#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/90/2009077.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2009077 loop_ _publ_author_name 'Yu-Peng Tian' 'Wen-Tao Yu' 'Min-Hua Jiang' 'S. Shanmuga Sundara Raj' 'Ping Yang' 'Hoong-Kun Fun' _publ_section_title ; Diiodobis(4-methoxybenzaldehyde thiosemicarbazone-S)cadmium(II) ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1639 _journal_page_last 1641 _journal_paper_doi 10.1107/S0108270199008537 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac '[Cd (C9 H11 N3 O S)2 I2]' _chemical_formula_sum 'C18 H22 Cd I2 N6 O2 S2' _chemical_formula_weight 784.74 _chemical_name_systematic ; Diiodobis(4-methoxybenzaldehyde thiosemicarbazone)cadmium(II) ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 111.160(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 14.02680(10) _cell_length_b 15.0988(2) _cell_length_c 13.3565(2) _cell_measurement_reflns_used 8192 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 33.21 _cell_measurement_theta_min 2.96 _cell_volume 2638.02(19) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material 'SHELXTL and PLATON (Spek, 1990)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full 0.986 _diffrn_measured_fraction_theta_max 0.986 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.026 _diffrn_reflns_av_sigmaI/netI 0.031 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 19 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 17 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 16220 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.5 _diffrn_reflns_theta_min 2.96 _exptl_absorpt_coefficient_mu 3.352 _exptl_absorpt_correction_T_max 0.366 _exptl_absorpt_correction_T_min 0.250 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.976 _exptl_crystal_density_method 'not measured' _exptl_crystal_description parallelepiped _exptl_crystal_F_000 1496 _exptl_crystal_size_max 0.48 _exptl_crystal_size_mid 0.44 _exptl_crystal_size_min 0.30 _refine_diff_density_max 1.037 _refine_diff_density_min -1.568 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.149 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 280 _refine_ls_number_reflns 5978 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.149 _refine_ls_R_factor_all 0.042 _refine_ls_R_factor_gt 0.037 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0302P)^2^+4.3508P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref 0.090 _reflns_number_gt 5370 _reflns_number_total 5978 _reflns_threshold_expression 'I > 2\s(I)' _cod_data_source_file sk1305.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_original_cell_volume 2638.02(6) _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2009077 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cd1 .42157(2) .721008(19) .72666(2) .03963(8) Uani d . 1 . . Cd I1 .58860(2) .628970(18) .72132(2) .04802(9) Uani d . 1 . . I I2 .26804(3) .62151(2) .74370(3) .05813(10) Uani d . 1 . . I S1 .35362(7) .82196(7) .55920(8) .0415(2) Uani d . 1 . . S S2 .48263(7) .83943(6) .87550(7) .03730(19) Uani d . 1 . . S O1 1.0931(2) .9790(2) .6718(3) .0678(10) Uani d . 1 . . O O2 -.0050(3) 1.2315(2) 1.1131(3) .0612(8) Uani d . 1 . . O N1 .6292(2) .8796(2) .5674(3) .0405(7) Uani d . 1 . . N N2 .5372(2) .8369(2) .5492(3) .0411(7) Uani d . 1 . . N H2B .5257 .7856 .5191 .049 Uiso calc R 1 . . H N3 .4867(3) .9565(2) .6208(3) .0539(9) Uani d . 1 . . N H3B .5437 .9820 .6282 .065 Uiso calc R 1 . . H H3C .4423 .9832 .6406 .065 Uiso calc R 1 . . H N4 .2810(2) .9787(2) .9491(3) .0407(7) Uani d . 1 . . N N5 .3672(2) .9310(2) .9538(3) .0400(7) Uani d . 1 . . N H5B .4186 .9275 1.0132 .048 Uiso calc R 1 . . H N6 .2894(2) .8949(2) .7773(3) .0448(8) Uani d . 1 . . N H6B .2359 .9234 .7761 .054 Uiso calc R 1 . . H H6C .2902 .8691 .7202 .054 Uiso calc R 1 . . H C1 .8012(3) .8727(3) .5773(3) .0407(8) Uani d . 1 . . C C2 .8135(3) .9648(3) .5800(4) .0480(10) Uani d . 1 . . C H2A .7563 1.0012 .5615 .058 Uiso calc R 1 . . H C3 .9099(3) 1.0023(3) .6097(4) .0512(10) Uani d . 1 . . C H3A .9175 1.0635 .6105 .061 Uiso calc R 1 . . H C4 .9947(3) .9478(3) .6382(4) .0462(9) Uani d . 1 . . C C5 .9831(3) .8562(3) .6324(4) .0526(11) Uani d . 1 . . C H5A 1.0402 .8197 .6490 .063 Uiso calc R 1 . . H C6 .8872(3) .8198(3) .6022(4) .0479(10) Uani d . 1 . . C H6A .8799 .7586 .5982 .057 Uiso calc R 1 . . H C7 .7008(3) .8339(3) .5563(3) .0436(9) Uani d . 1 . . C H7A .6890 .7752 .5345 .052 Uiso calc R 1 . . H C8 .4674(3) .8759(2) .5787(3) .0357(7) Uani d . 1 . . C C9 1.1084(4) 1.0726(4) .6739(6) .0773(18) Uani d . 1 . . C H9A 1.1803 1.0852 .6989 .116 Uiso calc R 1 . . H H9B 1.0790 1.0994 .7213 .116 Uiso calc R 1 . . H H9C 1.0760 1.0962 .6028 .116 Uiso calc R 1 . . H C10 .2115(3) 1.0789(3) 1.0455(3) .0392(8) Uani d . 1 . . C C11 .1091(3) 1.0708(3) .9809(3) .0446(9) Uani d . 1 . . C H11A .0903 1.0314 .9236 .054 Uiso calc R 1 . . H C12 .0342(3) 1.1205(3) 1.0003(4) .0479(10) Uani d . 1 . . C H12A -.0340 1.1143 .9563 .057 Uiso calc R 1 . . H C13 .0620(3) 1.1796(3) 1.0859(4) .0452(9) Uani d . 1 . . C C14 .1645(3) 1.1906(3) 1.1497(4) .0505(10) Uani d . 1 . . C H14A .1834 1.2321 1.2049 .061 Uiso calc R 1 . . H C15 .2380(3) 1.1395(3) 1.1309(3) .0490(10) Uani d . 1 . . C H15A .3061 1.1454 1.1755 .059 Uiso calc R 1 . . H C16 .2925(3) 1.0252(3) 1.0328(3) .0407(8) Uani d . 1 . . C H16A .3559 1.0247 1.0883 .049 Uiso calc R 1 . . H C17 .3701(3) .8907(2) .8668(3) .0342(7) Uani d . 1 . . C C18 -.1102(4) 1.2158(4) 1.0635(6) .0812(18) Uani d . 1 . . C H18A -.1473 1.2570 1.0904 .122 Uiso calc R 1 . . H H18B -.1254 1.1564 1.0788 .122 Uiso calc R 1 . . H H18C -.1300 1.2232 .9873 .122 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cd1 .03954(15) .03407(14) .04644(16) .00344(11) .01693(12) .00239(11) I1 .03901(14) .04346(15) .06101(17) .01086(11) .01734(12) .00414(12) I2 .0632(2) .05882(19) .05819(18) -.02184(14) .02888(15) -.00627(13) S1 .0314(4) .0493(5) .0406(5) -.0001(4) .0092(4) .0064(4) S2 .0287(4) .0379(5) .0423(5) .0042(3) .0092(3) .0007(4) O1 .0299(14) .0544(19) .106(3) .0014(14) .0085(16) .0163(19) O2 .0492(18) .059(2) .079(2) .0077(15) .0279(16) -.0105(17) N1 .0360(16) .0383(17) .0482(18) -.0054(13) .0162(14) -.0026(14) N2 .0391(17) .0347(16) .0524(18) -.0053(13) .0200(14) -.0083(14) N3 .056(2) .0388(18) .077(3) -.0050(16) .037(2) -.0117(18) N4 .0375(16) .0376(17) .0477(18) .0063(13) .0160(14) .0024(14) N5 .0337(15) .0415(17) .0427(16) .0076(13) .0112(13) .0011(14) N6 .0339(16) .0465(19) .0475(18) .0112(14) .0068(14) -.0072(15) C1 .0391(19) .0363(19) .050(2) .0001(15) .0194(16) -.0028(16) C2 .0338(19) .037(2) .070(3) .0040(16) .0150(18) .0002(19) C3 .036(2) .036(2) .077(3) .0022(16) .015(2) .003(2) C4 .0315(18) .048(2) .056(2) .0030(16) .0130(17) .0044(19) C5 .041(2) .041(2) .076(3) .0127(18) .022(2) .007(2) C6 .047(2) .0336(19) .069(3) .0046(17) .028(2) .0003(18) C7 .043(2) .037(2) .052(2) -.0030(16) .0192(17) -.0087(17) C8 .0377(18) .0351(18) .0333(17) .0007(14) .0117(14) .0033(14) C9 .041(2) .059(3) .114(5) -.009(2) .007(3) .021(3) C10 .0401(19) .0349(19) .045(2) .0007(15) .0187(16) .0022(15) C11 .044(2) .0342(19) .054(2) -.0056(16) .0149(18) -.0070(17) C12 .038(2) .039(2) .064(3) -.0041(16) .0150(18) -.0009(18) C13 .046(2) .037(2) .058(2) .0018(17) .0253(19) -.0004(18) C14 .050(2) .050(2) .049(2) .0036(19) .0156(19) -.0107(19) C15 .040(2) .055(3) .048(2) .0023(18) .0113(17) -.0063(19) C16 .0379(19) .0363(19) .048(2) -.0021(16) .0161(16) .0005(16) C17 .0315(16) .0283(16) .0430(18) .0010(13) .0136(14) .0030(14) C18 .051(3) .081(4) .114(5) .005(3) .033(3) -.022(4) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' S S 0.1246 0.1234 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' I I -0.4742 1.8119 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag S2 Cd1 S1 100.02(3) y S2 Cd1 I2 111.93(2) y S1 Cd1 I2 110.14(2) y S2 Cd1 I1 108.76(2) y S1 Cd1 I1 109.09(3) y I2 Cd1 I1 115.730(10) y C8 S1 Cd1 96.60(10) y C17 S2 Cd1 102.60(10) y C4 O1 C9 118.1(4) ? C13 O2 C18 119.0(4) ? C7 N1 N2 116.9(3) ? C8 N2 N1 119.0(3) ? C16 N4 N5 114.3(3) ? C17 N5 N4 120.0(3) ? C6 C1 C2 118.5(4) ? C6 C1 C7 120.9(4) ? C2 C1 C7 120.4(4) ? C3 C2 C1 120.8(4) ? C4 C3 C2 119.3(4) ? O1 C4 C3 123.4(4) ? O1 C4 C5 116.2(4) ? C3 C4 C5 120.4(4) ? C6 C5 C4 119.7(4) ? C5 C6 C1 121.2(4) ? N1 C7 C1 120.7(4) ? N2 C8 N3 118.4(4) ? N2 C8 S1 119.4(3) ? N3 C8 S1 122.2(3) ? C11 C10 C15 118.2(4) ? C11 C10 C16 123.7(4) ? C15 C10 C16 118.0(4) ? C10 C11 C12 121.3(4) ? C11 C12 C13 119.6(4) ? O2 C13 C12 124.7(4) ? O2 C13 C14 115.2(4) ? C12 C13 C14 120.1(4) ? C15 C14 C13 119.7(4) ? C14 C15 C10 121.1(4) ? N4 C16 C10 123.4(4) ? N6 C17 N5 119.0(3) ? N6 C17 S2 123.3(3) ? N5 C17 S2 117.6(3) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Cd1 S2 . 2.5795(10) y Cd1 S1 . 2.5875(10) y Cd1 I2 . 2.7020(4) y Cd1 I1 . 2.7470(4) y S1 C8 . 1.725(4) y S2 C17 . 1.724(4) y O1 C4 . 1.372(5) y O1 C9 . 1.429(6) y O2 C13 . 1.368(5) y O2 C18 . 1.403(6) y N1 C7 . 1.271(5) y N1 N2 . 1.384(4) y N2 C8 . 1.319(5) y N3 C8 . 1.327(5) y N4 C16 . 1.280(5) y N4 N5 . 1.389(4) y N5 C17 . 1.326(5) y N6 C17 . 1.318(5) y C1 C6 . 1.383(5) ? C1 C2 . 1.400(6) ? C1 C7 . 1.454(5) ? C2 C3 . 1.386(6) ? C3 C4 . 1.381(6) ? C4 C5 . 1.392(6) ? C5 C6 . 1.372(6) ? C10 C11 . 1.388(5) ? C10 C15 . 1.404(6) ? C10 C16 . 1.454(5) ? C11 C12 . 1.389(6) ? C12 C13 . 1.391(6) ? C13 C14 . 1.392(6) ? C14 C15 . 1.381(6) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N6 H6C S1 1_555 0.86 2.70 3.522(4) 160 yes N2 H2B S2 4_575 0.86 2.60 3.431(3) 162 yes N3 H3C I1 2_656 0.86 3.00 3.735(4) 144 yes N5 H5B I1 4_576 0.86 3.06 3.901(4) 167 yes N6 H6B O1 1_455 0.86 2.15 2.895(5) 144 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion S2 Cd1 S1 C8 59.59(13) I2 Cd1 S1 C8 177.55(13) I1 Cd1 S1 C8 -54.41(13) S1 Cd1 S2 C17 65.16(13) I2 Cd1 S2 C17 -51.45(13) I1 Cd1 S2 C17 179.42(13) C7 N1 N2 C8 167.5(4) C16 N4 N5 C17 -170.1(4) C6 C1 C2 C3 -1.8(7) C7 C1 C2 C3 174.0(4) C1 C2 C3 C4 -0.7(7) C9 O1 C4 C3 -2.2(8) C9 O1 C4 C5 177.0(5) C2 C3 C4 O1 -178.0(5) C2 C3 C4 C5 2.9(7) O1 C4 C5 C6 178.3(4) C3 C4 C5 C6 -2.5(7) C4 C5 C6 C1 -0.2(7) C2 C1 C6 C5 2.3(7) C7 C1 C6 C5 -173.5(4) N2 N1 C7 C1 -177.9(4) C6 C1 C7 N1 157.4(4) C2 C1 C7 N1 -18.3(6) N1 N2 C8 N3 2.8(5) N1 N2 C8 S1 -178.5(3) Cd1 S1 C8 N2 80.5(3) Cd1 S1 C8 N3 -100.8(3) C15 C10 C11 C12 -0.6(6) C16 C10 C11 C12 176.5(4) C10 C11 C12 C13 0.0(6) C18 O2 C13 C12 10.4(7) C18 O2 C13 C14 -170.8(5) C11 C12 C13 O2 -179.5(4) C11 C12 C13 C14 1.8(7) O2 C13 C14 C15 178.1(4) C12 C13 C14 C15 -3.1(7) C13 C14 C15 C10 2.5(7) C11 C10 C15 C14 -0.7(7) C16 C10 C15 C14 -177.9(4) N5 N4 C16 C10 -178.8(3) C11 C10 C16 N4 14.6(6) C15 C10 C16 N4 -168.3(4) N4 N5 C17 N6 -1.8(5) N4 N5 C17 S2 175.4(3) Cd1 S2 C17 N6 -27.6(3) Cd1 S2 C17 N5 155.4(3)