#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/88/2008839.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008839 loop_ _publ_author_name 'E. M. Elssfah' 'K. Chinnakali' 'H.-K. Fun' 'I. W. Mathison' 'E. K. Gan' 'M. Zubaid' 'T. W. Sam' 'K. S. Khoo' _publ_section_title ; Substituted clonidine derivatives. II. Ethyl 3,5-dichloro-4-(1-isobutyrylimidazolidin-2-ylideneamino)benzoate and ethyl 3,5-dichloro-4-(1,3-diisobutyrylimidazolidin-2-ylideneamino)benzoate ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first IUC9900085 _journal_volume 55 _journal_year 1999 _chemical_formula_sum 'C16 H19 Cl2 N3 O3' _chemical_formula_weight 372.24 _chemical_name_systematic ; 2-(4-carboethoxy-2,6-dichlorophenylimino)-1-isobutyrylimidazolidine ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 115.943(6) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.6707(10) _cell_length_b 10.4841(10) _cell_length_c 13.9479(12) _cell_measurement_reflns_used 44 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 12.551 _cell_measurement_theta_min 5.271 _cell_volume 1797.6(3) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1994)' _computing_data_reduction XSCANS _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXTL (Sheldrick, 1997) and PARST (Nardelli, 1995)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Siemens P4' _diffrn_measurement_method \q/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.022 _diffrn_reflns_av_sigmaI/netI 0.040 _diffrn_reflns_limit_h_max 15 _diffrn_reflns_limit_h_min -15 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 5095 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.53 _diffrn_standards_decay_% <3 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 0.380 _exptl_absorpt_correction_T_max 0.90 _exptl_absorpt_correction_T_min 0.82 _exptl_absorpt_correction_type 'empirical using XSCANS (Siemens, 1994)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.375 _exptl_crystal_density_method 'not measured' _exptl_crystal_description parallepiped _exptl_crystal_F_000 776 _exptl_crystal_size_max 0.60 _exptl_crystal_size_mid 0.40 _exptl_crystal_size_min 0.32 _refine_diff_density_max 0.21 _refine_diff_density_min -0.29 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 0.95 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 260 _refine_ls_number_reflns 4093 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 0.95 _refine_ls_R_factor_all 0.059 _refine_ls_R_factor_gt 0.039 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.0646P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_ref 0.110 _reflns_number_gt 2842 _reflns_number_total 4093 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file qb0092.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_database_code 2008839 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x+1/2, -y+1/2, z+1/2' '-x, -y, -z' '-x+1/2, y+1/2, -z+1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl1 0.57899(4) 0.75780(5) 0.14267(4) 0.05864(16) Uani d . 1 . . Cl Cl2 0.33308(4) 1.08679(6) 0.24195(3) 0.06105(17) Uani d . 1 . . Cl O1 0.74299(10) 0.80060(13) 0.60017(9) 0.0509(3) Uani d . 1 . . O O2 0.27206(12) 0.94372(14) -0.22036(10) 0.0592(4) Uani d . 1 . . O O3 0.17930(11) 1.08271(13) -0.16873(9) 0.0511(3) Uani d . 1 . . O N1 0.52145(12) 0.91326(14) 0.29179(10) 0.0471(4) Uani d . 1 . . N N2 0.44445(13) 0.71847(16) 0.31030(13) 0.0517(4) Uani d . 1 . . N N3 0.59200(11) 0.78862(14) 0.44809(10) 0.0405(3) Uani d . 1 . . N C1 0.45151(13) 0.92568(16) 0.18316(12) 0.0391(4) Uani d . 1 . . C C2 0.47113(14) 0.86446(16) 0.10417(13) 0.0415(4) Uani d . 1 . . C C3 0.40803(15) 0.88699(17) -0.00300(13) 0.0430(4) Uani d . 1 . . C C4 0.32291(13) 0.97260(16) -0.03470(12) 0.0390(4) Uani d . 1 . . C C5 0.30096(14) 1.03534(18) 0.04108(12) 0.0406(4) Uani d . 1 . . C C6 0.36429(14) 1.01054(17) 0.14833(12) 0.0406(4) Uani d . 1 . . C C7 0.51702(13) 0.81412(16) 0.34190(12) 0.0381(4) Uani d . 1 . . C C8 0.4692(2) 0.6184(3) 0.38767(19) 0.0708(7) Uani d . 1 . . C C9 0.55923(17) 0.6732(2) 0.48618(15) 0.0509(5) Uani d . 1 . . C C10 0.68837(13) 0.84877(17) 0.51308(11) 0.0382(4) Uani d . 1 . . C C11 0.72041(16) 0.96961(19) 0.47722(14) 0.0506(5) Uani d . 1 . . C C12 0.6614(3) 1.0809(2) 0.4987(2) 0.0821(8) Uani d . 1 . . C H12A 0.5843 1.0683 0.4605 0.123 Uiso calc R 1 . . H H12B 0.6813 1.1588 0.4755 0.123 Uiso calc R 1 . . H H12C 0.6815 1.0859 0.5737 0.123 Uiso calc R 1 . . H C13 0.84432(19) 0.9849(3) 0.53241(19) 0.0874(9) Uani d . 1 . . C H13A 0.8776 0.9128 0.5161 0.131 Uiso calc R 1 . . H H13B 0.8686 0.9900 0.6081 0.131 Uiso calc R 1 . . H H13C 0.8643 1.0614 0.5076 0.131 Uiso calc R 1 . . H C14 0.25691(14) 0.99600(17) -0.15102(12) 0.0425(4) Uani d . 1 . . C C15 0.11407(18) 1.1198(2) -0.27931(14) 0.0566(5) Uani d . 1 . . C C16 0.03463(18) 1.2152(2) -0.27872(17) 0.0653(6) Uani d . 1 . . C H16A -0.0118 1.2405 -0.3506 0.098 Uiso calc R 1 . . H H16B 0.0727 1.2884 -0.2383 0.098 Uiso calc R 1 . . H H16C -0.0085 1.1786 -0.2469 0.098 Uiso calc R 1 . . H H1N2 0.3907(17) 0.7174(19) 0.2510(17) 0.052(6) Uiso d . 1 . . H H3 0.4242(18) 0.846(2) -0.0538(17) 0.066(6) Uiso d . 1 . . H H5 0.2471(17) 1.0961(19) 0.0236(15) 0.051(6) Uiso d . 1 . . H H8A 0.405(2) 0.603(2) 0.399(2) 0.085(8) Uiso d . 1 . . H H8B 0.479(3) 0.538(4) 0.360(2) 0.131(13) Uiso d . 1 . . H H9A 0.6219(18) 0.616(2) 0.5193(16) 0.063(6) Uiso d . 1 . . H H9B 0.5345(18) 0.699(2) 0.5408(18) 0.067(6) Uiso d . 1 . . H H11 0.7012(17) 0.965(2) 0.4045(16) 0.057(6) Uiso d . 1 . . H H15A 0.081(2) 1.045(2) -0.3195(19) 0.080(8) Uiso d . 1 . . H H15B 0.170(2) 1.153(2) -0.3055(18) 0.081(7) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 0.0483(3) 0.0511(3) 0.0621(3) 0.0132(2) 0.0108(2) 0.0074(2) Cl2 0.0554(3) 0.0879(4) 0.0380(2) 0.0081(3) 0.0187(2) -0.0022(2) O1 0.0449(7) 0.0616(8) 0.0317(5) 0.0075(6) 0.0033(5) 0.0063(6) O2 0.0659(9) 0.0658(9) 0.0361(6) 0.0098(7) 0.0134(6) -0.0020(6) O3 0.0470(7) 0.0650(8) 0.0313(6) 0.0124(6) 0.0078(5) 0.0087(6) N1 0.0433(8) 0.0474(8) 0.0319(6) -0.0076(7) -0.0008(6) 0.0089(6) N2 0.0424(8) 0.0530(9) 0.0424(8) -0.0143(7) 0.0024(7) 0.0099(7) N3 0.0358(7) 0.0431(8) 0.0334(6) -0.0006(6) 0.0069(6) 0.0103(6) C1 0.0353(8) 0.0387(9) 0.0318(7) -0.0089(7) 0.0042(6) 0.0054(6) C2 0.0362(8) 0.0351(8) 0.0428(8) 0.0007(7) 0.0076(7) 0.0077(7) C3 0.0441(10) 0.0428(10) 0.0367(8) -0.0013(8) 0.0126(7) -0.0007(7) C4 0.0381(9) 0.0412(9) 0.0315(7) -0.0025(7) 0.0095(6) 0.0051(7) C5 0.0345(8) 0.0458(9) 0.0346(7) 0.0027(8) 0.0088(7) 0.0074(7) C6 0.0377(8) 0.0477(10) 0.0321(7) -0.0056(8) 0.0113(6) 0.0026(7) C7 0.0316(8) 0.0424(9) 0.0322(7) 0.0009(7) 0.0066(6) 0.0039(7) C8 0.0645(15) 0.0643(15) 0.0604(12) -0.0214(12) 0.0059(11) 0.0216(11) C9 0.0461(11) 0.0512(11) 0.0477(10) 0.0025(9) 0.0133(8) 0.0180(9) C10 0.0335(8) 0.0463(9) 0.0286(7) 0.0050(7) 0.0078(6) -0.0017(7) C11 0.0467(10) 0.0554(11) 0.0349(8) -0.0105(9) 0.0041(7) 0.0003(8) C12 0.116(2) 0.0480(12) 0.0674(14) 0.0001(14) 0.0262(14) -0.0023(11) C13 0.0553(14) 0.108(2) 0.0699(14) -0.0328(14) 0.0002(11) 0.0124(14) C14 0.0420(9) 0.0457(10) 0.0323(8) -0.0029(8) 0.0092(7) 0.0028(7) C15 0.0539(12) 0.0678(14) 0.0321(8) 0.0085(11) 0.0039(8) 0.0107(9) C16 0.0609(13) 0.0647(13) 0.0527(11) 0.0122(11) 0.0087(10) 0.0104(10) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cl1 C2 . 1.7379(18) ? Cl2 C6 . 1.7360(18) ? O1 C10 . 1.222(2) yes O2 C14 . 1.206(2) yes O3 C14 . 1.336(2) yes O3 C15 . 1.457(2) yes N1 C7 . 1.269(2) yes N1 C1 . 1.400(2) yes N2 C7 . 1.342(2) yes N2 C8 . 1.436(3) yes N3 C10 . 1.382(2) yes N3 C7 . 1.410(2) yes N3 C9 . 1.468(2) yes C1 C6 . 1.394(2) ? C1 C2 . 1.399(3) ? C2 C3 . 1.381(2) ? C3 C4 . 1.380(3) ? C4 C5 . 1.385(2) ? C4 C14 . 1.492(2) ? C5 C6 . 1.386(2) ? C8 C9 . 1.501(3) ? C10 C11 . 1.496(3) ? C11 C12 . 1.521(3) ? C11 C13 . 1.532(3) ? C15 C16 . 1.479(3) ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl 0.1484 0.1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C14 O3 C15 116.52(14) C7 N1 C1 119.86(14) C7 N2 C8 113.70(16) C10 N3 C7 130.45(14) C10 N3 C9 119.54(13) C7 N3 C9 109.86(14) C6 C1 C2 116.61(14) C6 C1 N1 120.79(16) C2 C1 N1 122.30(16) C3 C2 C1 122.01(16) C3 C2 Cl1 119.23(14) C1 C2 Cl1 118.75(12) C4 C3 C2 119.86(17) C3 C4 C5 119.88(14) C3 C4 C14 118.64(15) C5 C4 C14 121.47(15) C4 C5 C6 119.54(16) C5 C6 C1 122.08(16) C5 C6 Cl2 118.83(14) C1 C6 Cl2 119.08(12) N1 C7 N2 129.63(15) N1 C7 N3 123.10(15) N2 C7 N3 107.25(14) N2 C8 C9 103.73(17) N3 C9 C8 104.02(15) O1 C10 N3 117.11(16) O1 C10 C11 122.76(15) N3 C10 C11 120.10(13) C10 C11 C12 109.02(18) C10 C11 C13 109.97(17) C12 C11 C13 112.7(2) O2 C14 O3 124.22(15) O2 C14 C4 124.27(17) O3 C14 C4 111.51(15) O3 C15 C16 106.60(17) loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H1N2 O1 2_464 0.83(2) 2.20(2) 3.025(2) 175(2) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C7 N1 C1 C6 107.2(2) C7 N1 C1 C2 -79.3(2) C6 C1 C2 C3 0.3(3) N1 C1 C2 C3 -173.40(16) C6 C1 C2 Cl1 179.85(13) N1 C1 C2 Cl1 6.1(2) C1 C2 C3 C4 0.3(3) Cl1 C2 C3 C4 -179.23(14) C2 C3 C4 C5 -0.1(3) C2 C3 C4 C14 179.36(16) C3 C4 C5 C6 -0.6(3) C14 C4 C5 C6 179.91(16) C4 C5 C6 C1 1.3(3) C4 C5 C6 Cl2 -178.20(13) C2 C1 C6 C5 -1.1(3) N1 C1 C6 C5 172.73(16) C2 C1 C6 Cl2 178.35(13) N1 C1 C6 Cl2 -7.8(2) C1 N1 C7 N2 -8.7(3) C1 N1 C7 N3 173.17(17) C8 N2 C7 N1 177.0(2) C8 N2 C7 N3 -4.7(3) C10 N3 C7 N1 -9.6(3) C9 N3 C7 N1 174.88(18) C10 N3 C7 N2 171.89(17) C9 N3 C7 N2 -3.6(2) C7 N2 C8 C9 10.6(3) C10 N3 C9 C8 -166.33(19) C7 N3 C9 C8 9.7(2) N2 C8 C9 N3 -11.6(3) C7 N3 C10 O1 -174.19(17) C9 N3 C10 O1 0.9(2) C7 N3 C10 C11 7.5(3) C9 N3 C10 C11 -177.34(17) O1 C10 C11 C12 -96.6(2) N3 C10 C11 C12 81.6(2) O1 C10 C11 C13 27.4(3) N3 C10 C11 C13 -154.38(19) C15 O3 C14 O2 -3.6(3) C15 O3 C14 C4 176.04(16) C3 C4 C14 O2 0.9(3) C5 C4 C14 O2 -179.65(18) C3 C4 C14 O3 -178.77(16) C5 C4 C14 O3 0.7(2) C14 O3 C15 C16 179.89(17) _journal_paper_doi 10.1107/S0108270199098996