#------------------------------------------------------------------------------ #$Date: 2008-01-26 13:05:32 +0000 (Sat, 26 Jan 2008) $ #$Revision: 19 $ #$URL: svn://www.crystallography.net/cod/cif/2/2011251.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2011251 _journal_name_full 'Acta Crystallographica, Section C' _journal_year 2000 _journal_volume 56 _journal_page_first e343 _journal_page_last e345 _publ_section_title ; Two isomeric dideoxynucleosides ; loop_ _publ_author_name 'Swenson, Dale C.' 'Nair, Vasu' 'Bera, Sanjib' _chemical_formula_moiety 'C11 H13 N5 O2' _chemical_formula_sum 'C11 H13 N5 O2' _chemical_formula_weight 247.26 _symmetry_cell_setting 'Orthorhombic' _symmetry_space_group_name_H-M 'P 21 21 21' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' _cell_length_a 9.727(2) _cell_length_b 16.632(4) _cell_length_c 7.104(2) _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_volume 1149.3(5) _cell_formula_units_Z 4 _cell_measurement_temperature 210(2) _exptl_crystal_density_diffrn 1.429 _diffrn_ambient_temperature 210(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1 .58625(15) .93347(8) .7844(2) .0263(3) Uani d . 1 . . N C2 .51904(18) .86504(10) .8226(2) .0283(4) Uani d . 1 . . C H2 .4660 .8657 .9315 .034 Uiso calc R 1 . . H N3 .51725(15) .79598(8) .7266(2) .0270(3) Uani d . 1 . . N C4 .59144(16) .80265(9) .5669(2) .0216(3) Uani d . 1 . . C C5 .66519(17) .86903(9) .5073(2) .0217(4) Uani d . 1 . . C C6 .66393(18) .93680(10) .6265(2) .0236(4) Uani d . 1 . . C N6 .73670(17) 1.00338(9) .5930(2) .0294(3) Uani d . 1 . . N H6B .7335 1.0429 .6710 .035 Uiso calc R 1 . . H H6A .7867 1.0067 .4935 .035 Uiso calc R 1 . . H N7 .73282(15) .85309(8) .3395(2) .0252(3) Uani d . 1 . . N C8 .69869(17) .77840(10) .3012(2) .0262(4) Uani d . 1 . . C H8 .7293 .7512 .1947 .031 Uiso calc R 1 . . H N9 .61379(14) .74447(8) .43286(19) .0235(3) Uani d . 1 . . N O1' .70105(12) .57710(7) .25746(18) .0293(3) Uani d . 1 . . O C2' .57703(18) .57818(10) .1480(2) .0248(4) Uani d . 1 . . C H2' .5278 .5273 .1657 .030 Uiso calc R 1 . . H C3' .49360(17) .64604(10) .2329(2) .0232(4) Uani d . 1 . . C C4' .55393(18) .66314(9) .4263(2) .0243(4) Uani d . 1 . . C H4' .4831 .6573 .5235 .029 Uiso calc R 1 . . H C5' .6618(2) .59661(10) .4460(2) .0305(4) Uani d . 1 . . C H5'B .7404 .6155 .5175 .037 Uiso calc R 1 . . H H5'A .6232 .5500 .5089 .037 Uiso calc R 1 . . H C6' .6127(2) .58823(11) -.0591(2) .0293(4) Uani d . 1 . . C H6'B .6746 .5453 -.0963 .035 Uiso calc R 1 . . H H6'A .5294 .5830 -.1332 .035 Uiso calc R 1 . . H O6' .67537(14) .66326(8) -.10049(19) .0331(3) Uani d . 1 . . O H6' .6158 .6964 -.1260 .050(7) Uiso calc R 1 . . H C7' .39301(18) .68600(11) .1517(3) .0327(4) Uani d . 1 . . C H7'B .3667 .6734 .0294 .039 Uiso calc R 1 . . H H7'A .3482 .7269 .2167 .039 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1 .0311(7) .0245(7) .0234(7) -.0002(6) -.0004(7) -.0020(6) C2 .0309(8) .0285(9) .0254(9) -.0017(7) .0050(8) -.0022(8) N3 .0311(7) .0244(7) .0255(7) -.0029(6) .0051(6) -.0011(6) C4 .0230(8) .0202(8) .0216(8) .0016(6) -.0027(7) -.0002(6) C5 .0227(8) .0198(8) .0228(8) .0012(6) -.0027(7) .0015(7) C6 .0258(8) .0210(8) .0239(8) .0012(7) -.0045(7) .0018(7) N6 .0432(8) .0210(6) .0241(7) -.0063(6) .0034(7) -.0031(6) N7 .0298(7) .0214(6) .0246(7) -.0035(6) .0020(6) .0001(6) C8 .0289(9) .0258(8) .0240(8) -.0026(7) .0035(7) -.0012(7) N9 .0278(7) .0190(7) .0236(7) -.0019(6) .0022(6) -.0023(6) O1' .0329(7) .0295(6) .0254(6) .0080(5) -.0006(5) -.0001(5) C2' .0297(8) .0187(7) .0260(8) -.0019(7) -.0001(7) .0001(7) C3' .0239(8) .0194(7) .0262(8) -.0048(7) .0035(7) .0007(7) C4' .0296(9) .0197(8) .0234(8) -.0037(7) .0037(8) -.0005(7) C5' .0448(10) .0219(8) .0249(8) .0016(8) -.0034(8) .0008(7) C6' .0377(10) .0248(8) .0253(8) -.0002(8) .0012(8) -.0029(7) O6' .0363(7) .0302(7) .0329(7) -.0019(6) .0050(6) .0053(6) C7' .0297(9) .0324(9) .0360(10) .0018(8) -.0011(9) -.0013(8) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1 C2 . 1.340(2) yes N1 C6 . 1.354(2) yes C2 N3 . 1.336(2) yes C2 H2 . .9300 ? N3 C4 . 1.349(2) yes C4 N9 . 1.375(2) yes C4 C5 . 1.383(2) yes C5 N7 . 1.387(2) yes C5 C6 . 1.410(2) yes C6 N6 . 1.336(2) yes N6 H6B . .8600 ? N6 H6A . .8600 ? N7 C8 . 1.314(2) yes C8 N9 . 1.370(2) yes C8 H8 . .9300 ? N9 C4' . 1.473(2) yes O1' C5' . 1.430(2) yes O1' C2' . 1.435(2) yes C2' C3' . 1.515(2) yes C2' C6' . 1.521(2) yes C2' H2' . .9800 ? C3' C7' . 1.316(2) yes C3' C4' . 1.521(2) yes C4' C5' . 1.532(2) yes C4' H4' . .9800 ? C5' H5'B . .9700 ? C5' H5'A . .9700 ? C6' O6' . 1.420(2) yes C6' H6'B . .9700 ? C6' H6'A . .9700 ? O6' H6' . .8200 ? C7' H7'B . .9300 ? C7' H7'A . .9300 ?