#------------------------------------------------------------------------------ #$Date: 2016-02-19 22:18:51 +0000 (Fri, 19 Feb 2016) $ #$Revision: 176760 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/14/2011469.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011469 loop_ _publ_author_name 'Sakamoto, Jun' 'Nakagawa, Takashi' 'Kanehisa, Nobuko' 'Kai, Yasushi' 'Katsura, Masahiro' _publ_section_title ; 2-Phenylmalonamide ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e485 _journal_page_last e486 _journal_paper_doi 10.1107/S0108270100011938 _journal_volume 56 _journal_year 2000 _chemical_formula_moiety 'C9 H10 N2 O2' _chemical_formula_sum 'C9 H10 N2 O2' _chemical_formula_weight 178.19 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _cell_angle_alpha 90 _cell_angle_beta 104.100(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 9.079(2) _cell_length_b 7.555(2) _cell_length_c 13.015(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296.2 _cell_measurement_theta_max 15.0 _cell_measurement_theta_min 14.6 _cell_volume 865.8(3) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ;MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1990) ; _computing_data_reduction ; TEXSAN (Molecular Structure Corporation & Rigaku Corporation, 1999) ; _computing_publication_material TEXSAN _computing_structure_refinement TEXSAN _computing_structure_solution 'SIR92 (Altomare et al., 1993)' _diffrn_measured_fraction_theta_full .9990 _diffrn_measured_fraction_theta_max .9990 _diffrn_measurement_device_type 'Rigaku AFC-5R' _diffrn_measurement_method \w-2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .7107 _diffrn_reflns_av_R_equivalents .016 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 0 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 2275 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_standards_decay_% 2.00 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .099 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.367 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_size_max .20 _exptl_crystal_size_mid .20 _exptl_crystal_size_min .10 _refine_diff_density_max .54 _refine_diff_density_min -.22 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.231 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 158 _refine_ls_number_reflns 1658 _refine_ls_R_factor_gt .0378 _refine_ls_shift/su_max .0039 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^) + {0.050[Max(Fo^2^,0) + 2Fc^2^]/3}^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .1043 _reflns_number_gt 1347 _reflns_number_total 1994 _reflns_threshold_expression I>2\s(I) _cod_data_source_file qd0028.cif _cod_data_source_block I _cod_original_sg_symbol_H-M 'P 21/n' _cod_database_code 2011469 _cod_database_fobs_code 2011469 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,1/2+y,1/2-z -x,-y,-z 1/2+x,1/2-y,1/2+z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol O(1) -.39870(10) -.0458(2) .14484(9) .0421(3) Uani d . 1.00 . . O O(2) -.06500(10) -.2840(2) .01448(8) .0380(3) Uani d . 1.00 . . O N(1) -.3087(2) -.0668(2) -.00080(10) .0449(4) Uani d . 1.00 . . N N(2) -.0672(2) -.4955(2) .13540(10) .0386(4) Uani d . 1.00 . . N C(1) -.3028(2) -.0996(2) .09980(10) .0294(4) Uani d . 1.00 . . C C(2) -.1680(2) -.2077(2) .16340(10) .0276(4) Uani d . 1.00 . . C C(3) -.0958(2) -.3331(2) .09750(10) .0289(4) Uani d . 1.00 . . C C(4) -.0465(2) -.0843(2) .22790(10) .0294(4) Uani d . 1.00 . . C C(5) -.0096(2) -.0941(3) .33740(10) .0403(5) Uani d . 1.00 . . C C(6) .1028(2) .0151(3) .39680(10) .0495(5) Uani d . 1.00 . . C C(7) .1798(2) .1326(3) .3481(2) .0484(5) Uani d . 1.00 . . C C(8) .1430(2) .1433(3) .2385(2) .0473(5) Uani d . 1.00 . . C C(9) .0297(2) .0362(2) .17900(10) .0396(5) Uani d . 1.00 . . C H(1) -.063(2) -.183(3) .3720(10) .046(5) Uiso calc . 1.00 . . H H(2) .130(3) .006(3) .472(2) .058(6) Uiso calc . 1.00 . . H H(3) .262(3) .208(3) .393(2) .069(7) Uiso calc . 1.00 . . H H(4) .201(2) .228(3) .202(2) .060(6) Uiso calc . 1.00 . . H H(5) .004(2) .044(3) .100(2) .055(6) Uiso calc . 1.00 . . H H(6) -.241(3) -.112(3) -.030(2) .067(7) Uiso calc . 1.00 . . H H(7) -.388(3) -.018(3) -.039(2) .059(6) Uiso calc . 1.00 . . H H(8) -.023(2) -.573(3) .098(2) .047(5) Uiso calc . 1.00 . . H H(9) -.084(2) -.529(2) .202(2) .046(5) Uiso calc . 1.00 . . H H(10) -.208(2) -.276(2) .2100(10) .026(4) Uiso calc . 1.00 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O(1) .0352(6) .0552(8) .0371(7) .0153(5) .0111(5) -.0019(6) O(2) .0473(7) .0384(6) .0331(6) .0114(5) .0192(5) .0053(5) N(1) .0384(8) .0650(10) .0320(8) .0231(8) .0094(6) .0101(7) N(2) .0502(9) .0326(8) .0368(8) .0116(6) .0179(7) .0051(6) C(1) .0274(7) .0295(8) .0308(8) .0017(6) .0063(6) -.0030(6) C(2) .0300(7) .0293(8) .0252(7) .0039(6) .0100(6) .0025(6) C(3) .0271(7) .0322(8) .0273(7) .0026(6) .0064(5) -.0006(6) C(4) .0280(7) .0304(8) .0287(8) .0063(6) .0050(6) -.0017(6) C(5) .0418(9) .0460(10) .0318(8) .0012(8) .0072(7) .0011(7) C(6) .0490(10) .0640(10) .0301(9) .0019(9) -.0009(8) -.0064(9) C(7) .0353(9) .0500(10) .0540(10) .0000(8) .0006(8) -.0117(10) C(8) .0430(10) .0440(10) .0550(10) -.0060(8) .0117(8) -.0002(9) C(9) .0420(9) .0417(10) .0343(9) -.0035(7) .0079(7) .0016(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .003 .002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; H H .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; O O .011 .006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; N N .006 .003 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C(1) N(1) H(6) 1_555 1_555 119.0(10) no C(1) N(1) H(7) 1_555 1_555 119.0(10) no H(6) N(1) H(7) 1_555 1_555 119(2) no C(3) N(2) H(8) 1_555 1_555 118.0(10) no C(3) N(2) H(9) 1_555 1_555 121.0(10) no H(8) N(2) H(9) 1_555 1_555 119.0(10) no O(1) C(1) N(1) 1_555 1_555 123.20(10) no O(1) C(1) C(2) 1_555 1_555 118.90(10) no N(1) C(1) C(2) 1_555 1_555 117.90(10) no C(1) C(2) C(3) 1_555 1_555 115.00(10) yes C(1) C(2) C(4) 1_555 1_555 110.20(10) no C(1) C(2) H(10) 1_555 1_555 104.9(9) no C(3) C(2) C(4) 1_555 1_555 109.60(10) no C(3) C(2) H(10) 1_555 1_555 108.2(10) no C(4) C(2) H(10) 1_555 1_555 108.7(9) no O(2) C(3) N(2) 1_555 1_555 122.50(10) no O(2) C(3) C(2) 1_555 1_555 121.60(10) no N(2) C(3) C(2) 1_555 1_555 115.90(10) no C(2) C(4) C(5) 1_555 1_555 119.60(10) no C(2) C(4) C(9) 1_555 1_555 121.40(10) no C(5) C(4) C(9) 1_555 1_555 119.0(2) no C(4) C(5) C(6) 1_555 1_555 120.1(2) no C(4) C(5) H(1) 1_555 1_555 118.0(10) no C(6) C(5) H(1) 1_555 1_555 121.0(10) no C(5) C(6) C(7) 1_555 1_555 120.9(2) no C(5) C(6) H(2) 1_555 1_555 120.0(10) no C(7) C(6) H(2) 1_555 1_555 119.0(10) no C(6) C(7) C(8) 1_555 1_555 119.3(2) no C(6) C(7) H(3) 1_555 1_555 119.0(10) no C(8) C(7) H(3) 1_555 1_555 121.0(10) no C(7) C(8) C(9) 1_555 1_555 120.1(2) no C(7) C(8) H(4) 1_555 1_555 119.0(10) no C(9) C(8) H(4) 1_555 1_555 120.0(10) no C(4) C(9) C(8) 1_555 1_555 120.7(2) no C(4) C(9) H(5) 1_555 1_555 119.0(10) no C(8) C(9) H(5) 1_555 1_555 119.0(10) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O(1) C(1) . . 1.230(2) yes O(2) C(3) . . 1.237(2) yes N(1) C(1) . . 1.321(2) yes N(1) H(6) . . .87(2) no N(1) H(7) . . .85(2) no N(2) C(3) . . 1.324(2) yes N(2) H(8) . . .91(2) no N(2) H(9) . . .94(2) no C(1) C(2) . . 1.535(2) yes C(2) C(3) . . 1.528(2) yes C(2) C(4) . . 1.530(2) yes C(2) H(10) . . .94(2) no C(4) C(5) . . 1.384(2) no C(4) C(9) . . 1.388(2) no C(5) C(6) . . 1.391(3) no C(5) H(1) . . 1.00(2) no C(6) C(7) . . 1.376(3) no C(6) H(2) . . .96(2) no C(7) C(8) . . 1.385(3) no C(7) H(3) . . 1.00(2) no C(8) C(9) . . 1.388(3) no C(8) H(4) . . 1.02(2) no C(9) H(5) . . 1.00(2) no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 O(1) H(1) 2.76(2) 2_455 O(1) H(10) 2.79(2) 2_455 O(1) N(2) 2.975(2) 2_455 O(1) N(1) 2.978(2) 3_455 O(1) H(6) 3.46(2) 3_455 O(1) C(2) 3.520(2) 2_455 O(1) C(5) 3.534(2) 2_455 O(1) C(7) 3.541(2) 2_445 O(1) H(8) 3.59(2) 2_455 O(2) H(3) 2.72(2) 2_545 O(2) H(4) 2.82(2) 3_555 O(2) N(2) 3.027(2) 3_545 O(2) H(2) 3.17(2) 4_444 O(2) C(9) 3.216(2) 3_555 O(2) C(8) 3.367(2) 3_555 O(2) C(6) 3.498(2) 4_444 O(2) O(2) 3.522(2) 3_545 O(2) C(7) 3.575(2) 2_545 N(1) H(7) 3.00(2) 3_455 N(1) H(1) 3.13(2) 4_444 N(1) H(3) 3.18(2) 4_454 N(1) H(4) 3.24(2) 3_555 N(1) H(5) 3.33(2) 3_555 N(1) H(2) 3.37(2) 4_444 N(1) C(5) 3.529(3) 4_444 N(2) H(2) 3.04(2) 4_444 N(2) H(4) 3.17(2) 1_545 N(2) H(3) 3.27(2) 2_545 N(2) H(8) 3.38(2) 3_545 N(2) C(8) 3.412(3) 1_545 N(2) H(3) 3.54(2) 4_444 N(2) H(5) 3.59(2) 1_545 C(1) H(7) 2.87(2) 3_455 C(1) H(9) 3.05(2) 2_455 C(1) H(1) 3.42(2) 2_455 C(1) H(10) 3.46(2) 2_455 C(1) H(2) 3.47(2) 4_444 C(2) H(9) 3.45(2) 2_455 C(2) H(2) 3.52(2) 4_444 C(3) H(2) 2.93(2) 4_444 C(3) H(3) 3.02(2) 2_545 C(3) H(8) 3.09(2) 3_545 C(3) C(6) 3.567(2) 4_444 C(4) H(4) 3.36(2) 2_545 C(4) H(10) 3.45(2) 2_455 C(5) H(2) 3.02(2) 3_556 C(5) H(4) 3.25(2) 2_545 C(5) H(7) 3.40(2) 4_545 C(5) H(6) 3.44(2) 4_545 C(5) H(10) 3.46(2) 2_455 C(6) H(2) 3.03(2) 3_556 C(6) H(4) 3.26(2) 2_545 C(6) H(1) 3.37(2) 3_556 C(6) H(6) 3.40(2) 4_545 C(7) H(4) 3.36(2) 2_545 C(7) H(7) 3.38(2) 4_555 C(7) H(8) 3.40(2) 2_555 C(8) H(8) 2.98(2) 1_565 C(8) H(6) 3.07(2) 3_555 C(8) H(9) 3.18(2) 1_565 C(8) H(4) 3.45(2) 2_545 C(9) H(6) 3.10(2) 3_555 C(9) H(8) 3.13(2) 1_565 C(9) H(3) 3.39(2) 2_545 C(9) H(4) 3.46(2) 2_545 C(9) H(9) 3.48(2) 1_565 H(1) H(2) 2.62(3) 3_556 H(1) H(7) 2.84(3) 4_545 H(1) H(6) 3.28(3) 4_545 H(1) H(9) 3.32(3) 2_455 H(1) H(7) 3.44(3) 2_445 H(2) H(2) 2.63(4) 3_556 H(2) H(6) 3.20(3) 4_545 H(2) H(8) 3.21(3) 4_545 H(2) H(9) 3.45(3) 4_545 H(2) H(10) 3.54(3) 4_545 H(3) H(7) 2.95(3) 4_555 H(3) H(8) 3.08(3) 4_545 H(3) H(8) 3.16(3) 2_555 H(3) H(6) 3.21(3) 4_555 H(3) H(5) 3.30(3) 2_555 H(3) H(5) 3.57(3) 4_555 H(4) H(6) 2.51(3) 3_555 H(4) H(8) 2.63(3) 1_565 H(4) H(9) 3.17(3) 1_565 H(4) H(7) 3.40(3) 3_555 H(5) H(6) 2.59(3) 3_555 H(5) H(5) 2.68(4) 3_555 H(5) H(8) 2.90(3) 1_565 H(7) H(7) 2.51(5) 3_455 H(7) H(9) 3.43(3) 4_444 H(8) H(8) 2.91(4) 3_545 H(9) H(10) 3.07(3) 2_445 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H6 O2 . .87(3) 2.03(3) 2.723(2) 136(2) yes N1 H7 O1 3_455 .85(3) 2.14(3) 2.978(2) 167(2) yes N2 H8 O2 3_545 .91(2) 2.13(2) 3.027(2) 168(2) yes N2 H9 O1 2_445 .95(2) 2.04(2) 2.9753(19) 167.1(15) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag O(1) C(1) C(2) C(3) 1_555 1_555 1_555 1_555 154.60(10) no O(1) C(1) C(2) C(4) 1_555 1_555 1_555 1_555 -80.9(2) no O(2) C(3) C(2) C(1) 1_555 1_555 1_555 1_555 46.6(2) no O(2) C(3) C(2) C(4) 1_555 1_555 1_555 1_555 -78.2(2) no N(1) C(1) C(2) C(3) 1_555 1_555 1_555 1_555 -26.2(2) no N(1) C(1) C(2) C(4) 1_555 1_555 1_555 1_555 98.2(2) no N(2) C(3) C(2) C(1) 1_555 1_555 1_555 1_555 -134.10(10) no N(2) C(3) C(2) C(4) 1_555 1_555 1_555 1_555 101.1(2) no C(1) C(2) C(4) C(5) 1_555 1_555 1_555 1_555 117.3(2) no C(1) C(2) C(4) C(9) 1_555 1_555 1_555 1_555 -63.7(2) no C(2) C(4) C(5) C(6) 1_555 1_555 1_555 1_555 178.7(2) no C(2) C(4) C(9) C(8) 1_555 1_555 1_555 1_555 -178.0(2) no C(3) C(2) C(4) C(5) 1_555 1_555 1_555 1_555 -115.30(10) no C(3) C(2) C(4) C(9) 1_555 1_555 1_555 1_555 63.8(2) no C(4) C(5) C(6) C(7) 1_555 1_555 1_555 1_555 -.6(3) no C(4) C(9) C(8) C(7) 1_555 1_555 1_555 1_555 -.9(3) no C(5) C(4) C(9) C(8) 1_555 1_555 1_555 1_555 1.1(3) no C(5) C(6) C(7) C(8) 1_555 1_555 1_555 1_555 .8(3) no C(6) C(5) C(4) C(9) 1_555 1_555 1_555 1_555 -.3(2) no C(6) C(7) C(8) C(9) 1_555 1_555 1_555 1_555 .0(3) no