#------------------------------------------------------------------------------ #$Date: 2015-04-02 12:22:18 +0100 (Thu, 02 Apr 2015) $ #$Revision: 134621 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/88/2008803.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008803 loop_ _publ_author_name 'Rybarczyk, Agnieszka J.' 'Olszak, Tomasz A.' 'Ma\/lecka, Magdalena' 'Nawrot-Modranka, Jolanta' _publ_section_title ; X-ray investigations of benzopyran derivatives substituted at position 3 ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1313 _journal_page_last 1315 _journal_paper_doi 10.1107/S0108270199004734 _journal_volume 55 _journal_year 1999 _chemical_formula_analytical 'C13 H15 N2 O5 P S' _chemical_formula_moiety 'C13 H15 N2 O5 P S' _chemical_formula_sum 'C13 H15 N2 O5 P S' _chemical_formula_weight 342.30 _chemical_name_systematic ; (E)-3-{[2-(dimethoxythiophosphoryl)- 2-methylhydrazino]methylidene}-3,4-dihydro-2H-1-benzopyran-2,4-dione ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL97 _cell_angle_alpha 90.00 _cell_angle_beta 101.200(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.866(2) _cell_length_b 12.3900(10) _cell_length_c 11.8450(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 22.68 _cell_measurement_theta_min 18.71 _cell_volume 1564.3(3) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ;MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1989a) ; _computing_data_reduction 'TEXSAN (Molecular Structure Corporation, 1989b)' _computing_molecular_graphics 'ORTEX (McArdle, 1995)' _computing_publication_material 'SHELXL97 and PARST (Nardelli, 1996)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 0.953 _diffrn_measured_fraction_theta_max 0.953 _diffrn_measurement_device_type 'Rigaku AFC-5S' _diffrn_measurement_method '2\q/\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.020 _diffrn_reflns_av_sigmaI/netI 0.050 _diffrn_reflns_limit_h_max 14 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 3800 _diffrn_reflns_theta_full 27.56 _diffrn_reflns_theta_max 27.56 _diffrn_reflns_theta_min 3.51 _diffrn_standards_decay_% <2 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.333 _exptl_absorpt_correction_T_max 0.860 _exptl_absorpt_correction_T_min 0.831 _exptl_absorpt_correction_type analytical _exptl_absorpt_process_details '(de Meulenar & Tompa, 1965)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.453 _exptl_crystal_density_method 'not measured' _exptl_crystal_description plate _exptl_crystal_F_000 712 _exptl_crystal_size_max 0.6 _exptl_crystal_size_mid 0.5 _exptl_crystal_size_min 0.4 _refine_diff_density_max 0.284 _refine_diff_density_min -0.198 _refine_ls_extinction_coef 0.0026(8) _refine_ls_extinction_method 'SHELXL97 (Sheldrick, 1997)' _refine_ls_goodness_of_fit_ref 0.943 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 258 _refine_ls_number_reflns 3617 _refine_ls_number_restraints 12 _refine_ls_restrained_S_all 0.943 _refine_ls_R_factor_all 0.093 _refine_ls_R_factor_gt 0.038 _refine_ls_shift/su_max 0.039 _refine_ls_shift/su_mean 0.003 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0563P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.110 _reflns_number_gt 2135 _reflns_number_total 3617 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file na1410.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0563P)^2^] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0563P)^2^] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_cell_volume 1564.3(4) _cod_database_code 2008803 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol P1 0.42727(5) 0.55808(5) 0.21463(5) 0.05111(18) Uani d . 1 . . P S2 0.47107(7) 0.41447(5) 0.26432(6) 0.0775(2) Uani d . 1 . . S O641 0.2213(2) 0.84030(10) -0.00540(10) 0.0623(4) Uani d . 1 . . O O61 0.10536(15) 1.03811(13) 0.23040(14) 0.0661(5) Uani d . 1 . . O O11 0.46725(14) 0.59724(13) 0.10030(13) 0.0630(4) Uani d . 1 . . O N3 0.27266(16) 0.57979(14) 0.18674(15) 0.0523(4) Uani d . 1 . . N C69 0.1208(2) 1.07835(19) 0.1254(2) 0.0573(6) Uani d . 1 . . C N4 0.23898(17) 0.68403(16) 0.14672(17) 0.0551(5) Uani d . 1 . . N C70 0.16339(19) 1.01544(18) 0.04389(19) 0.0509(5) Uani d . 1 . . C O13 0.48145(15) 0.65215(13) 0.29665(14) 0.0678(5) Uani d . 1 . . O C64 0.18930(18) 0.90042(18) 0.06799(18) 0.0499(5) Uani d . 1 . . C O621 0.11731(18) 0.90721(16) 0.35652(15) 0.0814(6) Uani d . 1 . . O C5 0.20463(18) 0.75747(19) 0.2136(2) 0.0503(5) Uani d . 1 . . C C62 0.1329(2) 0.9321(2) 0.2620(2) 0.0577(6) Uani d . 1 . . C C65 0.1779(2) 1.0628(2) -0.0589(2) 0.0630(6) Uani d . 1 . . C C68 0.0900(3) 1.1862(2) 0.1027(3) 0.0760(8) Uani d . 1 . . C C66 0.1506(3) 1.1695(2) -0.0799(3) 0.0755(8) Uani d . 1 . . C C63 0.17616(18) 0.86278(18) 0.17979(17) 0.0484(5) Uani d . 1 . . C C67 0.1054(3) 1.2305(2) 0.0007(3) 0.0832(9) Uani d . 1 . . C C31 0.1845(3) 0.4984(2) 0.1297(2) 0.0697(7) Uani d D 1 . . C H311 0.1081(17) 0.5162(19) 0.151(2) 0.081(9) Uiso d D 1 . . H H313 0.211(2) 0.4323(14) 0.163(2) 0.092(9) Uiso d D 1 . . H H312 0.174(2) 0.5024(19) 0.0494(11) 0.072(8) Uiso d D 1 . . H C12 0.5989(3) 0.6027(4) 0.0947(4) 0.0907(10) Uani d . 1 . . C H121 0.636(3) 0.535(3) 0.113(3) 0.117(13) Uiso d . 1 . . H H122 0.631(3) 0.653(3) 0.151(3) 0.116(14) Uiso d . 1 . . H H123 0.605(3) 0.624(3) 0.022(3) 0.119(13) Uiso d . 1 . . H C14 0.4979(3) 0.6458(3) 0.4193(3) 0.0874(9) Uani d D 1 . . C H143 0.548(2) 0.5842(16) 0.441(3) 0.114 Uiso d D 1 . . H H142 0.4213(17) 0.640(2) 0.441(2) 0.114 Uiso d D 1 . . H H141 0.549(2) 0.7033(17) 0.448(3) 0.114 Uiso d D 1 . . H H41 0.247(2) 0.705(2) 0.084(2) 0.067(8) Uiso d . 1 . . H H51 0.200(2) 0.7294(17) 0.2866(19) 0.062(7) Uiso d . 1 . . H H651 0.209(2) 1.022(2) -0.111(2) 0.075(8) Uiso d . 1 . . H H671 0.080(2) 1.296(2) -0.015(2) 0.082(9) Uiso d . 1 . . H H681 0.061(2) 1.220(2) 0.152(2) 0.073(9) Uiso d . 1 . . H H661 0.162(2) 1.202(2) -0.150(2) 0.072(8) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 P1 0.0535(3) 0.0494(3) 0.0504(3) 0.0021(3) 0.0098(2) 0.0024(3) S2 0.0939(5) 0.0564(4) 0.0824(5) 0.0184(3) 0.0179(4) 0.0148(3) O641 0.0735(10) 0.0659(10) 0.0523(9) 0.0130(8) 0.0241(8) -0.0029(8) O61 0.0667(10) 0.0683(11) 0.0647(11) 0.0024(8) 0.0166(8) -0.0213(9) O11 0.0590(9) 0.0724(10) 0.0615(9) 0.0046(8) 0.0216(7) 0.0099(8) N3 0.0538(10) 0.0509(10) 0.0527(10) 0.0017(8) 0.0117(8) 0.0017(8) C69 0.0419(11) 0.0612(14) 0.0636(14) -0.0035(10) -0.0029(10) -0.0143(12) N4 0.0590(12) 0.0599(12) 0.0502(11) 0.0116(9) 0.0197(9) 0.0065(10) C70 0.0378(11) 0.0576(12) 0.0544(12) -0.0042(9) 0.0018(9) -0.0082(11) O13 0.0750(11) 0.0620(10) 0.0627(10) -0.0124(8) 0.0045(8) -0.0053(8) C64 0.0374(11) 0.0590(13) 0.0533(12) 0.0030(9) 0.0092(9) -0.0072(11) O621 0.0994(14) 0.0943(14) 0.0596(11) 0.0066(11) 0.0382(10) -0.0118(10) C5 0.0366(10) 0.0667(14) 0.0494(12) -0.0001(10) 0.0129(9) -0.0021(11) C62 0.0490(12) 0.0664(15) 0.0576(14) 0.0002(11) 0.0103(10) -0.0143(12) C65 0.0533(14) 0.0697(16) 0.0615(15) -0.0024(12) -0.0002(11) 0.0001(13) C68 0.0687(18) 0.0633(17) 0.088(2) 0.0047(13) -0.0057(15) -0.0253(17) C66 0.0727(17) 0.0689(17) 0.0747(19) -0.0063(14) -0.0105(14) 0.0076(16) C63 0.0379(10) 0.0600(13) 0.0481(11) -0.0003(9) 0.0101(9) -0.0069(10) C67 0.0808(19) 0.0528(16) 0.099(2) -0.0028(15) -0.0250(17) -0.0022(17) C31 0.0667(18) 0.0784(19) 0.0622(17) -0.0211(15) 0.0079(13) 0.0062(15) C12 0.0641(19) 0.117(3) 0.099(3) 0.003(2) 0.0350(18) 0.012(3) C14 0.083(2) 0.107(3) 0.0660(18) -0.0056(18) 0.0008(16) -0.0208(18) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' P P 0.1023 0.0942 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _diffrn_standard_refln_index_h _diffrn_standard_refln_index_k _diffrn_standard_refln_index_l 0 0 -2 0 2 0 -1 1 -2 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O13 P1 O11 99.90(10) yes O13 P1 N3 104.30(10) yes O11 P1 N3 102.40(10) yes O13 P1 S2 117.70(10) yes O11 P1 S2 117.30(10) yes N3 P1 S2 113.10(10) yes C69 O61 C62 122.0(2) no C12 O11 P1 119.6(2) yes N4 N3 C31 112.0(2) yes N4 N3 P1 113.70(10) yes C31 N3 P1 121.6(2) yes O61 C69 C70 122.6(2) no O61 C69 C68 117.0(2) no C70 C69 C68 120.4(3) no C5 N4 N3 121.6(2) yes C5 N4 H41 115(2) no N3 N4 H41 123(2) no C65 C70 C69 118.9(2) no C65 C70 C64 122.0(2) no C69 C70 C64 119.1(2) no C14 O13 P1 123.4(2) yes O641 C64 C63 122.7(2) no O641 C64 C70 120.9(2) no C63 C64 C70 116.4(2) no N4 C5 C63 123.7(2) yes N4 C5 H51 112.0(10) no C63 C5 H51 124.0(10) no O621 C62 O61 115.7(2) no O621 C62 C63 126.7(2) no O61 C62 C63 117.6(2) no C66 C65 C70 120.7(3) no C66 C65 H651 120(2) no C70 C65 H651 119(2) no C67 C68 C69 119.4(3) no C67 C68 H681 123(2) no C69 C68 H681 117(2) no C65 C66 C67 119.8(3) no C65 C66 H661 120(2) no C67 C66 H661 120(2) no C5 C63 C64 121.1(2) no C5 C63 C62 116.7(2) no C64 C63 C62 122.2(2) no C68 C67 C66 120.8(3) no C68 C67 H671 119(2) no C66 C67 H671 120(2) no N3 C31 H311 104(2) no N3 C31 H313 107(2) no H311 C31 H313 108(2) no N3 C31 H312 112(2) no H311 C31 H312 109(2) no H313 C31 H312 116(2) no O11 C12 H121 109(2) no O11 C12 H122 103(2) no H121 C12 H122 111(3) no O11 C12 H123 108(2) no H121 C12 H123 112(3) no H122 C12 H123 114(3) no O13 C14 H143 106(2) no O13 C14 H142 110(2) no H143 C14 H142 111(2) no O13 C14 H141 106(2) no H143 C14 H141 105(2) no H142 C14 H141 118(2) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag P1 O13 . 1.558(2) yes P1 O11 . 1.577(2) yes P1 N3 . 1.670(2) yes P1 S2 . 1.9050(10) yes O641 C64 . 1.244(2) no O61 C69 . 1.380(3) no O61 C62 . 1.382(3) no O11 C12 . 1.446(3) yes N3 N4 . 1.400(2) yes N3 C31 . 1.463(3) yes C69 C70 . 1.388(3) no C69 C68 . 1.390(4) no N4 C5 . 1.308(3) no N4 H41 . 0.81(2) no C70 C65 . 1.388(3) no C70 C64 . 1.470(3) no O13 C14 . 1.431(3) yes C64 C63 . 1.437(3) no O621 C62 . 1.204(3) no C5 C63 . 1.382(3) yes C5 H51 . 0.94(2) no C62 C63 . 1.444(3) no C65 C66 . 1.367(4) no C65 H651 . 0.91(3) no C68 C67 . 1.367(4) no C68 H681 . 0.83(2) no C66 C67 . 1.381(4) no C66 H661 . 0.95(2) no C67 H671 . 0.87(3) no C31 H311 . 0.940(10) no C31 H313 . 0.930(10) no C31 H312 . 0.940(10) no C12 H121 . 0.94(3) no C12 H122 . 0.93(3) no C12 H123 . 0.91(3) no C14 H143 . 0.940(10) no C14 H142 . 0.920(10) no C14 H141 . 0.930(10) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N4 H41 O641 1_555 0.81(3) 1.97(2) 2.627(3) 138(2) yes