#------------------------------------------------------------------------------ #$Date: 2016-02-19 14:29:56 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176759 $ #$URL: svn://www.crystallography.net/cod/cif/2/00/91/2009137.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2009137 loop_ _publ_author_name 'Hubin, Timothy J.' 'Tyryshkin, Nickolay ' 'Alcock, Nathaniel W.' 'Busch, Daryle H.' _publ_section_title ; An o-xylyl cross-bridged 5,12-dioxocyclam ; _journal_issue 11 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1888 _journal_page_last 1889 _journal_paper_doi 10.1107/S0108270199008835 _journal_volume 55 _journal_year 1999 _chemical_formula_iupac 'C18 H26 N4 O2 , H2 O' _chemical_formula_sum 'C18 H28 N4 O3' _chemical_formula_weight 348.44 _chemical_name_systematic ; 1,10,13,18-tetraazatetracyclo[8.6.6.0^3,8^]docasa-3,5,7-triene-11,17-dione monohydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _audit_creation_method SHELXL _cell_angle_alpha 90.00 _cell_angle_beta 101.983(5) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 9.9190(10) _cell_length_b 12.898(2) _cell_length_c 14.045(2) _cell_measurement_reflns_used 5802 _cell_measurement_temperature 220(2) _cell_measurement_theta_max 20 _cell_measurement_theta_min 3 _cell_volume 1757.7(4) _computing_cell_refinement 'SAINT (Siemens, 1995)' _computing_data_collection 'SMART (Siemens, 1994)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 220(2) _diffrn_detector_area_resol_mean 8.192 _diffrn_measurement_device_type 'Siemens SMART' _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'normal-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.021 _diffrn_reflns_av_sigmaI/netI 0.033 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min -13 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 18 _diffrn_reflns_limit_l_min -17 _diffrn_reflns_number 10113 _diffrn_reflns_theta_max 28.48 _diffrn_reflns_theta_min 2.63 _diffrn_standards_decay_% none _exptl_absorpt_coefficient_mu 0.091 _exptl_absorpt_correction_T_max 0.96 _exptl_absorpt_correction_T_min 0.77 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.317 _exptl_crystal_density_method 'not measured' _exptl_crystal_description blocks _exptl_crystal_F_000 752 _exptl_crystal_size_max 0.5 _exptl_crystal_size_mid 0.5 _exptl_crystal_size_min 0.4 _refine_diff_density_max 0.655 _refine_diff_density_min -0.338 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.061 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 234 _refine_ls_number_reflns 4114 _refine_ls_number_restraints 0 _refine_ls_R_factor_all 0.071 _refine_ls_R_factor_gt 0.047 _refine_ls_shift/su_max 0.014 _refine_ls_shift/su_mean 0.001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0708P)^2^+0.3237P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_obs .124 _refine_ls_wR_factor_ref 0.137 _reflns_number_gt 2954 _reflns_number_total 4114 _reflns_observed_criterion I>2\s(I) _cod_data_source_file ha1263.cif _cod_data_source_block tyr11 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0708P)^2^+0.3237P] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0708P)^2^+0.3237P] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2009137 _cod_database_fobs_code 2009137 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, y+1/2, -z+1/2' '-x, -y, -z' 'x-1/2, -y-1/2, z-1/2' loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 .0373(8) .0352(8) .0322(7) -.0038(6) .0151(6) -.0085(6) C2 .0400(9) .0290(8) .0206(7) .0068(7) .0045(6) .0009(6) O3 .0552(8) .0433(8) .0272(6) .0075(6) .0131(6) -.0049(5) C4 .0424(9) .0275(9) .0294(8) -.0009(7) .0030(7) -.0068(7) C5 .0331(8) .0237(8) .0309(8) -.0014(6) .0050(6) -.0004(6) N6 .0260(6) .0259(7) .0248(6) .0006(5) .0024(5) -.0019(5) C7 .0259(8) .0322(9) .0349(9) -.0030(7) .0012(7) -.0010(7) C8 .0276(8) .0349(9) .0340(9) .0036(7) .0039(7) -.0002(7) N9 .0390(8) .0291(7) .0262(7) .0008(6) .0057(6) -.0023(6) C10 .0361(9) .0246(8) .0299(8) .0080(7) .0029(7) .0006(6) O11 .0422(7) .0403(7) .0323(6) .0036(6) .0079(5) -.0105(5) C12 .0443(10) .0293(9) .0344(9) -.0022(7) .0057(8) .0050(7) C13 .0368(9) .0305(9) .0371(9) -.0073(7) .0070(7) .0012(7) N14 .0301(7) .0287(7) .0269(7) -.0017(6) .0055(5) .0007(5) C15 .0282(8) .0406(10) .0329(8) -.0028(7) .0076(7) -.0014(7) C16 .0388(9) .0421(10) .0318(9) -.0059(8) .0142(7) -.0033(7) C17 .0390(9) .0334(9) .0261(8) .0001(7) .0060(7) -.0036(7) C18 .0331(8) .0343(9) .0208(7) .0039(7) .0076(6) -.0016(6) C19 .0312(9) .0459(11) .0280(8) .0026(7) .0058(7) -.0014(7) C20 .0372(9) .0499(11) .0296(9) .0142(8) .0055(7) .0050(8) C21 .0502(10) .0360(10) .0283(8) .0127(8) .0134(8) .0063(7) C22 .0414(9) .0357(9) .0252(8) .0010(7) .0110(7) -.0010(7) C23 .0314(8) .0349(9) .0195(7) .0051(7) .0080(6) -.0012(6) C24 .0305(8) .0405(10) .0256(8) .0028(7) .0085(6) -.0014(7) O001 .159(2) .0668(13) .0692(12) .0377(13) -.0435(13) -.0263(10) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_thermal_displace_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_group _atom_site_type_symbol N1 .86843(15) .48592(11) .85920(10) .0338(3) Uani d . 1 . N H1A .922(2) .4684(15) .8209(15) .040(5) Uiso d . 1 . H C2 .90147(17) .57015(13) .91285(11) .0301(4) Uani d . 1 . C O3 .83270(14) .60317(10) .97098(8) .0412(3) Uani d . 1 . O C4 1.03040(18) .62455(13) .89868(12) .0338(4) Uani d . 1 . C H4A 1.1092 .5939 .9436 .041 Uiso calc R 1 . H H4B 1.0246 .6974 .9174 .041 Uiso calc R 1 . H C5 1.06006(17) .62131(12) .79568(12) .0295(4) Uani d . 1 . C H5A .9799 .6484 .7495 .035 Uiso calc R 1 . H H5B 1.1386 .6666 .7932 .035 Uiso calc R 1 . H N6 1.09084(13) .51606(10) .76535(9) .0260(3) Uani d . 1 . N C7 1.23491(16) .48933(13) .81010(12) .0317(4) Uani d . 1 . C H7A 1.2526 .5086 .8791 .038 Uiso calc R 1 . H H7B 1.2965 .5307 .7789 .038 Uiso calc R 1 . H C8 1.27019(16) .37535(13) .80229(12) .0325(4) Uani d . 1 . C H8A 1.2689 .3580 .7342 .039 Uiso calc R 1 . H H8B 1.3632 .3621 .8402 .039 Uiso calc R 1 . H N9 1.17206(15) .31054(11) .83823(10) .0316(3) Uani d . 1 . N H9A 1.155(2) .3282(16) .8935(15) .039(5) Uiso d . 1 . H C10 1.08598(17) .24684(12) .78037(12) .0308(4) Uani d . 1 . C O11 1.10119(13) .22170(10) .69823(9) .0383(3) Uani d . 1 . O C12 .96406(18) .20810(14) .81961(13) .0364(4) Uani d . 1 . C H12A .9612 .2433 .8810 .044 Uiso calc R 1 . H H12B .9733 .1335 .8323 .044 Uiso calc R 1 . H C13 .83121(18) .22976(14) .74520(13) .0349(4) Uani d . 1 . C H13A .8299 .1869 .6874 .042 Uiso calc R 1 . H H13B .7523 .2094 .7730 .042 Uiso calc R 1 . H N14 .81576(13) .33959(11) .71550(9) .0286(3) Uani d . 1 . N C15 .70018(17) .39080(14) .74598(12) .0337(4) Uani d . 1 . C H15A .6222 .3428 .7391 .040 Uiso calc R 1 . H H15B .6708 .4510 .7042 .040 Uiso calc R 1 . H C16 .74287(18) .42565(15) .85151(12) .0366(4) Uani d . 1 . C H16A .6702 .4681 .8697 .044 Uiso calc R 1 . H H16B .7595 .3654 .8949 .044 Uiso calc R 1 . H C17 .81887(18) .35328(14) .61152(11) .0330(4) Uani d . 1 . C H17A .7400 .3166 .5723 .040 Uiso calc R 1 . H H17B .9029 .3210 .5989 .040 Uiso calc R 1 . H C18 .81464(16) .46544(13) .57850(11) .0291(4) Uani d . 1 . C C19 .69335(17) .50007(15) .51754(12) .0351(4) Uani d . 1 . C H19A .6178 .4546 .5026 .042 Uiso calc R 1 . H C20 .68053(19) .59877(15) .47846(12) .0391(4) Uani d . 1 . C H20A .5974 .6197 .4377 .047 Uiso calc R 1 . H C21 .79075(19) .66661(14) .49961(12) .0374(4) Uani d . 1 . C H21A .7834 .7340 .4737 .045 Uiso calc R 1 . H C22 .91217(18) .63363(14) .55967(12) .0335(4) Uani d . 1 . C H22A .9872 .6797 .5735 .040 Uiso calc R 1 . H C23 .92711(16) .53425(13) .60041(11) .0282(3) Uani d . 1 . C C24 1.06821(17) .50405(14) .65832(11) .0318(4) Uani d . 1 . C H24A 1.0849 .4314 .6440 .038 Uiso calc R 1 . H H24B 1.1374 .5458 .6351 .038 Uiso calc R 1 . H O001 .9949(3) .11321(16) .52164(14) .1081(9) Uani d . 1 . O loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C2 N1 C16 126.04(15) O3 C2 N1 123.39(16) O3 C2 C4 121.58(15) N1 C2 C4 115.04(14) C2 C4 C5 116.45(13) N6 C5 C4 112.91(13) C5 N6 C7 109.40(12) C5 N6 C24 113.13(12) C7 N6 C24 109.68(12) N6 C7 C8 114.32(13) N9 C8 C7 110.54(13) C10 N9 C8 122.29(14) O11 C10 N9 122.91(16) O11 C10 C12 120.94(15) N9 C10 C12 116.13(15) C10 C12 C13 109.35(14) N14 C13 C12 113.14(14) C15 N14 C13 113.11(13) C15 N14 C17 114.45(13) C13 N14 C17 111.83(13) N14 C15 C16 110.00(13) N1 C16 C15 106.93(13) N14 C17 C18 114.28(13) C19 C18 C23 118.33(16) C19 C18 C17 117.25(15) C23 C18 C17 124.30(14) C20 C19 C18 122.31(17) C19 C20 C21 119.60(16) C20 C21 C22 118.98(17) C21 C22 C23 122.34(17) C22 C23 C18 118.43(15) C22 C23 C24 117.53(15) C18 C23 C24 123.80(15) N6 C24 C23 116.49(12) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.324(2) ? N1 C16 . 1.453(2) ? C2 O3 . 1.2428(19) ? C2 C4 . 1.508(2) ? C4 C5 . 1.535(2) ? C5 N6 . 1.474(2) ? N6 C7 . 1.477(2) ? N6 C24 . 1.4812(19) ? C7 C8 . 1.520(2) ? C8 N9 . 1.451(2) ? N9 C10 . 1.333(2) ? C10 O11 . 1.2372(19) ? C10 C12 . 1.514(2) ? C12 C13 . 1.528(2) ? C13 N14 . 1.476(2) ? N14 C15 . 1.462(2) ? N14 C17 . 1.478(2) ? C15 C16 . 1.522(2) ? C17 C18 . 1.517(2) ? C18 C19 . 1.397(2) ? C18 C23 . 1.409(2) ? C19 C20 . 1.382(3) ? C20 C21 . 1.384(3) ? C21 C22 . 1.386(2) ? C22 C23 . 1.399(2) ? C23 C24 . 1.516(2) ?