#------------------------------------------------------------------------------ #$Date: 2025-08-19 07:12:48 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301798 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/11/2011163.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011163 loop_ _publ_author_name 'Shanmuga Sundara Raj, S.' 'Razak, Ibrahim Abdul' 'Fun, Hoong-Kun' 'Goswami, Shyamaprosad' 'Mukherjee, Reshmi' 'Adak, Avijit' _publ_section_title ; N-(6-Bromo-4-oxo-3,4-dihydropteridin-2-yl)-2,2-dimethylpropanamide ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e302 _journal_page_last e303 _journal_paper_doi 10.1107/S0108270100007861 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac 'C11 H12 Br N5 O2' _chemical_formula_moiety 'C11 H12 Br N5 O2' _chemical_formula_sum 'C11 H12 Br N5 O2' _chemical_formula_weight 326.17 _chemical_name_systematic ; N-(6-Bromo-4-oxo-3,4-dihydropteridin-2-yl)-2,2-dimethylpropanamide ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 106.2160(10) _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 13.43150(10) _cell_length_b 10.3779(2) _cell_length_c 10.2560(2) _cell_measurement_reflns_used 4433 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 28.32 _cell_measurement_theta_min 1.58 _cell_volume 1372.72(4) _computing_cell_refinement 'SAINT (Siemens, 1996)' _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction SAINT _computing_publication_material 'SHELXTL and PLATON (Spek, 1990)' _computing_structure_refinement SHELXTL _computing_structure_solution 'SHELXTL (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 8.33 _diffrn_measured_fraction_theta_full .983 _diffrn_measured_fraction_theta_max .983 _diffrn_measurement_device_type 'Siemens SMART CCD area-detector' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .067 _diffrn_reflns_av_sigmaI/netI .0785 _diffrn_reflns_limit_h_max 17 _diffrn_reflns_limit_h_min -17 _diffrn_reflns_limit_k_max 13 _diffrn_reflns_limit_k_min -13 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -13 _diffrn_reflns_number 9400 _diffrn_reflns_theta_full 28.22 _diffrn_reflns_theta_max 28.22 _diffrn_reflns_theta_min 1.58 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 3.000 _exptl_absorpt_correction_T_max .517 _exptl_absorpt_correction_T_min .381 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details '(SADABS; Sheldrick, 1996)' _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.578 _exptl_crystal_density_method 'not measured' _exptl_crystal_description slab _exptl_crystal_F_000 656 _exptl_crystal_size_max .36 _exptl_crystal_size_mid .26 _exptl_crystal_size_min .22 _refine_diff_density_max .759 _refine_diff_density_min -.914 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref .935 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 200 _refine_ls_number_reflns 3332 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .935 _refine_ls_R_factor_all .096 _refine_ls_R_factor_gt .054 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0873P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .128 _reflns_number_gt 1999 _reflns_number_total 3332 _reflns_threshold_expression I>2\s(I) _cod_data_source_file qa0311.cif _cod_data_source_block I _cod_original_sg_symbol_H-M 'P 21/c' _cod_database_code 2011163 _cod_database_fobs_code 2011163 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,1/2+y,1/2-z -x,-y,-z x,1/2-y,1/2+z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Br1 .48346(4) .19108(5) .57471(6) .0681(2) Uani d . 1 . . Br O1 .2784(3) .5192(3) .1540(2) .0566(8) Uani d . 1 . . O O2 .1154(2) .8877(3) .1507(3) .0544(8) Uani d . 1 . . O N1 .3595(3) .5396(3) .6380(3) .0462(8) Uani d . 1 . . N N2 .3757(3) .3971(4) .4093(4) .0568(9) Uani d . 1 . . N N3 .2455(2) .6974(3) .2649(3) .0331(7) Uani d . 1 . . N H3A .2230 .7383 .1894 .040 Uiso calc R 1 . . H N4 .2759(2) .7073(3) .5022(3) .0352(7) Uani d . 1 . . N N5 .2040(2) .8812(3) .3733(3) .0329(6) Uani d . 1 . . N H5A .2207 .9259 .4469 .040 Uiso calc R 1 . . H C1 .4061(3) .4259(4) .6502(4) .0472(10) Uani d . 1 . . C H1A .4342 .3934 .7373 .057 Uiso calc R 1 . . H C2 .4159(3) .3520(4) .5413(4) .0394(9) Uani d . 1 . . C C3 .3267(3) .5175(3) .3960(3) .0296(7) Uani d . 1 . . C C4 .2828(3) .5739(3) .2617(3) .0339(8) Uani d . 1 . . C C5 .2428(2) .7576(3) .3817(3) .0282(7) Uani d . 1 . . C C6 .3210(3) .5871(3) .5104(3) .0320(7) Uani d . 1 . . C C7 .1408(3) .9415(4) .2590(4) .0366(8) Uani d . 1 A . C C8 .1043(3) 1.0784(4) .2793(4) .0476(10) Uani d . 1 . . C C9A .0374(8) 1.0643(9) .3888(11) .069(4) Uani d P .524(12) A 1 C H9AA -.0170 1.0025 .3562 .103 Uiso calc PR .524(12) A 1 H H9AB .0077 1.1462 .4003 .103 Uiso calc PR .524(12) A 1 H H9AC .0820 1.0360 .4743 .103 Uiso calc PR .524(12) A 1 H C10A .1933(12) 1.1656(13) .3428(17) .072(4) Uani d P .524(12) A 1 C H10A .2372 1.1252 .4224 .108 Uiso calc PR .524(12) A 1 H H10B .1674 1.2454 .3677 .108 Uiso calc PR .524(12) A 1 H H10C .2323 1.1821 .2792 .108 Uiso calc PR .524(12) A 1 H C11A .0315(12) 1.1274(11) .1565(10) .083(5) Uani d P .524(12) A 1 C H11A -.0192 1.0623 .1188 .124 Uiso calc PR .524(12) A 1 H H11B .0682 1.1496 .0916 .124 Uiso calc PR .524(12) A 1 H H11C -.0026 1.2025 .1780 .124 Uiso calc PR .524(12) A 1 H C9B -.0072(10) 1.0720(14) .2468(18) .103(6) Uani d P .476(12) A 2 C H9BA -.0340 1.0290 .1613 .155 Uiso calc PR .476(12) A 2 H H9BB -.0350 1.1577 .2410 .155 Uiso calc PR .476(12) A 2 H H9BC -.0267 1.0251 .3165 .155 Uiso calc PR .476(12) A 2 H C10B .1625(18) 1.1444(15) .4029(17) .099(7) Uani d P .476(12) A 2 C H10D .2354 1.1374 .4119 .149 Uiso calc PR .476(12) A 2 H H10E .1474 1.1055 .4801 .149 Uiso calc PR .476(12) A 2 H H10F .1431 1.2337 .3977 .149 Uiso calc PR .476(12) A 2 H C11B .1296(18) 1.1592(11) .1537(16) .105(6) Uani d P .476(12) A 2 C H11D .2030 1.1733 .1737 .158 Uiso calc PR .476(12) A 2 H H11E .0944 1.2407 .1431 .158 Uiso calc PR .476(12) A 2 H H11F .1062 1.1106 .0711 .158 Uiso calc PR .476(12) A 2 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Br1 .0584(3) .0535(3) .0895(5) .0152(2) .0159(3) .0327(2) O1 .106(2) .0400(16) .0206(13) .0180(15) .0121(14) -.0003(11) O2 .0705(19) .0516(17) .0274(14) .0188(14) -.0088(13) -.0049(12) N1 .063(2) .049(2) .0204(15) .0008(16) .0022(15) .0081(13) N2 .060(2) .048(2) .060(2) .0016(17) .0115(19) .0118(17) N3 .0508(18) .0318(16) .0146(14) .0044(12) .0057(12) .0031(11) N4 .0521(18) .0367(17) .0166(14) .0020(13) .0095(13) .0012(11) N5 .0459(17) .0315(16) .0190(14) .0036(13) .0050(12) -.0057(11) C1 .052(2) .051(2) .029(2) .0004(18) -.0040(17) .0139(18) C2 .0335(19) .038(2) .043(2) .0010(15) .0034(16) .0170(16) C3 .0355(18) .0314(18) .0210(16) -.0010(13) .0064(14) .0019(13) C4 .049(2) .0324(18) .0176(16) .0024(15) .0045(14) .0005(13) C5 .0317(17) .0336(18) .0198(17) -.0027(14) .0077(13) -.0022(13) C6 .0373(18) .0361(19) .0221(16) -.0027(14) .0074(14) .0044(14) C7 .039(2) .041(2) .0260(18) .0040(15) .0037(15) -.0002(15) C8 .051(2) .038(2) .045(2) .0102(17) -.0005(19) -.0035(17) C9A .078(7) .059(6) .080(8) .020(5) .038(6) -.008(5) C10A .075(7) .036(6) .103(13) -.008(5) .021(8) -.012(7) C11A .128(12) .055(7) .047(6) .045(7) -.004(7) .000(5) C9B .078(9) .092(11) .139(19) .028(8) .030(10) -.006(10) C10B .16(2) .035(8) .082(12) .028(10) -.008(10) -.015(7) C11B .184(18) .048(7) .111(11) .033(9) .086(12) .038(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Br Br -.2901 2.4595 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C1 N1 C6 117.2(3) ? C2 N2 C3 116.0(3) ? C5 N3 C4 123.2(3) ? C5 N4 C6 116.7(3) ? C5 N5 C7 127.1(3) y N1 C1 C2 124.2(3) ? N2 C2 C1 119.9(3) ? N2 C2 Br1 120.7(3) ? C1 C2 Br1 119.4(3) ? C6 C3 N2 120.9(3) ? C6 C3 C4 118.8(3) ? N2 C3 C4 120.3(3) ? O1 C4 N3 121.6(3) ? O1 C4 C3 124.6(3) ? N3 C4 C3 113.8(3) ? N4 C5 N3 124.5(3) ? N4 C5 N5 117.1(3) ? N3 C5 N5 118.4(3) ? N1 C6 N4 115.4(3) ? N1 C6 C3 121.7(3) ? N4 C6 C3 122.8(3) ? O2 C7 N5 121.2(3) y O2 C7 C8 122.4(3) y N5 C7 C8 116.4(3) y C9B C8 C11A 54.0(8) ? C9B C8 C10B 119.5(11) ? C11A C8 C10B 131.0(8) ? C9B C8 C10A 141.3(8) ? C11A C8 C10A 115.4(9) ? C10B C8 C10A 33.8(8) ? C9B C8 C7 106.0(6) ? C11A C8 C7 111.6(5) ? C10B C8 C7 115.9(7) ? C10A C8 C7 111.8(6) ? C9B C8 C9A 54.4(7) ? C11A C8 C9A 105.2(8) ? C10B C8 C9A 73.1(10) ? C10A C8 C9A 106.4(7) ? C7 C8 C9A 105.6(4) ? C9B C8 C11B 105.7(11) ? C11A C8 C11B 51.8(8) ? C10B C8 C11B 105.2(10) ? C10A C8 C11B 73.7(9) ? C7 C8 C11B 102.8(5) ? C9A C8 C11B 149.0(7) ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Br1 C2 . 1.886(4) y O1 C4 . 1.228(4) y O2 C7 . 1.204(4) y N1 C1 . 1.325(5) y N1 C6 . 1.358(4) y N2 C2 . 1.391(5) y N2 C3 . 1.401(5) y N3 C5 . 1.361(4) y N3 C4 . 1.379(4) y N4 C5 . 1.301(4) y N4 C6 . 1.380(4) y N5 C5 . 1.378(4) y N5 C7 . 1.390(4) y C1 C2 . 1.391(6) ? C3 C6 . 1.398(4) ? C3 C4 . 1.461(4) ? C7 C8 . 1.536(5) ? C8 C9B . 1.441(13) ? C8 C11A . 1.453(9) ? C8 C10B . 1.461(18) ? C8 C10A . 1.496(15) ? C8 C9A . 1.629(10) ? C8 C11B . 1.651(12) ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N3 H3A O2 1_555 .86 2.08 2.680(4) 126 yes N3 H3A N4 4_564 .86 2.30 3.003(4) 140 yes N5 H5A O1 4_565 .86 2.13 2.958(4) 163 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion C6 N1 C1 C2 -1.5(6) C3 N2 C2 C1 -.1(5) C3 N2 C2 Br1 179.8(3) N1 C1 C2 N2 .4(6) N1 C1 C2 Br1 -179.4(3) C2 N2 C3 C6 .9(5) C2 N2 C3 C4 179.4(3) C5 N3 C4 O1 175.4(3) C5 N3 C4 C3 -4.7(5) C6 C3 C4 O1 -176.0(4) N2 C3 C4 O1 5.5(6) C6 C3 C4 N3 4.1(5) N2 C3 C4 N3 -174.4(3) C6 N4 C5 N3 3.2(5) C6 N4 C5 N5 -175.7(3) C4 N3 C5 N4 1.1(5) C4 N3 C5 N5 180.0(3) C7 N5 C5 N4 -161.7(3) C7 N5 C5 N3 19.4(5) C1 N1 C6 N4 -178.1(3) C1 N1 C6 C3 2.3(5) C5 N4 C6 N1 176.9(3) C5 N4 C6 C3 -3.5(5) N2 C3 C6 N1 -2.1(5) C4 C3 C6 N1 179.4(3) N2 C3 C6 N4 178.3(3) C4 C3 C6 N4 -.2(5) C5 N5 C7 O2 -1.9(6) C5 N5 C7 C8 177.3(3) O2 C7 C8 C9B 61.3(9) N5 C7 C8 C9B -117.8(8) O2 C7 C8 C11A 4.2(9) N5 C7 C8 C11A -174.8(8) O2 C7 C8 C10B -163.5(11) N5 C7 C8 C10B 17.4(11) O2 C7 C8 C10A -126.7(7) N5 C7 C8 C10A 54.2(8) O2 C7 C8 C9A 118.0(6) N5 C7 C8 C9A -61.1(6) O2 C7 C8 C11B -49.4(9) N5 C7 C8 C11B 131.5(9) loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 PubChem 139057830