#------------------------------------------------------------------------------ #$Date: 2012-02-03 17:16:24 +0000 (Fri, 03 Feb 2012) $ #$Revision: 32112 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/14/2011436.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011436 loop_ _publ_author_name 'SethuSankar, K.' 'Banumathi, S.' 'Krishna, R.' 'Velmurugan, D.' _publ_section_title ; 2,2'-Methylenebis(3-hydroxy-2-cyclohexen-1-one) ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e479 _journal_page_last e480 _journal_volume 56 _journal_year 2000 _chemical_formula_sum 'C13 H16 O4' _chemical_formula_weight 236.26 _chemical_name_systematic ; 2,2'-Methylenebis(3-hydroxy-2-cyclohexen-1-one) ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 9.9313(18) _cell_length_b 10.3818(14) _cell_length_c 23.253(2) _cell_measurement_reflns_used 15 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 28 _cell_measurement_theta_min 2 _cell_volume 2397.5(6) _computing_cell_refinement 'CAD-4 Software' _computing_data_collection 'CAD-4 Software (Enraf-Nonius, 1989)' _computing_data_reduction 'SDP (Frenz, 1978)' _computing_publication_material 'SHELXL97 and PARST (Nardelli, 1995)' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measurement_device_type 'Enraf-Nonius CAD-4' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type CuK\a _diffrn_radiation_wavelength 1.54184 _diffrn_reflns_av_R_equivalents .0000 _diffrn_reflns_av_sigmaI/netI .0185 _diffrn_reflns_limit_h_max 12 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 28 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 2264 _diffrn_reflns_theta_max 69.83 _diffrn_reflns_theta_min 3.80 _diffrn_standards_decay_% 1 _diffrn_standards_interval_time 60 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .799 _exptl_absorpt_correction_type none _exptl_crystal_colour Yellow _exptl_crystal_density_diffrn 1.309 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Rectangle _exptl_crystal_F_000 1008 _exptl_crystal_size_max .20 _exptl_crystal_size_mid .15 _exptl_crystal_size_min .10 _refine_diff_density_max .197 _refine_diff_density_min -.138 _refine_ls_extinction_coef .0075(10) _refine_ls_extinction_method SHELXL97 _refine_ls_goodness_of_fit_ref 1.311 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 157 _refine_ls_number_reflns 2264 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.311 _refine_ls_R_factor_all .055 _refine_ls_R_factor_gt .044 _refine_ls_shift/su_max .003 _refine_ls_shift/su_mean .001 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_scheme 'calc w = 1/[\s^2^(Fo^2^)+(0.1000P)^2^] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_wR_factor_ref .176 _reflns_number_gt 1829 _reflns_number_total 2264 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file qa0324.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_exptl_absorpt_correction_type' value 'None' changed to 'none' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2011436 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' 'x+1/2, -y+1/2, -z' '-x, y+1/2, -z+1/2' '-x+1/2, -y, z+1/2' '-x, -y, -z' '-x-1/2, y-1/2, z' 'x, -y-1/2, z-1/2' 'x-1/2, y, -z-1/2' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O1 .01461(15) .37135(13) .07381(7) .0597(5) Uani d . 1 . . O O2 .10450(18) .29611(15) .17239(7) .0684(5) Uani d . 1 . . O H2 .0622 .3172 .1436 .103 Uiso calc R 1 . . H O3 -.21031(16) -.01946(14) .04335(7) .0616(5) Uani d . 1 . . O H3 -.1828 -.0355 .0758 .092 Uiso calc R 1 . . H C1 -.11522(17) .18421(17) .06350(8) .0422(5) Uani d . 1 . . C O4 -.11738(17) -.09725(15) .14432(7) .0661(5) Uani d . 1 . . O C1' -.02610(18) .10732(18) .16172(8) .0473(5) Uani d . 1 . . C C6' -.03227(19) -.0280(2) .16961(8) .0510(5) Uani d . 1 . . C C6 -.16119(17) .09093(18) .02628(8) .0459(5) Uani d . 1 . . C C2 -.04387(19) .29085(17) .04107(9) .0466(5) Uani d . 1 . . C C7 -.13556(18) .17381(19) .12765(8) .0472(5) Uani d . 1 . . C H7A -.1463 .2602 .1429 .057 Uiso calc R 1 . . H H7B -.2194 .1283 .1344 .057 Uiso calc R 1 . . H C2' .0813(2) .1751(2) .18380(9) .0536(5) Uani d . 1 . . C C3 -.0297(3) .3098(2) -.02241(9) .0591(6) Uani d . 1 . . C H3A .0551 .2733 -.0351 .071 Uiso calc R 1 . . H H3B -.0284 .4013 -.0309 .071 Uiso calc R 1 . . H C4 -.1442(2) .2468(2) -.05494(9) .0586(6) Uani d . 1 . . C H4A -.1274 .2525 -.0960 .070 Uiso calc R 1 . . H H4B -.2277 .2917 -.0467 .070 Uiso calc R 1 . . H C5 -.1575(2) .1072(2) -.03767(9) .0551(5) Uani d . 1 . . C H5A -.2394 .0720 -.0541 .066 Uiso calc R 1 . . H H5B -.0820 .0590 -.0531 .066 Uiso calc R 1 . . H C4' .1281(3) -.0052(3) .25192(11) .0794(8) Uani d . 1 . . C H4'1 .2001 -.0486 .2724 .095 Uiso calc R 1 . . H H4'2 .0591 .0182 .2795 .095 Uiso calc R 1 . . H C5' .0699(3) -.0941(2) .20758(10) .0691(7) Uani d . 1 . . C H5'1 .1421 -.1278 .1838 .083 Uiso calc R 1 . . H H5'2 .0273 -.1664 .2268 .083 Uiso calc R 1 . . H C3' .1823(3) .1149(3) .22326(12) .0769(8) Uani d . 1 . . C H3'1 .2078 .1768 .2526 .092 Uiso calc R 1 . . H H3'2 .2625 .0930 .2015 .092 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0665(9) .0484(8) .0643(9) -.0103(7) -.0127(7) .0033(6) O2 .0798(11) .0648(10) .0606(10) -.0112(8) -.0190(8) -.0001(7) O3 .0608(9) .0555(9) .0685(9) -.0158(7) -.0083(7) .0019(7) C1 .0351(8) .0455(10) .0461(10) .0049(7) -.0007(7) -.0013(7) O4 .0646(9) .0662(10) .0676(10) -.0134(7) -.0009(8) .0105(7) C1' .0460(10) .0572(11) .0388(9) .0024(8) .0045(8) .0002(8) C6' .0492(11) .0605(12) .0435(10) -.0025(9) .0076(8) .0061(8) C6 .0367(9) .0469(10) .0540(11) .0013(8) -.0025(8) .0001(8) C2 .0427(9) .0411(10) .0559(11) .0039(7) -.0064(8) .0008(8) C7 .0393(9) .0531(11) .0492(10) .0041(8) .0063(8) -.0016(8) C2' .0568(12) .0601(12) .0439(9) -.0008(9) -.0018(8) -.0006(9) C3 .0675(14) .0544(12) .0555(12) -.0041(10) .0003(10) .0081(9) C4 .0687(13) .0604(13) .0466(10) .0069(11) -.0093(10) .0025(9) C5 .0567(12) .0562(12) .0524(11) .0060(9) -.0078(9) -.0063(9) C4' .0877(18) .0935(19) .0571(13) -.0018(14) -.0199(13) .0212(13) C5' .0796(16) .0706(15) .0572(13) .0047(12) -.0043(12) .0153(11) C3' .0733(16) .0923(18) .0650(14) -.0108(14) -.0251(13) .0136(13) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 C2 . 1.271(2) yes O2 C2' . 1.304(3) yes O2 H2 . .8200 ? O3 C6 . 1.307(2) yes O3 H3 . .8200 ? C1 C6 . 1.377(3) ? C1 C2 . 1.414(3) ? C1 C7 . 1.509(2) ? O4 C6' . 1.256(2) yes C1' C2' . 1.377(3) ? C1' C6' . 1.418(3) ? C1' C7 . 1.512(3) ? C6' C5' . 1.510(3) ? C6 C5 . 1.497(3) ? C2 C3 . 1.496(3) ? C7 H7A . .9700 ? C7 H7B . .9700 ? C2' C3' . 1.496(3) ? C3 C4 . 1.515(3) ? C3 H3A . .9700 ? C3 H3B . .9700 ? C4 C5 . 1.510(3) ? C4 H4A . .9700 ? C4 H4B . .9700 ? C5 H5A . .9700 ? C5 H5B . .9700 ? C4' C5' . 1.500(4) ? C4' C3' . 1.513(4) ? C4' H4'1 . .9700 ? C4' H4'2 . .9700 ? C5' H5'1 . .9700 ? C5' H5'2 . .9700 ? C3' H3'1 . .9700 ? C3' H3'2 . .9700 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0181 .0091 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0492 .0322 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag C2' O2 H2 109.5 ? C6 O3 H3 109.5 ? C6 C1 C2 119.02(17) ? C6 C1 C7 121.77(17) ? C2 C1 C7 119.19(17) ? C2' C1' C6' 119.44(19) ? C2' C1' C7 121.25(18) ? C6' C1' C7 119.28(18) ? O4 C6' C1' 122.41(19) yes O4 C6' C5' 117.72(19) yes C1' C6' C5' 119.82(19) ? O3 C6 C1 123.34(18) yes O3 C6 C5 114.17(17) yes C1 C6 C5 122.48(17) ? O1 C2 C1 121.52(18) yes O1 C2 C3 117.49(18) yes C1 C2 C3 120.94(17) ? C1' C7 C1 117.02(15) ? C1' C7 H7A 108.0 ? C1 C7 H7A 108.0 ? C1' C7 H7B 108.0 ? C1 C7 H7B 108.0 ? H7A C7 H7B 107.3 ? O2 C2' C1' 123.59(19) yes O2 C2' C3' 114.12(19) yes C1' C2' C3' 122.3(2) ? C2 C3 C4 111.43(18) ? C2 C3 H3A 109.3 ? C4 C3 H3A 109.3 ? C2 C3 H3B 109.3 ? C4 C3 H3B 109.3 ? H3A C3 H3B 108.0 ? C3 C4 C5 110.32(17) ? C3 C4 H4A 109.6 ? C5 C4 H4A 109.6 ? C3 C4 H4B 109.6 ? C5 C4 H4B 109.6 ? H4A C4 H4B 108.1 ? C6 C5 C4 111.99(17) ? C6 C5 H5A 109.2 ? C4 C5 H5A 109.2 ? C6 C5 H5B 109.2 ? C4 C5 H5B 109.2 ? H5A C5 H5B 107.9 ? C5' C4' C3' 110.0(2) ? C5' C4' H4'1 109.7 ? C3' C4' H4'1 109.7 ? C5' C4' H4'2 109.7 ? C3' C4' H4'2 109.7 ? H4'1 C4' H4'2 108.2 ? C6' C5' C4' 112.4(2) ? C6' C5' H5'1 109.1 ? C4' C5' H5'1 109.1 ? C6' C5' H5'2 109.1 ? C4' C5' H5'2 109.1 ? H5'1 C5' H5'2 107.9 ? C2' C3' C4' 112.1(2) ? C2' C3' H3'1 109.2 ? C4' C3' H3'1 109.2 ? C2' C3' H3'2 109.2 ? C4' C3' H3'2 109.2 ? H3'1 C3' H3'2 107.9 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag C3 H3B O1 5_565 .97 2.57 3.522(3) 168 yes C5 H5A O1 2_455 .97 2.56 3.371(3) 141 yes C5' H5'1 O2 6_655 .97 2.65 3.525(3) 150 yes C5' H5'2 O2 3_545 .97 2.71 3.477(3) 136 yes O2 H2 O1 . .82 1.78 2.581(2) 165 yes O3 H3 O4 . .82 1.84 2.649(2) 171 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C2' C1' C6' O4 -170.41(18) yes C7 C1' C6' O4 7.8(3) yes C2' C1' C6' C5' 6.9(3) ? C7 C1' C6' C5' -174.98(18) ? C2 C1 C6 O3 169.67(17) yes C7 C1 C6 O3 -8.6(3) yes C2 C1 C6 C5 -9.6(3) ? C7 C1 C6 C5 172.14(17) ? C6 C1 C2 O1 -171.40(17) yes C7 C1 C2 O1 6.9(3) yes C6 C1 C2 C3 6.0(3) ? C7 C1 C2 C3 -175.68(17) ? C2' C1' C7 C1 89.4(2) ? C6' C1' C7 C1 -88.7(2) ? C6 C1 C7 C1' 90.6(2) ? C2 C1 C7 C1' -87.7(2) ? C6' C1' C2' O2 170.75(18) yes C7 C1' C2' O2 -7.4(3) yes C6' C1' C2' C3' -9.1(3) ? C7 C1' C2' C3' 172.8(2) ? O1 C2 C3 C4 -156.59(18) yes C1 C2 C3 C4 25.9(3) yes C2 C3 C4 C5 -53.1(2) ? O3 C6 C5 C4 161.36(17) yes C1 C6 C5 C4 -19.3(3) ? C3 C4 C5 C6 50.0(2) ? O4 C6' C5' C4' -157.6(2) yes C1' C6' C5' C4' 25.0(3) ? C3' C4' C5' C6' -53.0(3) ? O2 C2' C3' C4' 159.6(2) yes C1' C2' C3' C4' -20.6(4) ? C5' C4' C3' C2' 50.7(3) ?