C 109.5 H22A C22 H22C 109.5 H22B C22 H22C 109.5 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C10 . 1.334(3) yes N1 C2 . 1.338(3) yes C2 N14 . 1.355(3) yes C2 N3 . 1.365(3) yes N3 C4 . 1.317(4) yes C4 C9 . 1.402(4) ? C4 H4A . .9300 ? C5 O20 . 1.252(4) yes C5 C9 . 1.443(4) ? C5 C6 . 1.449(4) ? C6 C7 . 1.357(4) ? C6 C11 . 1.493(4) ? C7 N8 . 1.365(4) yes C7 H7A . .9300 ? N8 C10 . 1.388(4) yes N8 C21 . 1.4784(19) yes C9 C10 . 1.403(4) ? C11 O13 . 1.194(4) yes C11 O12 . 1.324(5) yes O12 H12A . .8200 ? N14 C15 . 1.459(3) yes N14 C19 . 1.466(3) yes C15 C16 . 1.520(4) ? C15 H15A . .9700 ? C15 H15B . .9700 ? C16 N17 . 1.494(4) yes C16 H16A . .9700 ? C16 H16B . .9700 ? N17 C18 . 1.499(4) yes N17 H17A . 1.02(3) ? N17 H17B . 1.02(3) ? C18 C19 . 1.506(4) ? C18 H18A . .9700 ? C18 H18B . .9700 ? C19 H19A . .9700 ? C19 H19B . .9700 ? C21 C22 . 1.507(2) ? C21 H21A . .9700 ? C21 H21B . .9700 ? C22 H22A . .9600 ? C22 H22B . .9600 ? C22 H22C . .9600 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O12 H12A O20 1_555 0.82 1.79 2.551(4) 155 yes N17 H17A Cl1 1_555 1.02(3) 2.09(3) 3.104(3) 172(2) yes N17 H17B Cl1 4_545 1.02(3) 2.07(3) 3.083(2) 170(3) yes C22 H22B O13 1_545 0.96 2.42 3.328(6) 157 yes C18 H18B O20 1_445 0.96 2.41 3.168(4) 135 yes C7 H7A O13 3_465 0.93 2.54 3.405(4) 156 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C10 N1 C2 N14 -179.2(2) ? C10 N1 C2 N3 -0.9(4) ? N1 C2 N3 C4 0.0(4) ? N14 C2 N3 C4 178.3(2) ? C2 N3 C4 C9 0.8(4) ? O20 C5 C6 C7 -175.2(3) ? C9 C5 C6 C7 4.2(4) ? O20 C5 C6 C11 3.7(5) ? C9 C5 C6 C11 -176.8(3) ? C5 C6 C7 N8 -1.8(5) ? C11 C6 C7 N8 179.2(3) ? C6 C7 N8 C10 -3.3(5) ? C6 C7 N8 C21 174.3(3) ? N3 C4 C9 C10 -0.5(4) ? N3 C4 C9 C5 179.1(3) ? O20 C5 C9 C4 -2.0(5) ? C6 C5 C9 C4 178.5(3) ? O20 C5 C9 C10 177.6(3) ? C6 C5 C9 C10 -1.9(4) ? C2 N1 C10 N8 -176.1(3) ? C2 N1 C10 C9 1.1(4) ? C7 N8 C10 N1 -177.1(3) ? C21 N8 C10 N1 5.4(4) ? C7 N8 C10 C9 5.5(5) ? C21 N8 C10 C9 -171.9(3) ? C4 C9 C10 N1 -0.5(4) ? C5 C9 C10 N1 179.9(3) ? C4 C9 C10 N8 176.7(3) ? C5 C9 C10 N8 -3.0(4) ? C7 C6 C11 O13 -7.9(5) yes C5 C6 C11 O13 173.1(3) ? C7 C6 C11 O12 172.5(3) ? C5 C6 C11 O12 -6.5(4) yes N1 C2 N14 C15 -167.0(2) ? N3 C2 N14 C15 14.5(4) ? N1 C2 N14 C19 -9.7(4) ? N3 C2 N14 C19 171.8(2) ? C2 N14 C15 C16 100.0(3) ? C19 N14 C15 C16 -59.1(3) ? N14 C15 C16 N17 55.3(3) ? C15 C16 N17 C18 -54.8(3) ? C16 N17 C18 C19 54.9(3) ? C2 N14 C19 C18 -99.9(3) ? C15 N14 C19 C18 59.3(3) ? N17 C18 C19 N14 -55.1(3) ? C7 N8 C21 C22 95.0(4) ? C10 N8 C21 C22 -87.5(4) ? loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 4954996