#------------------------------------------------------------------------------ #$Date: 2025-08-18 23:52:38 +0100 (Mon, 18 Aug 2025) $ #$Revision: 301791 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/89/2008921.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2008921 loop_ _publ_author_name 'Miguel Harvey' 'Sergio Baggio' 'Ricardo Baggio' 'Alvaro Mombr\'u' _publ_section_title ;Tetraaqua(2,2'-bipyridyl-N,N')cadmium(II) sulfate and catena-poly[[[diaqua(2,2'-bipyridyl-N,N')cadmium(II)]-\m-(sulfato-O:O')] hydrate] ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1457 _journal_page_last 1460 _journal_paper_doi 10.1107/S0108270199007982 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[Cd (C10 H8 N2) (H2 O)4] S O4' _chemical_formula_sum 'C10 H16 Cd N2 O8 S' _chemical_formula_weight 436.71 _chemical_name_systematic ; Tetraaqua-(2,2'-bipyridyl-N,N'))-cadmium(ii) sulfate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 92.47(3) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 10.262(2) _cell_length_b 12.073(2) _cell_length_c 12.357(3) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 15.0 _cell_measurement_theta_min 7.5 _cell_volume 1529.5(5) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1988) ; _computing_data_reduction 'MSC/AFC Diffractometer Control Software' _computing_molecular_graphics 'XP in SHELXTL/PC (Sheldrick, 1994)' _computing_publication_material 'PARST (Nardelli, 1983) and CSD (Allen & Kennard, 1993)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device 'Rigaku AFC-7S' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.035 _diffrn_reflns_av_sigmaI/netI 0.055 _diffrn_reflns_limit_h_max 13 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 15 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 3717 _diffrn_reflns_theta_max 27.51 _diffrn_reflns_theta_min 2.36 _diffrn_standards_decay_% <2 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu 1.60 _exptl_absorpt_correction_T_max 0.77 _exptl_absorpt_correction_T_min 0.71 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(Molecular Structure Corporation, 1988)' _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.90 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 872 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.16 _refine_diff_density_max 0.914 _refine_diff_density_min -0.895 _refine_ls_extinction_coef 0.0100(10) _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_all 1.016 _refine_ls_goodness_of_fit_ref 1.046 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 263 _refine_ls_number_reflns 3527 _refine_ls_number_restraints 30 _refine_ls_restrained_S_all 1.023 _refine_ls_restrained_S_obs 1.055 _refine_ls_R_factor_all 0.045 _refine_ls_R_factor_gt 0.035 _refine_ls_shift/su_max <0.01 _refine_ls_shift/su_mean <0.01 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.061P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_all 0.102 _refine_ls_wR_factor_ref 0.095 _reflns_number_gt 2916 _reflns_number_total 3527 _reflns_observed_criterion I>2\s(I) _cod_data_source_file ha1260.cif _cod_data_source_block 1 _cod_depositor_comments ; The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (13 times). '_geom_bond_publ_flag' value 'N' changed to 'n' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (13 times). Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (13 times). '_geom_bond_publ_flag' value 'N' changed to 'n' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (13 times). '_geom_angle_publ_flag' value 'N' changed to 'n' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (47 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.061P)^2^] where P = (Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.061P)^2^] where P = (Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2008921 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd1 0.0237(2) 0.0349(2) 0.0283(2) -0.00041(8) -0.00127(9) 0.00062(8) S1 0.0309(4) 0.0281(4) 0.0263(3) 0.0017(3) -0.0050(3) -0.0018(3) O1A 0.047(3) 0.031(2) 0.054(3) 0.000(2) -0.005(2) 0.003(2) O1B 0.027(6) 0.066(10) 0.071(11) 0.002(6) -0.012(7) 0.036(9) O2A 0.050(2) 0.049(3) 0.028(2) 0.013(2) -0.0013(14) -0.003(2) O2B 0.075(11) 0.054(10) 0.052(8) 0.040(9) -0.039(7) -0.036(7) O3A 0.040(2) 0.042(3) 0.040(2) -0.005(2) -0.005(2) -0.007(2) O3B 0.046(9) 0.022(6) 0.088(15) -0.016(6) 0.038(9) -0.004(8) O4 0.0361(13) 0.0491(13) 0.0365(12) 0.0099(11) 0.0064(9) 0.0078(10) O1W 0.050(2) 0.0395(14) 0.085(2) 0.0045(14) 0.034(2) 0.014(2) O2W 0.0381(13) 0.0385(13) 0.0333(12) 0.0042(10) -0.0025(10) -0.0016(10) O3W 0.055(2) 0.0363(13) 0.0330(12) 0.0088(12) -0.0110(11) -0.0013(10) O4W 0.046(2) 0.0382(14) 0.0370(12) -0.0044(11) 0.0000(11) 0.0018(11) N1 0.0271(14) 0.046(2) 0.0307(13) 0.0002(11) 0.0023(11) -0.0008(11) N2 0.0282(13) 0.0422(15) 0.0320(12) 0.0033(11) -0.0043(10) -0.0027(11) C1 0.038(2) 0.065(3) 0.034(2) 0.002(2) 0.0025(15) -0.005(2) C2 0.047(2) 0.074(3) 0.047(2) 0.011(2) 0.016(2) -0.001(2) C3 0.028(2) 0.077(3) 0.059(2) 0.001(2) 0.012(2) 0.010(2) C4 0.025(2) 0.053(2) 0.056(2) -0.0056(15) 0.0016(15) 0.007(2) C5 0.027(2) 0.0338(15) 0.036(2) -0.0009(12) 0.0009(12) 0.0063(13) C6 0.0280(14) 0.0309(14) 0.0357(15) 0.0000(12) -0.0054(12) 0.0053(12) C7 0.033(2) 0.055(2) 0.051(2) -0.006(2) -0.012(2) -0.007(2) C8 0.061(3) 0.051(2) 0.048(2) 0.005(2) -0.020(2) -0.017(2) C9 0.062(2) 0.050(2) 0.035(2) 0.015(2) -0.006(2) -0.011(2) C10 0.034(2) 0.059(2) 0.038(2) 0.012(2) -0.0032(13) -0.006(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol Cd1 0.73072(2) 0.03754(2) 0.27415(2) 0.02901(12) Uani d . 1 . Cd S1 0.43652(7) 0.23539(6) 0.00416(6) 0.0286(2) Uani d D 1 . S O1A 0.4193(5) 0.3527(3) -0.0224(5) 0.0443(12) Uani d PD 0.761(13) 1 O O1B 0.4021(14) 0.3328(12) -0.0665(14) 0.055(5) Uani d PD 0.239(13) 2 O O2A 0.4384(5) 0.2218(5) 0.1233(3) 0.0423(11) Uani d PD 0.761(13) 1 O O2B 0.4616(14) 0.2757(17) 0.1142(9) 0.062(6) Uani d PD 0.239(13) 2 O O3A 0.3238(4) 0.1742(4) -0.0416(4) 0.0406(12) Uani d PD 0.761(13) 1 O O3B 0.3312(11) 0.1562(11) -0.0048(18) 0.051(6) Uani d PD 0.239(13) 2 O O4 0.5580(2) 0.1908(2) -0.0376(2) 0.0404(5) Uani d D 1 . O O1W 0.5436(3) 0.0013(3) 0.3551(3) 0.0572(8) Uani d D 1 . O O2W 0.6489(2) 0.2189(2) 0.2669(2) 0.0368(5) Uani d D 1 . O O3W 0.6843(3) 0.0418(2) 0.0941(2) 0.0419(6) Uani d D 1 . O O4W 0.7306(3) -0.1550(2) 0.2567(2) 0.0405(6) Uani d D 1 . O N1 0.9508(3) 0.0225(2) 0.2368(2) 0.0345(6) Uani d . 1 . N N2 0.8574(3) 0.1050(2) 0.4211(2) 0.0343(6) Uani d . 1 . N C1 0.9932(4) -0.0310(3) 0.1501(3) 0.0456(9) Uani d . 1 . C H1A 0.9320(4) -0.0624(3) 0.1016(3) 0.055 Uiso calc R 1 . H C2 1.1231(5) -0.0413(4) 0.1298(4) 0.0553(11) Uani d . 1 . C H2A 1.1496(5) -0.0801(4) 0.0695(4) 0.066 Uiso calc R 1 . H C3 1.2134(4) 0.0073(4) 0.2010(4) 0.0544(10) Uani d . 1 . C H3A 1.3020(4) 0.0030(4) 0.1884(4) 0.065 Uiso calc R 1 . H C4 1.1717(4) 0.0616(3) 0.2902(3) 0.0449(8) Uani d . 1 . C H4A 1.2316(4) 0.0947(3) 0.3388(3) 0.054 Uiso calc R 1 . H C5 1.0378(3) 0.0672(3) 0.3079(3) 0.0323(6) Uani d . 1 . C C6 0.9856(3) 0.1175(3) 0.4067(3) 0.0317(6) Uani d . 1 . C C7 1.0650(4) 0.1725(3) 0.4832(3) 0.0468(9) Uani d . 1 . C H7A 1.1536(4) 0.1810(3) 0.4724(3) 0.056 Uiso calc R 1 . H C8 1.0113(5) 0.2145(3) 0.5753(3) 0.0544(10) Uani d . 1 . C H8A 1.0633(5) 0.2518(3) 0.6269(3) 0.065 Uiso calc R 1 . H C9 0.8807(4) 0.2006(3) 0.5900(3) 0.0492(9) Uani d . 1 . C H9A 0.8426(4) 0.2276(3) 0.6516(3) 0.059 Uiso calc R 1 . H C10 0.8073(4) 0.1453(3) 0.5108(3) 0.0437(8) Uani d . 1 . C H10A 0.7186(4) 0.1357(3) 0.5205(3) 0.052 Uiso calc R 1 . H H1WA 0.501(8) 0.047(4) 0.385(6) 0.13(3) Uiso d D 1 . H H1WB 0.542(6) -0.049(3) 0.397(4) 0.065(16) Uiso d D 1 . H H2WA 0.625(5) 0.245(4) 0.319(3) 0.063(15) Uiso d D 1 . H H2WB 0.599(4) 0.225(4) 0.219(3) 0.063(15) Uiso d D 1 . H H3WA 0.678(5) -0.019(2) 0.073(4) 0.053(14) Uiso d D 1 . H H3WB 0.637(5) 0.079(3) 0.059(4) 0.065(16) Uiso d D 1 . H H4WA 0.715(5) -0.175(4) 0.198(2) 0.070(16) Uiso d D 1 . H H4WB 0.695(5) -0.192(4) 0.296(3) 0.076(18) Uiso d D 1 . H loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag O1W Cd1 O3W 107.18(13) n O1W Cd1 N1 157.97(11) n O3W Cd1 N1 88.38(11) n O1W Cd1 N2 100.34(12) n O3W Cd1 N2 147.82(10) n N1 Cd1 N2 70.71(10) n O1W Cd1 O4W 81.39(11) n O3W Cd1 O4W 86.13(9) n N1 Cd1 O4W 84.30(10) n N2 Cd1 O4W 114.65(9) n O1W Cd1 O2W 83.52(10) n O3W Cd1 O2W 83.14(9) n N1 Cd1 O2W 114.43(9) n N2 Cd1 O2W 83.74(9) n O4W Cd1 O2W 158.01(9) n O3B S1 O2B 113.2(6) n O3A S1 O1A 108.4(3) n O3B S1 O4 112.0(6) n O2B S1 O4 109.3(5) n O3A S1 O4 110.3(2) n O1A S1 O4 111.8(2) n O3A S1 O2A 107.7(2) n O1A S1 O2A 109.1(2) n O4 S1 O2A 109.5(2) n O3B S1 O1B 108.5(6) n O2B S1 O1B 108.1(5) n O4 S1 O1B 105.4(5) n C1 N1 C5 119.3(3) n C1 N1 Cd1 123.2(3) n C5 N1 Cd1 117.6(2) n C10 N2 C6 119.0(3) n C10 N2 Cd1 123.5(2) n C6 N2 Cd1 116.9(2) n N1 C1 C2 122.8(4) n C1 C2 C3 118.4(4) n C4 C3 C2 119.5(4) n C3 C4 C5 119.4(4) n N1 C5 C4 120.6(3) n N1 C5 C6 116.8(3) n C4 C5 C6 122.5(3) n N2 C6 C7 120.8(3) n N2 C6 C5 116.9(3) n C7 C6 C5 122.2(3) n C8 C7 C6 119.5(4) n C9 C8 C7 119.4(3) n C8 C9 C10 118.2(4) n N2 C10 C9 123.2(4) n loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cd1 O1W . 2.246(3) y Cd1 O3W . 2.255(3) y Cd1 N1 . 2.332(3) y Cd1 N2 . 2.334(3) y Cd1 O4W . 2.334(3) y Cd1 O2W . 2.345(2) y S1 O3B . 1.444(6) y S1 O2B . 1.456(6) y S1 O3A . 1.465(4) y S1 O1A . 1.463(4) y S1 O4 . 1.471(2) y S1 O2A . 1.481(3) y S1 O1B . 1.498(7) y N1 C1 . 1.339(5) n N1 C5 . 1.339(4) n N2 C10 . 1.334(4) n N2 C6 . 1.344(4) n C1 C2 . 1.373(6) n C2 C3 . 1.381(7) n C3 C4 . 1.367(6) n C4 C5 . 1.402(5) n C5 C6 . 1.484(5) n C6 C7 . 1.390(5) n C7 C8 . 1.383(6) n C8 C9 . 1.370(6) n C9 C10 . 1.381(5) n loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O1W H1WA O1B 4_566 0.80(6) 1.88(6) 2.680(15) 170(6) O1W H1WA O1A 4_566 0.80(6) 1.88(6) 2.681(6) 169(6) O1W H1WB O1A 2_645 0.80(4) 1.97(4) 2.751(6) 162(4) O1W H1WB O2B 2_645 0.80(4) 2.12(4) 2.75(2) 135(3) O2W H2WA O4 4_566 0.75(3) 2.08(3) 2.845(4) 177(3) O2W H2WB O2A 1_555 0.77(3) 1.98(3) 2.735(5) 164(3) O2W H2WB O2B 1_555 0.77(3) 1.96(4) 2.722(14) 165(3) O3W H3WA O3A 3_655 0.78(3) 1.90(2) 2.688(6) 170(2) O3W H3WA O3B 3_655 0.78(3) 1.85(3) 2.636(15) 172(3) O3W H3WB O4 1_555 0.77(4) 1.95(4) 2.717(4) 166(4) O4W H4WB O2B 2_645 0.76(4) 2.03(5) 2.722(15) 150(4) O4W H4WB O2A 2_645 0.76(4) 2.01(4) 2.764(5) 165(4) O4W H4WA O3B 3_655 0.77(3) 2.42(3) 3.15(2) 157(2) O4W H4WA O3A 3_655 0.77(3) 1.95(3) 2.703(6) 162(3) C4 H4A O1B 4_666 0.93 2.24 3.160(15) 169 loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 168307683