#------------------------------------------------------------------------------ #$Date: 2009-11-16 01:43:51 +0000 (Mon, 16 Nov 2009) $ #$Revision: 853 $ #$URL: svn://www.crystallography.net/cod/cif/2/2011252.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_2011252 _journal_name_full 'Acta Crystallographica, Section C' _journal_year 2000 _journal_volume 56 _journal_page_first e343 _journal_page_last e345 _publ_section_title ; Two isomeric dideoxynucleosides ; _space_group_IT_number 4 _symmetry_space_group_name_Hall 'P 2yb' _symmetry_space_group_name_H-M 'P 1 21 1' _[local]_cod_cif_authors_sg_H-M 'P 21' loop_ _publ_author_name 'Swenson, Dale C.' 'Nair, Vasu' 'Bera, Sanjib' _chemical_formula_moiety 'C11 H13 N5 O2' _chemical_formula_sum 'C11 H13 N5 O2' _chemical_formula_weight 247.26 _symmetry_cell_setting 'Monoclinic' loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, y+1/2, -z' _cell_length_a 8.496(4) _cell_length_b 18.530(6) _cell_length_c 7.226(2) _cell_angle_alpha 90.00 _cell_angle_beta 90.81(4) _cell_angle_gamma 90.00 _cell_volume 1137.5(7) _cell_formula_units_Z 4 _cell_measurement_temperature 200(2) _exptl_crystal_density_diffrn 1.444 _diffrn_ambient_temperature 200(2) loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol N1A .0989(5) .2273(2) .4457(6) .0258(10) Uani d . 1 . . N C2A .0726(6) .2636(3) .5991(7) .0252(12) Uani d . 1 . . C H2A -.0315 .2759 .6213 .030 Uiso calc R 1 . . H N3A .1785(5) .2845(2) .7261(6) .0247(10) Uani d . 1 . . N C4A .3318(6) .2643(3) .6939(7) .0200(11) Uani d . 1 . . C C5A .3694(6) .2257(3) .5378(7) .0251(12) Uani d . 1 . . C C6A .2499(6) .2052(3) .4085(7) .0231(11) Uani d . 1 . . C N6A .2740(5) .1688(3) .2562(6) .0302(11) Uani d . 1 . . N H6A1 .1964 .1592 .1824 .036 Uiso calc R 1 . . H H6A2 .3673 .1544 .2300 .036 Uiso calc R 1 . . H N7A .5308(5) .2131(3) .5411(6) .0266(10) Uani d . 1 . . N C8A .5762(6) .2462(3) .6985(8) .0289(12) Uani d . 1 . . C H8A .6810 .2470 .7375 .035 Uiso calc R 1 . . H N9A .4603(5) .2787(2) .7984(6) .0271(10) Uani d . 1 . . N O1'A -.1319(4) .34989(19) .9012(5) .0296(9) Uani d . 1 . . O C2'A -.0613(6) .4210(3) .8949(8) .0258(12) Uani d . 1 . . C H2'A -.0649 .4425 1.0186 .031 Uiso calc R 1 . . H C3'A .1078(6) .4056(3) .8482(7) .0248(11) Uani d . 1 . . C C4'A .1406(6) .3271(3) .8943(7) .0220(11) Uani d . 1 . . C H4'A .2269 .3236 .9853 .026 Uiso calc R 1 . . H C5'A -.0150(7) .3042(3) .9824(9) .0332(13) Uani d . 1 . . C H5'1 -.0377 .2539 .9557 .040 Uiso calc R 1 . . H H5'2 -.0103 .3107 1.1156 .040 Uiso calc R 1 . . H C6'A -.1535(7) .4666(4) .7644(9) .0395(15) Uani d . 1 . . C H6'1 -.0907 .5081 .7309 .047 Uiso calc R 1 . . H H6'2 -.1750 .4392 .6524 .047 Uiso calc R 1 . . H O6'A -.2981(5) .4909(2) .8375(7) .0475(12) Uani d . 1 . . O H6'A -.3457 .4566 .8816 .071 Uiso calc R 1 . . H C7'A .2108(7) .4513(3) .7794(8) .0355(14) Uani d . 1 . . C H7'1 .1812 .4987 .7547 .043 Uiso calc R 1 . . H H7'2 .3128 .4362 .7555 .043 Uiso calc R 1 . . H N1B .4063(5) .6152(2) -.0969(6) .0232(10) Uani d . 1 . . N C2B .4414(6) .5805(3) .0567(7) .0260(12) Uani d . 1 . . C H2B .5456 .5662 .0729 .031 Uiso calc R 1 . . H N3B .3411(5) .5634(2) .1934(6) .0224(9) Uani d . 1 . . N C4B .1859(6) .5823(3) .1631(7) .0231(11) Uani d . 1 . . C C5B .1393(6) .6163(3) -.0006(7) .0219(11) Uani d . 1 . . C N6B .2215(5) .6686(3) -.2885(6) .0278(11) Uani d . 1 . . N H6B1 .2958 .6769 -.3652 .033 Uiso calc R 1 . . H H6B2 .1268 .6819 -.3146 .033 Uiso calc R 1 . . H C6B .2525(6) .6355(3) -.1323(7) .0245(11) Uani d . 1 . . C N7B -.0220(5) .6259(2) .0036(6) .0266(10) Uani d . 1 . . N C8B -.0562(6) .5960(3) .1669(8) .0301(13) Uani d . 1 . . C H8B -.1595 .5943 .2076 .036 Uiso calc R 1 . . H N9B .0628(5) .5683(3) .2716(6) .0293(11) Uani d . 1 . . N O1'B .6395(4) .4786(2) .3358(5) .0305(9) Uani d . 1 . . O C2'B .5401(6) .4157(3) .3560(8) .0295(13) Uani d . 1 . . C H2'B .5603 .3933 .4769 .035 Uiso calc R 1 . . H C3'B .3743(6) .4454(3) .3489(7) .0232(11) Uani d . 1 . . C C4'B .3857(6) .5270(3) .3681(7) .0265(12) Uani d . 1 . . C H4'B .3172 .5434 .4676 .032 Uiso calc R 1 . . H C5'B .5577(6) .5363(3) .4267(8) .0293(12) Uani d . 1 . . C H5'3 .5975 .5828 .3874 .035 Uiso calc R 1 . . H H5'4 .5698 .5325 .5601 .035 Uiso calc R 1 . . H O6'B .5338(4) .3902(2) .0311(5) .0322(9) Uani d . 1 . . O H6'B .5062 .3566 -.0359 .048 Uiso calc R 1 . . H C6'B .5784(7) .3634(3) .2055(8) .0324(13) Uani d . 1 . . C H6'3 .6907 .3538 .2075 .039 Uiso calc R 1 . . H H6'4 .5242 .3182 .2277 .039 Uiso calc R 1 . . H C7'B .2417(7) .4077(3) .3349(8) .0346(13) Uani d . 1 . . C H7'3 .2453 .3576 .3283 .042 Uiso calc R 1 . . H H7'4 .1452 .4314 .3316 .042 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 N1A .020(2) .015(2) .042(3) -.0003(18) .0022(19) -.002(2) C2A .022(3) .018(3) .036(3) .001(2) .001(2) -.002(2) N3A .020(2) .015(2) .039(3) .0030(17) .0052(19) -.003(2) C4A .022(2) .012(2) .026(3) .002(2) .002(2) .003(2) C5A .026(3) .018(3) .031(3) -.002(2) .001(2) .000(2) C6A .025(3) .010(2) .034(3) -.001(2) .002(2) .001(2) N6A .022(2) .030(3) .038(3) .001(2) .000(2) -.011(2) N7A .016(2) .028(3) .036(2) .0011(19) .0051(18) .000(2) C8A .024(3) .025(3) .038(3) .000(2) -.001(2) -.006(3) N9A .023(2) .024(2) .035(2) .0000(19) .0008(19) -.009(2) O1'A .0224(18) .0176(19) .049(2) .0016(16) .0079(16) -.0008(18) C2'A .029(3) .012(3) .036(3) .003(2) .004(2) -.001(2) C3'A .029(3) .013(3) .033(3) .003(2) .003(2) -.004(2) C4'A .020(3) .015(3) .031(3) .002(2) .006(2) -.004(2) C5'A .033(3) .022(3) .045(3) .007(2) .011(3) -.003(3) C6'A .032(3) .036(4) .050(4) .011(3) .006(3) .003(3) O6'A .035(2) .036(3) .072(3) .016(2) .015(2) .022(3) C7'A .045(3) .014(3) .048(4) -.005(2) .017(3) -.004(3) N1B .017(2) .017(2) .035(2) -.0011(18) .0011(18) .007(2) C2B .016(2) .024(3) .039(3) .000(2) .004(2) -.001(3) N3B .020(2) .017(2) .031(2) .0054(18) .0039(17) .003(2) C4B .020(2) .020(3) .029(3) -.005(2) .002(2) .000(2) C5B .020(3) .013(2) .033(3) -.002(2) .001(2) -.003(2) N6B .016(2) .031(3) .037(3) .0018(19) .0047(19) .011(2) C6B .024(3) .016(3) .034(3) -.006(2) .005(2) -.003(2) N7B .020(2) .019(2) .041(3) .0007(18) .0016(19) .004(2) C8B .017(2) .030(3) .043(3) -.001(2) .008(2) -.001(3) N9B .022(2) .023(2) .044(3) .004(2) .008(2) .005(2) O1'B .0248(19) .0212(19) .046(2) .0030(16) .0038(16) -.0025(18) C2'B .031(3) .016(3) .041(3) .006(2) -.004(2) .010(3) C3'B .026(3) .016(2) .027(3) .001(2) .005(2) .001(2) C4'B .028(3) .023(3) .028(3) .007(2) .001(2) -.001(2) C5'B .030(3) .020(3) .038(3) .004(2) -.002(2) -.002(2) O6'B .032(2) .024(2) .041(2) -.0012(17) .0007(17) -.0058(18) C6'B .032(3) .019(3) .046(3) .004(2) .003(3) -.002(3) C7'B .028(3) .030(3) .046(3) -.003(2) .000(3) .005(3) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag N1A C2A . 1.318(7) yes N1A C6A . 1.377(7) yes C2A N3A . 1.333(7) yes C2A H2A . .9300 ? N3A C4A . 1.379(6) yes N3A C4'A . 1.489(6) yes C4A N9A . 1.345(7) yes C4A C5A . 1.377(7) yes C5A N7A . 1.391(7) yes C5A C6A . 1.421(7) yes C6A N6A . 1.310(7) yes N6A H6A1 . .8600 ? N6A H6A2 . .8600 ? N7A C8A . 1.343(7) yes C8A N9A . 1.369(7) yes C8A H8A . .9300 ? O1'A C5'A . 1.425(7) yes O1'A C2'A . 1.448(6) yes C2'A C6'A . 1.482(8) yes C2'A C3'A . 1.507(7) yes C2'A H2'A . .9800 ? C3'A C7'A . 1.321(8) yes C3'A C4'A . 1.516(7) yes C4'A C5'A . 1.535(8) yes C4'A H4'A . .9800 ? C5'A H5'1 . .9700 ? C5'A H5'2 . .9700 ? C6'A O6'A . 1.417(7) yes C6'A H6'1 . .9700 ? C6'A H6'2 . .9700 ? O6'A H6'A . .8200 ? C7'A H7'1 . .9300 ? C7'A H7'2 . .9300 ? N1B C2B . 1.314(7) yes N1B C6B . 1.380(6) yes C2B N3B . 1.351(7) yes C2B H2B . .9300 ? N3B C4B . 1.379(6) yes N3B C4'B . 1.476(7) yes C4B N9B . 1.341(7) yes C4B C5B . 1.392(8) yes C5B N7B . 1.383(7) yes C5B C6B . 1.408(7) yes N6B C6B . 1.308(7) yes N6B H6B1 . .8600 ? N6B H6B2 . .8600 ? N7B C8B . 1.339(7) yes C8B N9B . 1.355(7) yes C8B H8B . .9300 ? O1'B C5'B . 1.440(7) yes O1'B C2'B . 1.447(7) yes C2'B C6'B . 1.497(8) yes C2'B C3'B . 1.512(8) yes C2'B H2'B . .9800 ? C3'B C7'B . 1.328(8) yes C3'B C4'B . 1.522(8) yes C4'B C5'B . 1.526(7) yes C4'B H4'B . .9800 ? C5'B H5'3 . .9700 ? C5'B H5'4 . .9700 ? O6'B C6'B . 1.402(7) yes O6'B H6'B . .8200 ? C6'B H6'3 . .9700 ? C6'B H6'4 . .9700 ? C7'B H7'3 . .9300 ? C7'B H7'4 . .9300 ?