#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/13/2011329.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011329 loop_ _publ_author_name ' Muthuraman, Meiyappan ' ' Nicoud, Jean-Fran\,cois ' ' Bagieu-Beucher, Muriel ' _publ_section_title ; Sodium 5-nitro-2-pyridonate trihydrate ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1077 _journal_page_last 1078 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac 'Na(C5 H3 N2 O3 ) , 3H2 O' _chemical_formula_moiety 'C5 H3 N2 O3 - , Na + , 3H2 O ' _chemical_formula_sum 'C5 H9 N2 Na O6' _chemical_formula_weight 216.13 _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _cell_angle_alpha 102.978(8) _cell_angle_beta 104.697(4) _cell_angle_gamma 74.017(8) _cell_formula_units_Z 2 _cell_length_a 7.0044(5) _cell_length_b 11.1820(10) _cell_length_c 6.3971(8) _cell_measurement_reflns_used 2258 _cell_measurement_temperature 296.2 _cell_measurement_theta_max 22,61 _cell_measurement_theta_min 2,81 _cell_volume 459.42(8) _computing_cell_refinement KappaCCD _computing_data_collection 'KappaCCD (Enraf-Nonius, 1998)' _computing_data_reduction 'TEXSAN (Molecular Structure Corporation, 1997)' _computing_molecular_graphics 'ORTEP (Johnson, 1976) and MOLVIEW (Cense, 1990)' _computing_publication_material TEXSAN _computing_structure_refinement TEXSAN _computing_structure_solution ; SIR92 (Altomare et al., 1993) ; _diffrn_ambient_temperature 296.2 _diffrn_measurement_device KappaCCD _diffrn_measurement_method \f _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type 'Ag K\a' _diffrn_radiation_wavelength .5608 _diffrn_reflns_av_R_equivalents .00000 _diffrn_reflns_av_sigmaI/netI .103 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -9 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min -15 _diffrn_reflns_limit_l_max 8 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_reduction_process 'Lp corrections applied' _diffrn_reflns_theta_max 22.61 _diffrn_reflns_theta_min 2.81 _diffrn_standards_decay_% / _exptl_absorpt_coefficient_mu .102 _exptl_absorpt_correction_type none _exptl_crystal_colour yellow _exptl_crystal_density_diffrn 1.562 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description needle _exptl_crystal_F_000 224.00 _exptl_crystal_size_max .34 _exptl_crystal_size_mid .14 _exptl_crystal_size_min .11 _refine_diff_density_max .31 _refine_diff_density_min -.28 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_all 1.908 _refine_ls_goodness_of_fit_ref 1.910 _refine_ls_hydrogen_treatment noref _refine_ls_matrix_type full _refine_ls_number_constraints 0 _refine_ls_number_parameters 127 _refine_ls_number_reflns 1573 _refine_ls_number_restraints 0 _refine_ls_R_factor_all .0514 _refine_ls_R_factor_gt .0510 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .0001 _refine_ls_structure_factor_coef F _refine_ls_weighting_details 'w = 1/[\s^2^(Fo)]' _refine_ls_weighting_scheme sigma _refine_ls_wR_factor_all .0570 _refine_ls_wR_factor_ref .0570 _reflns_number_gt 1573 _reflns_number_total 2258 _reflns_threshold_expression I>3.00\s(I) _[local]_cod_data_source_file gs1079.cif _[local]_cod_data_source_block Na5N2py _[local]_cod_cif_authors_sg_H-M 'P -1 ' _[local]_cod_chemical_formula_sum_orig 'C5 H9 N2 Na O6 ' _cod_original_cell_volume 459.40(9) _cod_database_code 2011329 loop_ _symmetry_equiv_pos_as_xyz ' +x, +y, +z' ' -x, -y, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_calc_attached_atom _atom_site_refinement_flags _atom_site_occupancy Na1 .60107(8) .44741(5) .75827(8) .0414(2) Uani d ? . 1.000 O1 .9347(2) -.30740(9) .6454(2) .0450(3) Uani d ? . 1.000 O2 .6122(2) .13815(11) .1563(2) .0690(4) Uani d ? . 1.000 O3 .6263(2) .24290(10) .4802(2) .0698(4) Uani d ? . 1.000 O4 .9128(2) .3444(2) .9266(2) .0906(5) Uani d ? . 1.000 O5 .5640(2) .63327(9) 1.0299(2) .0470(3) Uani d ? . 1.000 O6 .27311(13) .50049(9) .5196(2) .0406(3) Uani d ? . 1.000 N1 .7957(2) -.19659(11) .3649(2) .0501(4) Uani d ? . 1.000 N2 .6485(2) .14286(11) .3564(2) .0391(4) Uani d ? . 1.000 C1 .8650(2) -.20009(12) .5839(2) .0328(4) Uani d ? . 1.000 C2 .8558(2) -.08602(13) .7355(2) .0411(4) Uani d ? . 1.000 C3 .7846(2) .02772(13) .6660(2) .0406(4) Uani d ? . 1.000 C4 .7209(2) .02791(12) .4430(2) .0310(4) Uani d ? . 1.000 C5 .7277(2) -.08527(13) .3005(2) .0464(4) Uani d ? . 1.000 H1 .9064 -.0890 .9084 .062 Uiso c ? . 1.000 H2 .7776 .1143 .7810 .061 Uiso c ? . 1.000 H3 .6745 -.0824 .1273 .070 Uiso c ? . 1.000 H4 1.0199 .3138 .8470 .137 Uiso c ? . 1.000 H5 .9576 .3296 1.0336 .137 Uiso c ? . 1.000 H6 .6662 .6673 1.1405 .071 Uiso c ? . 1.000 H7 .5131 .6862 .9925 .071 Uiso c ? . 1.000 H8 .1888 .5589 .5766 .061 Uiso c ? . 1.000 H9 .2200 .4385 .4619 .061 Uiso c ? . 1.000 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Na1 .0456(4) .0411(4) .0359(4) -.0055(3) .0073(2) .0100(3) O1 .0548(6) .0331(6) .0442(6) -.0059(5) .0039(5) .0133(5) O2 .1104(10) .0446(7) .0462(8) -.0076(7) .0053(6) .0208(6) O3 .1015(10) .0264(6) .0678(9) -.0067(6) .0088(7) .0003(6) O4 .0630(8) .1352(13) .0460(8) .0288(8) .0081(6) .0276(8) O5 .0608(7) .0361(6) .0439(6) -.0153(5) .0000(5) .0131(5) O6 .0380(5) .0329(5) .0501(6) -.0059(4) .0103(4) .0066(4) N1 .0832(9) .0269(7) .0315(7) -.0061(6) .0049(6) .0031(5) N2 .0413(7) .0301(7) .0448(8) -.0076(5) .0062(5) .0079(6) C1 .0327(7) .0330(8) .0332(8) -.0067(5) .0061(5) .0083(6) C2 .0513(8) .0393(9) .0291(8) -.0105(7) .0019(6) .0055(6) C3 .0505(8) .0334(8) .0335(8) -.0104(6) .0058(6) -.0012(6) C4 .0327(7) .0264(7) .0338(8) -.0058(5) .0071(5) .0053(6) C5 .0724(10) .0318(8) .0294(8) -.0059(7) .0080(7) .0043(6) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Na1 O3 . . 2.556(2) ? Na1 O4 . . 2.288(2) ? Na1 O5 . . 2.391(2) ? Na1 O5 . 2_667 2.430(2) ? Na1 O6 . . 2.4160(10) ? Na1 O6 . 2_666 2.4120(10) ? O1 C1 . . 1.275(2) ? O2 N2 . . 1.232(2) ? O3 N2 . . 1.213(2) ? O4 H4 . . .96 no O4 H5 . . .71 no O5 H6 . . .97 no O5 H7 . . .66 no O6 H8 . . .84 no O6 H9 . . .84 no N1 C1 . . 1.367(2) ? N1 C5 . . 1.323(3) ? N2 C4 . . 1.426(2) ? C1 C2 . . 1.415(3) ? C2 C3 . . 1.362(3) ? C2 H1 . . 1.08 no C3 C4 . . 1.383(3) ? C3 H2 . . 1.07 no C4 C5 . . 1.380(3) ? C5 H3 . . 1.08 no loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; H .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; N .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; O .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; Na .000 .000 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; loop_ _diffrn_reflns_number 2258 loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O3 Na1 O4 . . . 83.10(7) ? O3 Na1 O5 . . . 176.08(6) ? O3 Na1 O5 . . 2_667 91.06(6) ? O3 Na1 O6 . . . 81.50(6) ? O3 Na1 O6 . . 2_666 78.25(6) ? O4 Na1 O5 . . . 97.38(7) ? O4 Na1 O5 . . 2_667 90.69(6) ? O4 Na1 O6 . . . 164.41(7) ? O4 Na1 O6 . . 2_666 94.65(6) ? O5 Na1 O5 . . . 85.05(5) ? O5 Na1 O6 . . . 97.82(5) ? O5 Na1 O6 . . 2_666 105.56(5) ? O5 Na1 O6 2_667 . . 87.22(5) ? O5 Na1 O6 2_667 . 2_666 167.35(5) ? O6 Na1 O6 . . . 84.55(5) ? Na1 O3 N2 . . . 176.20(10) ? Na1 O4 H4 . . . 119.2 no Na1 O4 H5 . . . 135.7 no H4 O4 H5 . . . 105.1 no Na1 O5 Na1 . . . 94.95(5) ? Na1 O5 H6 . . . 129.6 no Na1 O5 H7 . . . 115.6 no Na1 O5 H6 . 2_667 2_667 102.9 no Na1 O5 H7 . 2_667 2_667 116.7 no H6 O5 H7 . . . 97.7 no Na1 O6 Na1 . . . 95.45(5) ? Na1 O6 H8 . . . 114.5 no Na1 O6 H9 . . . 114.2 no Na1 O6 H8 . 2_666 2_666 115.3 no Na1 O6 H9 . 2_666 2_666 107.7 no H8 O6 H9 . . . 109.1 no C1 N1 C5 . . . 118.4(2) ? O2 N2 O3 . . . 121.3(2) ? O2 N2 C4 . . . 118.9(2) ? O3 N2 C4 . . . 119.7(2) ? O1 C1 N1 . . . 118.4(2) ? O1 C1 C2 . . . 121.9(2) ? N1 C1 C2 . . . 119.7(2) ? C1 C2 C3 . . . 120.9(2) ? C1 C2 H1 . . . 119.6 no C3 C2 H1 . . . 119.4 no C2 C3 C4 . . . 117.8(2) ? C2 C3 H2 . . . 120.9 no C4 C3 H2 . . . 121.2 no N2 C4 C3 . . . 121.4(2) ? N2 C4 C5 . . . 119.1(2) ? C3 C4 C5 . . . 119.5(2) ? N1 C5 C4 . . . 123.5(2) ? N1 C5 H3 . . . 118.5 no C4 C5 H3 . . . 118.0 no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 _geom_contact_publ_flag O1 H9 1.9598 2_656 no O1 H5 2.0465 2_757 no O1 H8 2.0571 1_645 no O1 O4 2.755(2) 2_757 no O1 O6 2.797(2) 2_656 no O1 O6 2.875(2) 1_645 no O2 H3 2.4589 2_655 no O2 C5 3.320(3) 2_655 no O4 N1 3.011(2) 2_756 no O5 N1 2.992(2) 1_566 no N1 H6 2.0774 1_544 no N1 H4 2.0931 2_756 no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O4 H5 O1 2_757 .71 2.047 2.755(2) 173 yes O6 H8 O1 1_465 .84 2.057 2.875(2) 166 yes O6 H9 O1 2_656 .84 1.960 2.797(2) 171 yes O5 H7 O2 2_666 .66 2.236 2.891(2) 170 yes C5 H3 O2 2_655 1.08 2.459 3.320(3) 136 yes O4 H4 N1 2_756 .96 2.093 3.011(2) 160 yes O5 H6 N1 1_566 .97 2.077 2.992(2) 157 yes _journal_paper_doi 10.1107/S0108270100009045