#------------------------------------------------------------------------------ #$Date: 2025-08-19 07:12:48 +0100 (Tue, 19 Aug 2025) $ #$Revision: 301798 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/11/2011185.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011185 loop_ _publ_author_name 'Antoli\'c, Snje\H-Pyrrolo[2,3-b]pyridine-3-acetic acid as a molecular probe for use in auxin physiology ; _journal_issue 8 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1026 _journal_page_last 1027 _journal_paper_doi 10.1107/S0108270100007101 _journal_volume 56 _journal_year 2000 _chemical_formula_moiety 'C9 H8 N2 O2' _chemical_formula_sum 'C9 H8 N2 O2' _chemical_formula_weight 176.17 _chemical_name_common 7-aza-IAA _chemical_name_systematic ; 7-azaindole-3-acetic acid ; _space_group_IT_number 33 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2c -2n' _symmetry_space_group_name_H-M 'P n a 21' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 14.9965(7) _cell_length_b 4.2170(3) _cell_length_c 26.0220(10) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 19 _cell_measurement_theta_min 11 _cell_volume 1645.64(15) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'HELENA (Spek, 1997a)' _computing_molecular_graphics 'PLATON97 (Spek, 1997b) and ORTEP (Johnson, 1965)' _computing_publication_material SHELXL97 _computing_structure_refinement SHELXL97 _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .921 _diffrn_measured_fraction_theta_max .921 _diffrn_measurement_device_type 'Enraf-Nonius CAD4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents .017 _diffrn_reflns_av_sigmaI/netI .063 _diffrn_reflns_limit_h_max 0 _diffrn_reflns_limit_h_min -18 _diffrn_reflns_limit_k_max 0 _diffrn_reflns_limit_k_min -5 _diffrn_reflns_limit_l_max 32 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 1762 _diffrn_reflns_theta_full 74.21 _diffrn_reflns_theta_max 74.21 _diffrn_reflns_theta_min 3.40 _diffrn_standards_decay_% .8 _diffrn_standards_interval_count 87 _diffrn_standards_interval_time 180 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .860 _exptl_absorpt_correction_T_max .95 _exptl_absorpt_correction_T_min .88 _exptl_absorpt_correction_type \y-scan _exptl_absorpt_process_details '(PLATON97; Spek, 1997b)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.42220(10) _exptl_crystal_density_meas ? _exptl_crystal_density_method 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 736 _exptl_crystal_size_max .15 _exptl_crystal_size_mid .08 _exptl_crystal_size_min .06 _refine_diff_density_max .15 _refine_diff_density_min -.20 _refine_ls_abs_structure_details 'Flack (1983)' _refine_ls_abs_structure_Flack .0(5) _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref .908 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 237 _refine_ls_number_reflns 1584 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .907 _refine_ls_R_factor_all .106 _refine_ls_R_factor_gt .041 _refine_ls_shift/su_max .001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)+(0.0508P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .104 _reflns_number_gt 992 _reflns_number_total 1584 _reflns_threshold_expression I>2\s(I) _cod_data_source_file av1034.cif _cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana The following automatic conversions were performed: '_exptl_crystal_density_meas' value 'not measured' was changed to '?' - the value is perceived as not measured. Automatic conversion script Id: cif_fix_values 3008 2015-01-20 13:52:24Z robertas The following automatic conversions were performed: '_refine_ls_weighting_scheme' value 'calc w = 1/[\s^2^(Fo^2^)+(0.0508P)^2^] where P=(Fo^2^+2Fc^2^)/3' was changed to 'calc'. New tag '_refine_ls_weighting_details' was created. The value of the new tag was set to 'w = 1/[\s^2^(Fo^2^)+(0.0508P)^2^] where P=(Fo^2^+2Fc^2^)/3'. Automatic conversion script Id: cif_fix_values 3143 2015-03-26 13:38:13Z robertas ; _cod_database_code 2011185 _cod_database_fobs_code 2011185 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,1/2+z 1/2+x,1/2-y,z 1/2-x,1/2+y,1/2+z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol C31 .4789(3) .3875(10) .21329(16) .0393(10) Uani d . 1 . . C C4 .4889(3) .2704(12) .1642(2) .0530(12) Uani d . 1 . . C H4 .5378 .1463 .1554 .064 Uiso calc R 1 . . H C5 .4242(4) .3427(13) .1286(2) .0572(13) Uani d . 1 . . C H5 .4290 .2653 .0952 .069 Uiso calc R 1 . . H C6 .3523(4) .5297(13) .1421(2) .0543(12) Uani d . 1 . . C H6 .3105 .5774 .1168 .065 Uiso calc R 1 . . H N2 .3391(2) .6469(9) .18957(15) .0455(10) Uani d . 1 . . N C71 .4026(3) .5737(11) .22313(17) .0411(11) Uani d . 1 . . C N1 .4037(2) .6671(9) .27306(15) .0457(10) Uani d . 1 . . N H1 .3643 .7826 .2880 .055 Uiso calc R 1 . . H C2 .4794(3) .5436(11) .29547(19) .0465(12) Uani d . 1 . . C H2 .4959 .5751 .3295 .056 Uiso calc R 1 . . H C3 .5266(3) .3688(11) .26079(17) .0416(11) Uani d . 1 . . C C8 .6128(3) .2005(11) .2706(2) .0506(12) Uani d . 1 . . C H8A .6145 .0094 .2499 .061 Uiso calc R 1 . . H H8B .6149 .1370 .3064 .061 Uiso calc R 1 . . H C9 .6942(3) .3968(11) .2588(2) .0452(11) Uani d . 1 . . C O1 .6991(2) .4892(9) .21113(13) .0564(8) Uani d . 1 . . O H1A .7454 .5890 .2068 .085 Uiso calc R 1 . . H O2 .7487(2) .4621(10) .29103(15) .0698(11) Uani d . 1 . . O C312 .2850(3) .5514(9) .48132(17) .0392(11) Uani d . 1 . . C C42 .2689(3) .6192(12) .53230(19) .0509(12) Uani d . 1 . . C H42 .2196 .7395 .5418 .061 Uiso calc R 1 . . H C52 .3270(4) .5062(14) .56906(19) .0604(13) Uani d . 1 . . C H52 .3167 .5465 .6037 .072 Uiso calc R 1 . . H C62 .4005(3) .3331(13) .55409(19) .0583(14) Uani d . 1 . . C H62 .4391 .2620 .5796 .070 Uiso calc R 1 . . H N22 .4198(2) .2607(9) .50541(16) .0465(10) Uani d . 1 . . N C712 .3619(3) .3718(10) .47085(17) .0418(11) Uani d . 1 . . C N12 .3675(2) .3284(9) .41905(14) .0453(10) Uani d . 1 . . N H12 .4085 .2252 .4031 .054 Uiso calc R 1 . . H C22 .2964(3) .4773(12) .39685(19) .0459(11) Uani d . 1 . . C H22 .2851 .4811 .3617 .055 Uiso calc R 1 . . H C32 .2444(3) .6189(11) .43277(18) .0419(11) Uani d . 1 . . C C82 .1614(3) .8106(11) .4237(2) .0531(14) Uani d . 1 . . C H82A .1606 .8830 .3883 .064 Uiso calc R 1 . . H H82B .1624 .9962 .4457 .064 Uiso calc R 1 . . H C92 .0772(3) .6229(11) .4343(2) .0475(12) Uani d . 1 . . C O12 .0647(2) .5692(9) .48320(13) .0657(11) Uani d . 1 . . O H12A .0190 .4648 .4871 .099 Uiso calc R 1 . . H O22 .0288(2) .5275(9) .40090(14) .0687(11) Uani d . 1 . . O loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 C31 .039(2) .034(2) .045(3) -.0079(18) .001(2) -.003(2) C4 .045(3) .053(3) .061(3) -.001(2) .005(3) -.014(2) C5 .059(3) .067(4) .045(3) .000(3) .001(3) -.016(2) C6 .048(3) .070(3) .045(3) -.005(2) -.007(2) -.006(2) N2 .039(2) .054(2) .044(2) -.0074(17) .000(2) -.0017(18) C71 .030(2) .053(3) .040(3) -.0080(18) .003(2) .003(2) N1 .037(2) .056(2) .043(2) .0008(17) .0074(18) -.0082(18) C2 .038(3) .054(3) .047(3) -.010(2) .000(2) -.003(2) C3 .035(2) .043(2) .046(3) -.0046(19) -.003(2) .000(2) C8 .050(3) .047(3) .055(3) -.004(2) -.007(3) .011(2) C9 .037(2) .048(3) .051(3) .005(2) .000(2) .007(2) O1 .047(2) .075(2) .0473(19) -.0084(18) -.0003(17) .0083(18) O2 .0544(19) .093(3) .062(3) -.020(2) -.008(2) .021(2) C312 .034(2) .040(2) .043(2) -.0109(18) .004(2) -.003(2) C42 .049(3) .057(3) .046(3) -.002(2) .009(3) -.007(2) C52 .061(3) .082(4) .037(3) -.008(3) .005(3) -.008(3) C62 .055(3) .074(4) .045(3) -.006(3) -.006(3) .004(2) N22 .039(2) .053(2) .048(2) -.0030(18) -.002(2) .0031(19) C712 .035(3) .047(2) .043(3) -.007(2) .006(2) .000(2) N12 .0333(19) .061(3) .041(2) .0004(17) .0042(19) -.0053(18) C22 .044(3) .056(3) .037(2) -.007(2) .003(2) .000(2) C32 .040(2) .039(2) .047(3) -.0101(19) .002(2) .003(2) C82 .046(3) .042(3) .072(4) .001(2) -.004(3) .008(2) C92 .040(3) .043(2) .060(4) .009(2) .002(3) .007(2) O12 .048(2) .093(3) .056(2) -.0171(19) .0004(19) -.007(2) O22 .056(2) .096(3) .054(2) -.019(2) -.008(2) .013(2) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0181 .0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0311 .0180 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0492 .0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C4 C31 C71 117.2(4) yes C4 C31 C3 136.6(4) yes C71 C31 C3 106.2(4) yes C5 C4 C31 117.9(5) yes C4 C5 C6 120.4(5) yes N2 C6 C5 123.9(5) yes C71 N2 C6 114.3(4) yes N2 C71 N1 124.8(4) yes N2 C71 C31 126.3(4) yes N1 C71 C31 109.0(4) yes C71 N1 C2 107.8(4) yes C3 C2 N1 110.6(4) yes C2 C3 C31 106.4(4) yes C2 C3 C8 126.3(4) yes C31 C3 C8 127.3(4) yes C3 C8 C9 113.9(4) yes O2 C9 O1 123.9(4) yes O2 C9 C8 122.2(5) yes O1 C9 C8 113.9(4) yes C42 C312 C712 116.2(4) yes C42 C312 C32 137.3(4) yes C712 C312 C32 106.6(4) yes C52 C42 C312 119.1(5) yes C42 C52 C62 119.5(5) yes N22 C62 C52 124.3(5) yes C712 N22 C62 114.7(4) yes N22 C712 N12 125.4(4) yes N22 C712 C312 126.3(4) yes N12 C712 C312 108.3(4) yes C712 N12 C22 108.0(4) yes C32 C22 N12 111.1(4) yes C22 C32 C312 106.1(4) yes C22 C32 C82 127.2(5) yes C312 C32 C82 126.7(4) yes C32 C82 C92 112.4(4) yes O22 C92 O12 124.0(5) yes O22 C92 C82 123.1(5) yes O12 C92 C82 112.8(5) yes loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag C31 C4 . 1.378(6) yes C31 C71 . 1.410(6) yes C31 C3 . 1.431(6) yes C4 C5 . 1.375(7) yes C5 C6 . 1.382(7) yes C6 N2 . 1.345(6) yes N2 C71 . 1.329(6) yes C71 N1 . 1.358(6) yes N1 C2 . 1.377(5) yes C2 C3 . 1.364(6) yes C3 C8 . 1.497(6) yes C8 C9 . 1.505(6) yes C9 O2 . 1.204(5) yes C9 O1 . 1.301(6) yes C312 C42 . 1.378(6) yes C312 C712 . 1.407(6) yes C312 C32 . 1.431(6) yes C42 C52 . 1.378(7) yes C52 C62 . 1.378(7) yes C62 N22 . 1.335(6) yes N22 C712 . 1.334(6) yes C712 N12 . 1.363(6) yes N12 C22 . 1.366(6) yes C22 C32 . 1.355(6) yes C32 C82 . 1.503(6) yes C82 C92 . 1.515(7) yes C92 O22 . 1.202(6) yes C92 O12 . 1.306(6) yes loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag O1 C31 3.329(5) . no O1 N2 2.662(5) 3_565 no O2 C22 3.395(5) 4 no O2 N1 2.840(5) 3_565 no O12 N22 2.644(5) 3_455 no O12 C312 3.305(5) . no O12 C42 3.325(5) . no O22 N12 2.886(5) 3_455 no O22 C2 3.369(5) 3_465 no O1 H52 2.8097 2_664 no O1 H8A 2.7263 1_565 no O2 H22 2.6785 3 no O2 H1 2.0419 3_565 no O12 H42 2.8698 . no O22 H8B 2.8633 3_455 no O22 H2 2.5496 3_465 no O22 H12 2.0961 3_455 no N1 O2 2.840(5) 3_465 no N2 C9 3.416(6) 3_465 no N2 O1 2.662(5) 3_465 no N12 O22 2.886(5) 3_555 no N22 O12 2.644(5) 3_555 no N22 C92 3.408(6) 3_555 no N2 H1A 1.8484 3_465 no N22 H12A 1.8292 3_555 no C2 O22 3.369(5) 3_565 no C2 C8 3.479(6) 1_565 no C4 C71 3.558(7) 1_545 no C5 C62 3.541(7) 2_664 no C8 C2 3.479(6) 1_545 no C9 N2 3.416(6) 3_565 no C22 C82 3.534(7) 1_545 no C22 O2 3.395(5) 3_455 no C31 O1 3.329(5) . no C42 O12 3.325(5) . no C62 C5 3.541(7) 2_665 no C71 C4 3.558(7) 1_565 no C82 C22 3.534(7) 1_565 no C92 N22 3.408(6) 3_455 no C2 H8A 3.0628 1_565 no C3 H8A 3.0196 1_565 no C5 H62 2.9345 2_664 no C6 H1A 2.8265 3_465 no C6 H42 3.0786 4_544 no C9 H1 2.9852 3_565 no C9 H8A 2.8557 1_565 no C32 H82B 2.9190 1_545 no C52 H6 3.0114 2_555 no C62 H12A 2.7890 3_555 no C71 H1A 2.7865 3_465 no C92 H12 3.0353 3_455 no C92 H82B 2.9506 1_545 no C312 O12 3.305(5) . no C712 H12A 2.7830 3_555 no H1 C9 2.9852 3_465 no H1 O2 2.0419 3_465 no H1 H22 2.5894 . no H1A C6 2.8265 3_565 no H1A N2 1.8484 3_565 no H1A C71 2.7865 3_565 no H2 O22 2.5496 3_565 no H6 C52 3.0114 2_554 no H6 H42 2.4601 4_544 no H8A C2 3.0628 1_545 no H8A C3 3.0196 1_545 no H8A C9 2.8557 1_545 no H8A O1 2.7263 1_545 no H8B O22 2.8633 3_555 no H12 O22 2.0961 3_555 no H12 C92 3.0353 3_555 no H12A N22 1.8292 3_455 no H12A C62 2.7890 3_455 no H12A C712 2.7830 3_455 no H22 O2 2.6785 3_455 no H22 H1 2.5894 . no H42 O12 2.8698 . no H42 C6 3.0786 4_555 no H42 H6 2.4601 4_555 no H52 O1 2.8097 2_665 no H62 C5 2.9345 2_665 no H82B C32 2.9190 1_565 no H82B C92 2.9506 1_565 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H1 O2 3_465 .859 2.042 2.840(5) 154.2 yes O1 H1A N2 3_565 .821 1.848 2.662(5) 170.7 yes N12 H12 O22 3_555 .860 2.096 2.886(5) 152.4 yes O12 H12A N22 3_455 .821 1.829 2.644(5) 171.9 yes C2 H2 O22 3_565 .930 2.550 3.369(5) 147.1 no loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C2 C3 C8 C9 -91.5(6) yes C3 C8 C9 O2 119.5(5) yes C22 C32 C82 C92 101.3(6) yes C32 C82 C92 O22 -107.0(5) yes C71 N1 C2 C3 -.6(5) no C2 N1 C71 C31 .1(5) no C2 N1 C71 N2 179.6(4) no C6 N2 C71 N1 179.6(4) no C71 N2 C6 C5 1.3(7) no C6 N2 C71 C31 -.8(7) no C712 N12 C22 C32 .3(6) no C22 N12 C712 C312 .3(4) no C22 N12 C712 N22 -179.9(4) no C712 N22 C62 C52 .4(8) no C62 N22 C712 N12 -180.0(4) no C62 N22 C712 C312 -.2(7) no N1 C2 C3 C8 179.3(4) no N1 C2 C3 C31 1.1(5) no C2 C3 C31 C4 179.9(8) no C8 C3 C31 C71 -179.3(4) no C8 C3 C31 C4 1.8(9) no C2 C3 C31 C71 -1.1(5) no C31 C3 C8 C9 86.4(6) no C31 C4 C5 C6 .6(8) no C5 C4 C31 C3 178.7(5) no C5 C4 C31 C71 .1(7) no C4 C5 C6 N2 -1.3(9) no C3 C8 C9 O1 -59.9(5) no C4 C31 C71 N1 -179.8(4) no C3 C31 C71 N1 .8(5) no C4 C31 C71 N2 -.1(7) no C3 C31 C71 N2 -178.9(4) no N12 C22 C32 C82 178.8(4) no N12 C22 C32 C312 -.7(5) no C22 C32 C312 C712 .9(5) no C312 C32 C82 C92 -79.3(6) no C82 C32 C312 C42 .2(9) no C82 C32 C312 C712 -178.6(4) no C22 C32 C312 C42 179.7(5) no C312 C42 C52 C62 1.1(8) no C52 C42 C312 C32 -179.5(5) no C52 C42 C312 C712 -.8(7) no C42 C52 C62 N22 -.9(9) no C32 C82 C92 O12 71.2(5) no loop_ _cod_related_entry_id _cod_related_entry_database _cod_related_entry_code 1 ChemSpider 21107255 2 PubChem 139057839