#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2011064.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011064 loop_ _publ_author_name 'Goswami, Shyamaprosad' 'Mukherjee, Reshmi' 'Ghosh, Kumaresh' 'Razak, Ibrahim Abdul' 'Shanmuga Sundara Raj, S.' 'Fun, Hoong-Kun' _publ_section_title ; Self-assembly of 2-pivaloyl-6-chloropterin ; _journal_issue 6 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 716 _journal_page_last 717 _journal_volume 56 _journal_year 2000 _chemical_formula_sum 'C11 H12 Cl N5 O2' _chemical_formula_weight 281.71 _chemical_name_systematic ; Self-assembly of 2-pivaloylchloropterin ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 108.9810(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.5984(5) _cell_length_b 9.6927(3) _cell_length_c 10.3211(4) _cell_measurement_reflns_used 4762 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 28.32 _cell_measurement_theta_min 1.58 _cell_volume 1286.41(8) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_molecular_graphics SHELXTL _computing_publication_material ; SHELXTL, PARST (Nardelli, 1995) and PLATON (Spek, 1990) ; _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measurement_device_type ; Siemens SMART CCD area detector diffractometer ; _diffrn_measurement_method '\w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .053 _diffrn_reflns_av_sigmaI/netI .057 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 13 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 8666 _diffrn_reflns_theta_max 28.28 _diffrn_reflns_theta_min 1.58 _exptl_absorpt_coefficient_mu .303 _exptl_absorpt_correction_T_max .965 _exptl_absorpt_correction_T_min .888 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.455 _exptl_crystal_density_method 'not measured' _exptl_crystal_description slab _exptl_crystal_F_000 584 _exptl_crystal_size_max .40 _exptl_crystal_size_mid .22 _exptl_crystal_size_min .12 _refine_diff_density_max .28 _refine_diff_density_min -.48 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.07 _refine_ls_hydrogen_treatment 'see text' _refine_ls_matrix_type full _refine_ls_number_parameters 212 _refine_ls_number_reflns 3166 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.07 _refine_ls_R_factor_all .083 _refine_ls_R_factor_gt .055 _refine_ls_shift/su_max .00 _refine_ls_shift/su_mean .00 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0678P)^2^+0.4544P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .157 _reflns_number_gt 2235 _reflns_number_total 3166 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file sk1368.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2011064 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z+1/2' '-x, -y, -z' 'x, -y-1/2, z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Cl1 .48778(6) .16549(7) .56281(8) .0611(3) Uani d . 1 . . Cl O1 .29682(17) .50635(19) .16373(17) .0563(5) Uani d . 1 . . O O2 .12292(16) .8864(2) .15638(18) .0561(5) Uani d . 1 . . O N1 .36239(19) .5055(2) .6463(2) .0507(6) Uani d . 1 . . N N2 .39060(15) .37396(19) .41777(19) .0375(4) Uani d . 1 . . N N3 .26010(15) .69070(19) .27530(19) .0344(4) Uani d . 1 . . N N4 .28587(15) .69374(19) .51307(18) .0370(4) Uani d . 1 . . N N5 .21390(16) .88258(19) .3825(2) .0361(4) Uani d . 1 . . N C1 .4078(2) .3849(3) .6550(3) .0504(7) Uani d . 1 . . C C2 .42308(18) .3219(2) .5411(2) .0395(5) Uani d . 1 . . C C3 .34195(17) .4972(2) .4075(2) .0329(5) Uani d . 1 . . C C4 .29945(18) .5599(2) .2714(2) .0358(5) Uani d . 1 . . C C5 .25472(15) .7509(2) .3922(2) .0313(4) Uani d . 1 . . C C6 .33019(17) .5659(2) .5208(2) .0349(5) Uani d . 1 . . C C7 .14683(17) .9436(2) .2662(2) .0365(5) Uani d . 1 A . C C8 .1032(2) 1.0845(3) .2850(3) .0475(6) Uani d . 1 . . C C9A .0400(5) 1.0619(6) .3915(7) .0682(18) Uani d P .594(7) A 1 C H9AA -.0154 .9973 .3537 .102 Uiso calc PR .594(7) A 1 H H9AB .0117 1.1484 .4077 .102 Uiso calc PR .594(7) A 1 H H9AC .0863 1.0266 .4763 .102 Uiso calc PR .594(7) A 1 H C10A .1867(5) 1.1842(5) .3492(8) .0688(19) Uani d P .594(7) A 1 C H10A .2334 1.1455 .4320 .103 Uiso calc PR .594(7) A 1 H H10B .1568 1.2675 .3704 .103 Uiso calc PR .594(7) A 1 H H10C .2241 1.2047 .2871 .103 Uiso calc PR .594(7) A 1 H C11A .0244(6) 1.1321(6) .1543(6) .080(2) Uani d P .594(7) A 1 C H11A -.0267 1.0612 .1197 .119 Uiso calc PR .594(7) A 1 H H11B .0584 1.1514 .0880 .119 Uiso calc PR .594(7) A 1 H H11C -.0089 1.2142 .1713 .119 Uiso calc PR .594(7) A 1 H C9B -.0100(7) 1.0752(11) .2354(15) .096(4) Uani d P .406(7) A 2 C H9BA -.0324 1.0313 .1472 .144 Uiso calc PR .406(7) A 2 H H9BB -.0392 1.1662 .2276 .144 Uiso calc PR .406(7) A 2 H H9BC -.0329 1.0220 .2986 .144 Uiso calc PR .406(7) A 2 H C10B .1468(10) 1.1506(9) .4207(9) .077(3) Uani d P .406(7) A 2 C H10D .2212 1.1530 .4463 .116 Uiso calc PR .406(7) A 2 H H10E .1268 1.0989 .4874 .116 Uiso calc PR .406(7) A 2 H H10F .1205 1.2431 .4164 .116 Uiso calc PR .406(7) A 2 H C11B .1384(12) 1.1816(9) .1780(12) .103(5) Uani d P .406(7) A 2 C H11D .2128 1.1894 .2084 .155 Uiso calc PR .406(7) A 2 H H11E .1082 1.2716 .1745 .155 Uiso calc PR .406(7) A 2 H H11F .1148 1.1408 .0884 .155 Uiso calc PR .406(7) A 2 H H1N5 .225(2) .918(3) .460(3) .045(7) Uiso d . 1 . . H H1N3 .248(2) .732(4) .203(3) .067(10) Uiso d . 1 . . H H1 .425(2) .341(3) .731(3) .066(10) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Cl1 .0659(5) .0469(4) .0690(5) .0210(3) .0199(4) .0211(3) O1 .0991(15) .0432(10) .0248(9) .0188(10) .0176(9) -.0010(7) O2 .0754(13) .0499(11) .0306(9) .0191(9) .0003(8) -.0045(8) N1 .0728(15) .0518(13) .0240(10) .0103(11) .0110(10) .0078(9) N2 .0458(11) .0324(10) .0329(10) .0033(8) .0110(8) .0045(7) N3 .0529(11) .0310(9) .0194(9) .0042(8) .0119(8) .0018(7) N4 .0542(11) .0357(10) .0225(9) .0019(8) .0142(8) -.0003(7) N5 .0527(11) .0302(9) .0242(9) .0037(8) .0111(8) -.0017(7) C1 .0641(16) .0528(16) .0302(13) .0102(13) .0097(11) .0145(11) C2 .0401(12) .0359(12) .0396(13) .0039(9) .0088(10) .0086(9) C3 .0405(11) .0316(11) .0257(11) -.0012(9) .0097(9) .0012(8) C4 .0496(13) .0339(11) .0240(11) .0021(9) .0119(9) .0007(8) C5 .0394(11) .0307(10) .0246(10) -.0025(9) .0114(8) -.0017(8) C6 .0435(12) .0381(12) .0212(10) .0023(9) .0080(8) .0036(8) C7 .0430(12) .0333(11) .0320(12) .0015(9) .0106(9) -.0001(9) C8 .0567(15) .0341(12) .0452(15) .0084(11) .0079(11) -.0024(10) C9A .079(4) .054(3) .081(4) .007(3) .039(3) -.008(3) C10A .074(4) .037(3) .088(5) -.007(2) .017(3) -.007(3) C11A .109(6) .056(4) .054(3) .039(4) .001(3) .000(3) C9B .063(5) .070(6) .150(13) .020(5) .028(6) -.016(7) C10B .126(8) .045(4) .060(5) .027(5) .030(5) -.005(4) C11B .192(13) .050(5) .102(8) .038(6) .095(9) .035(5) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cl Cl .1484 .1585 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C1 N1 C6 116.6(2) C2 N2 C3 114.82(19) C5 N3 C4 123.45(19) C5 N4 C6 116.12(18) C7 N5 C5 126.47(19) N1 C1 C2 121.8(2) N2 C2 C1 123.7(2) N2 C2 Cl1 117.48(19) C1 C2 Cl1 118.81(19) N2 C3 C6 122.7(2) N2 C3 C4 118.17(18) C6 C3 C4 119.1(2) O1 C4 N3 121.4(2) O1 C4 C3 125.7(2) N3 C4 C3 112.87(18) N4 C5 N3 124.8(2) N4 C5 N5 117.37(18) N3 C5 N5 117.82(18) N1 C6 N4 116.41(19) N1 C6 C3 120.2(2) N4 C6 C3 123.38(19) O2 C7 N5 121.2(2) O2 C7 C8 122.2(2) N5 C7 C8 116.6(2) C9B C8 C10A 140.2(5) C9B C8 C10B 114.3(7) C10A C8 C10B 43.6(5) C9B C8 C11A 48.6(6) C10A C8 C11A 115.1(4) C10B C8 C11A 132.0(4) C9B C8 C7 108.1(4) C10A C8 C7 111.7(3) C10B C8 C7 117.1(4) C11A C8 C7 110.8(3) C9B C8 C9A 59.8(6) C10A C8 C9A 106.5(4) C10B C8 C9A 63.4(6) C11A C8 C9A 105.8(4) C7 C8 C9A 106.3(3) C9B C8 C11B 107.8(8) C10A C8 C11B 64.8(6) C10B C8 C11B 105.9(7) C11A C8 C11B 59.7(6) C7 C8 C11B 102.6(4) C9A C8 C11B 150.9(4) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag Cl1 C2 1.730(2) ? O1 C4 1.217(3) yes O2 C7 1.208(3) ? N1 C1 1.312(3) yes N1 C6 1.358(3) yes N2 C2 1.306(3) yes N2 C3 1.352(3) yes N3 C5 1.363(3) yes N3 C4 1.381(3) yes N4 C5 1.303(3) yes N4 C6 1.369(3) yes N5 C7 1.382(3) ? N5 C5 1.382(3) ? C1 C2 1.399(4) yes C3 C6 1.400(3) yes C3 C4 1.466(3) yes C7 C8 1.526(3) ? C8 C9B 1.458(10) ? C8 C10A 1.474(6) ? C8 C10B 1.478(9) ? C8 C11A 1.497(6) ? C8 C9A 1.615(6) ? C8 C11B 1.636(9) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N3 H1N3 N4 4_575 .82(3) 2.30(3) 3.053(3) 154(3) yes N5 H1N5 O1 4_576 .84(3) 2.14(3) 2.954(3) 164(3) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C6 N1 C1 C2 .5(4) ? C3 N2 C2 C1 1.4(4) ? C3 N2 C2 Cl1 -179.09(16) ? N1 C1 C2 N2 -2.8(4) ? N1 C1 C2 Cl1 177.7(2) ? C2 N2 C3 C6 2.0(3) ? C2 N2 C3 C4 -177.6(2) ? C5 N3 C4 O1 175.2(2) ? C5 N3 C4 C3 -4.4(3) ? N2 C3 C4 O1 5.9(4) ? C6 C3 C4 O1 -173.7(2) ? N2 C3 C4 N3 -174.5(2) ? C6 C3 C4 N3 5.9(3) ? C6 N4 C5 N3 2.4(3) ? C6 N4 C5 N5 -177.18(19) ? C4 N3 C5 N4 .3(3) ? C4 N3 C5 N5 179.8(2) ? C7 N5 C5 N4 -156.9(2) ? C7 N5 C5 N3 23.5(3) ? C1 N1 C6 N4 -178.0(2) ? C1 N1 C6 C3 2.7(4) ? C5 N4 C6 N1 -179.7(2) ? C5 N4 C6 C3 -.4(3) ? N2 C3 C6 N1 -4.2(3) ? C4 C3 C6 N1 175.4(2) ? N2 C3 C6 N4 176.6(2) ? C4 C3 C6 N4 -3.9(3) ? C5 N5 C7 O2 -5.2(4) yes C5 N5 C7 C8 173.5(2) yes O2 C7 C8 C9B 55.7(7) ? N5 C7 C8 C9B -123.0(7) ? O2 C7 C8 C10A -125.7(4) ? N5 C7 C8 C10A 55.6(4) ? O2 C7 C8 C10B -173.6(6) ? N5 C7 C8 C10B 7.8(7) ? O2 C7 C8 C11A 4.0(5) ? N5 C7 C8 C11A -174.7(4) ? O2 C7 C8 C9A 118.5(3) ? N5 C7 C8 C9A -60.2(4) ? O2 C7 C8 C11B -58.1(6) ? N5 C7 C8 C11B 123.3(6) ?