#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2011370.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011370 loop_ _publ_author_name 'Li, Chang-Zheng' 'Wang, Liu-Fang' 'Li, Yi-Zhi' 'Xia, Chun-Gu' 'Dai, Rong-Bin' _publ_section_title ; trans-Tetraaquabis(5-fluorouracil-1-acetato-O)zinc(II) tetrahydrate ; _journal_issue 9 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e376 _journal_page_last e377 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac '[Zn (C6 H4 F N2 O4)2 (H2 O)4], 4H2 O' _chemical_formula_moiety 'C12 H16 F2 N4 O12 Zn, 4H2 O' _chemical_formula_structural '(Zn (C6 H4 F N2 O4)2 (H2 O)4) (H2 O)4' _chemical_formula_sum 'C12 H24 F2 N4 O16 Zn' _chemical_formula_weight 583.72 _chemical_name_systematic ; Tetraaqua(5-fluoro-uracil-1-acetato-O)-zinc(II) tetrahydrate ; _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2ybc' _symmetry_space_group_name_H-M 'P 1 21/c 1' _cell_angle_alpha 90.00 _cell_angle_beta 91.53(2) _cell_angle_gamma 90.00 _cell_formula_units_Z 2 _cell_length_a 8.571(2) _cell_length_b 12.102(2) _cell_length_c 10.814(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 16.92 _cell_measurement_theta_min 16.12 _cell_volume 1121.3(4) _computing_cell_refinement 'CAD-4 SDP/VAX' _computing_data_collection 'CAD-4 SDP/VAX (Enraf-Nonius, 1989)' _computing_data_reduction 'TEXSAN (Molecular Structure Corporation, 1989)' _computing_publication_material SHELXL97 _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1997)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .999 _diffrn_measured_fraction_theta_max .999 _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w/2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents <0.0001 _diffrn_reflns_av_sigmaI/netI .1031 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 14 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 1986 _diffrn_reflns_theta_full 24.97 _diffrn_reflns_theta_max 24.97 _diffrn_reflns_theta_min 2.38 _diffrn_standards_decay_% none _diffrn_standards_interval_count 390 _diffrn_standards_number 5 _exptl_absorpt_coefficient_mu 1.198 _exptl_absorpt_correction_T_max .887 _exptl_absorpt_correction_T_min .856 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.729 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_F_000 600 _exptl_crystal_size_max .35 _exptl_crystal_size_mid .15 _exptl_crystal_size_min .10 _refine_diff_density_max .55 _refine_diff_density_min -.48 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref .884 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 160 _refine_ls_number_reflns 1971 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all .884 _refine_ls_R_factor_all .032 _refine_ls_R_factor_gt .030 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0200P)^2^+0.3500P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .110 _reflns_number_gt 1804 _reflns_number_total 1971 _reflns_threshold_expression I>2\s(I)' _[local]_cod_data_source_file qd0010.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/c' _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Monoclinic' changed to 'monoclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2011370 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x, -y+1/2, z+1/2' '-x, -y, -z' '-x, y-1/2, -z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol Zn .5000 .0000 .0000 .02679(18) Uani d S 1 Zn O1 .3934(2) .14660(15) .04207(16) .0432(4) Uani d . 1 O H1A .4217 .2026 -.0161 .080 Uiso d R 1 H H1B .2823 .1366 .0389 .080 Uiso d R 1 H O2 .39370(19) -.08046(14) .15730(14) .0355(4) Uani d . 1 O H2A .4555 -.0943 .2310 .080 Uiso d R 1 H H2B .3055 -.1280 .1423 .080 Uiso d R 1 H O3 .68485(17) .03750(15) .11931(14) .0324(4) Uani d . 1 O O4 .8557(2) .10744(16) -.01108(14) .0426(4) Uani d . 1 O O5 .9746(2) -.11378(15) .30007(16) .0442(4) Uani d . 1 O O6 .6752(3) -.04443(16) .62989(17) .0526(5) Uani d . 1 O N1 .8739(2) .05929(16) .31804(17) .0316(4) Uani d . 1 N N2 .8268(2) -.07540(16) .46500(17) .0336(4) Uani d . 1 N H2 .8436 -.1442 .4939 .080 Uiso d R 1 H F .6286(3) .16990(16) .5513(2) .0841(7) Uani d . 1 F C1 .8130(2) .07815(17) .09320(18) .0276(5) Uani d . 1 C C2 .9324(3) .0932(2) .1989(2) .0353(5) Uani d . 1 C H21 1.0205 .0472 .1816 .080 Uiso d R 1 H H22 .9683 .1683 .2027 .080 Uiso d R 1 H C3 .8961(3) -.04763(19) .3557(2) .0305(5) Uani d . 1 C C4 .7330(4) -.00951(19) .5357(3) .0378(6) Uani d . 1 C C5 .7160(3) .0995(2) .4867(2) .0453(6) Uani d . 1 C C6 .7807(3) .1302(2) .3822(2) .0414(6) Uani d . 1 C H6 .7568 .2020 .3490 .080 Uiso d R 1 H O7 .6117(3) -.25260(17) .74034(18) .0570(5) Uani d . 1 O H7A .6337 -.1825 .7031 .080 Uiso d R 1 H H7B .5874 -.2401 .8254 .080 Uiso d R 1 H O8 .88444(18) -.28662(13) .56606(14) .0361(4) Uani d . 1 O H8A .8245 -.2954 .6391 .080 Uiso d R 1 H H8B .9936 -.2915 .5876 .080 Uiso d R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Zn .0260(3) .0322(3) .0218(3) -.00206(11) -.00574(16) -.00023(11) O1 .0448(10) .0430(9) .0413(10) .0105(7) -.0104(8) -.0098(7) O2 .0373(9) .0448(9) .0243(8) -.0030(7) -.0034(6) .0022(7) O3 .0283(8) .0457(9) .0229(8) -.0083(7) -.0064(6) .0020(7) O4 .0388(9) .0636(11) .0250(8) -.0144(8) -.0062(7) .0077(8) O5 .0515(11) .0480(10) .0331(9) .0094(8) .0035(8) -.0052(7) O6 .0741(14) .0476(11) .0371(10) -.0026(9) .0209(9) -.0039(8) N1 .0357(10) .0371(10) .0214(9) -.0038(8) -.0087(7) .0012(8) N2 .0423(11) .0306(9) .0278(10) .0006(8) -.0013(8) -.0007(7) F .1155(17) .0577(11) .0816(14) .0374(11) .0485(13) .0043(10) C1 .0308(11) .0282(10) .0234(11) -.0028(8) -.0070(9) -.0011(8) C2 .0315(12) .0482(13) .0255(11) -.0104(10) -.0100(9) .0065(9) C3 .0323(12) .0353(13) .0233(11) -.0028(9) -.0099(9) -.0045(9) C4 .0409(15) .0387(14) .0338(15) -.0032(9) -.0005(12) -.0057(9) C5 .0544(16) .0383(13) .0434(14) .0121(11) .0055(12) -.0064(11) C6 .0482(14) .0342(12) .0413(13) .0044(10) -.0064(11) .0014(10) O7 .0814(15) .0524(11) .0372(9) -.0142(10) .0046(9) -.0089(9) O8 .0326(9) .0423(9) .0334(8) .0027(6) -.0012(7) .0049(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' F F .0171 .0103 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Zn Zn .2839 1.4301 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Zn O1 . 3_655 180.0 y O1 Zn O3 . 3_655 89.42(7) y O1 Zn O3 3_655 3_655 90.58(7) y O1 Zn O3 . . 90.58(7) y O1 Zn O3 3_655 . 89.42(7) y O3 Zn O3 3_655 . 180.0 y O1 Zn O2 . 3_655 89.12(7) y O1 Zn O2 3_655 3_655 90.88(7) y O3 Zn O2 3_655 3_655 86.58(6) y O3 Zn O2 . 3_655 93.42(6) y O1 Zn O2 . . 90.88(7) y O1 Zn O2 3_655 . 89.12(7) y O3 Zn O2 3_655 . 93.42(6) y O3 Zn O2 . . 86.58(6) y O2 Zn O2 3_655 . 180.0 y Zn O1 H1A . . 110.0 ? Zn O1 H1B . . 109.3 ? H1A O1 H1B . . 109.5 ? Zn O2 H2A . . 119.5 ? Zn O2 H2B . . 118.6 ? H2A O2 H2B . . 116.8 ? C1 O3 Zn . . 127.76(13) n C3 N1 C6 . . 121.2(2) n C3 N1 C2 . . 118.82(19) n C6 N1 C2 . . 119.4(2) n C4 N2 C3 . . 127.3(2) n C4 N2 H2 . . 115.7 ? C3 N2 H2 . . 117.1 ? O3 C1 O4 . . 126.93(19) n O3 C1 C2 . . 117.17(18) n O4 C1 C2 . . 115.89(18) n N1 C2 C1 . . 112.95(17) n N1 C2 H21 . . 107.5 ? C1 C2 H21 . . 107.5 ? N1 C2 H22 . . 110.3 ? C1 C2 H22 . . 110.6 ? H21 C2 H22 . . 107.7 ? O5 C3 N1 . . 123.3(2) n O5 C3 N2 . . 121.4(2) n N1 C3 N2 . . 115.3(2) n O6 C4 N2 . . 121.2(2) n O6 C4 C5 . . 126.2(2) n N2 C4 C5 . . 112.6(2) n C6 C5 F . . 121.2(2) n C6 C5 C4 . . 122.3(2) n F C5 C4 . . 116.5(2) n C5 C6 N1 . . 121.3(2) n C5 C6 H6 . . 118.8 ? N1 C6 H6 . . 119.9 ? H7A O7 H7B . . 108.2 ? H8A O8 H8B . . 109.5 ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Zn O1 . 2.0521(17) y Zn O1 3_655 2.0521(17) n Zn O3 3_655 2.0668(15) n Zn O3 . 2.0668(15) y Zn O2 3_655 2.1806(16) n Zn O2 . 2.1806(16) y O1 H1A . .9600 ? O1 H1B . .9600 ? O2 H2A . .9600 ? O2 H2B . .9600 ? O3 C1 . 1.243(3) n O4 C1 . 1.246(3) n O5 C3 . 1.216(3) n O6 C4 . 1.220(3) n N1 C3 . 1.368(3) n N1 C6 . 1.373(3) n N1 C2 . 1.454(3) n N2 C4 . 1.378(3) n N2 C3 . 1.378(3) n N2 H2 . .9000 ? F C5 . 1.342(3) n C1 C2 . 1.524(3) n C2 H21 . .9600 ? C2 H22 . .9600 ? C4 C5 . 1.428(4) n C5 C6 . 1.325(4) n C6 H6 . .9600 ? O7 H7A . .9600 ? O7 H7B . .9600 ? O8 H8A . .9599 ? O8 H8B . .9600 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA N2 H2 O8 1_555 .90 1.92 2.818(3) 176.1 O7 H7A O6 1_555 .96 1.89 2.847(3) 179.5 O8 H8A O7 1_555 .96 2.21 3.070(3) 148.0 O1 H1A F 2_554 .96 2.45 2.999(3) 116.3 O1 H1A O7 4_666 .96 2.49 3.288(3) 140.0 O1 H1B O8 4_666 .96 2.03 2.747(2) 130.3 O2 H2A O7 2_544 .96 2.29 2.879(3) 119.2 O2 H2B O4 3_655 .96 1.97 2.645(2) 125.4 O7 H7B O1 3_656 .96 1.83 2.681(2) 146.1 O7 H7B F 4_657 .96 2.55 3.232(3) 127.7 O8 H8A O5 2_545 .96 2.40 2.890(2) 111.0 O8 H8B O4 4_756 .96 1.98 2.651(2) 125.4 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion _geom_torsion_publ_flag O1 Zn O3 C1 . -97.5(2) n O1 Zn O3 C1 3_655 82.5(2) n O3 Zn O3 C1 3_655 14E1(10) n O2 Zn O3 C1 3_655 -8.4(2) n O2 Zn O3 C1 . 171.6(2) n Zn O3 C1 O4 . 1.8(4) n Zn O3 C1 C2 . -177.48(15) n C3 N1 C2 C1 . 90.6(2) n C6 N1 C2 C1 . -80.9(3) n O3 C1 C2 N1 . -1.7(3) n O4 C1 C2 N1 . 178.9(2) n C6 N1 C3 O5 . 178.2(2) n C2 N1 C3 O5 . 6.9(3) n C6 N1 C3 N2 . -3.8(3) n C2 N1 C3 N2 . -175.18(18) n C4 N2 C3 O5 . -178.7(2) n C4 N2 C3 N1 . 3.4(3) n C3 N2 C4 O6 . 178.3(2) n C3 N2 C4 C5 . -2.4(4) n O6 C4 C5 C6 . -178.7(3) n N2 C4 C5 C6 . 2.1(4) n O6 C4 C5 F . .4(5) n N2 C4 C5 F . -178.8(3) n F C5 C6 N1 . 178.0(3) n C4 C5 C6 N1 . -2.9(4) n C3 N1 C6 C5 . 3.8(4) n C2 N1 C6 C5 . 175.1(2) n