#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2011469.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011469 loop_ _publ_author_name 'Sakamoto, Jun' 'Nakagawa, Takashi' 'Kanehisa, Nobuko' 'Kai, Yasushi' 'Katsura, Masahiro' _publ_section_title ; 2-Phenylmalonamide ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e485 _journal_page_last e486 _journal_volume 56 _journal_year 2000 _chemical_formula_moiety 'C9 H10 N2 O2' _chemical_formula_sum 'C9 H10 N2 O2' _chemical_formula_weight 178.19 _space_group_IT_number 14 _symmetry_cell_setting monoclinic _symmetry_space_group_name_Hall '-P 2yn' _symmetry_space_group_name_H-M 'P 1 21/n 1' _cell_angle_alpha 90 _cell_angle_beta 104.100(10) _cell_angle_gamma 90 _cell_formula_units_Z 4 _cell_length_a 9.079(2) _cell_length_b 7.555(2) _cell_length_c 13.015(2) _cell_measurement_reflns_used 25 _cell_measurement_temperature 296.2 _cell_measurement_theta_max 15.0 _cell_measurement_theta_min 14.6 _cell_volume 865.8(3) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1990) ; _computing_data_reduction ; TEXSAN (Molecular Structure Corporation & Rigaku Corporation, 1999) ; _computing_publication_material TEXSAN _computing_structure_refinement TEXSAN _computing_structure_solution 'SIR92 (Altomare et al., 1993)' _diffrn_measured_fraction_theta_full .9990 _diffrn_measured_fraction_theta_max .9990 _diffrn_measurement_device_type 'Rigaku AFC-5R' _diffrn_measurement_method \w-2\q _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .7107 _diffrn_reflns_av_R_equivalents .016 _diffrn_reflns_limit_h_max 11 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 0 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 16 _diffrn_reflns_limit_l_min -16 _diffrn_reflns_number 2275 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_standards_decay_% 2.00 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .099 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.367 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prismatic _exptl_crystal_size_max .20 _exptl_crystal_size_mid .20 _exptl_crystal_size_min .10 _refine_diff_density_max .54 _refine_diff_density_min -.22 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.231 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 158 _refine_ls_number_reflns 1658 _refine_ls_R_factor_gt .0378 _refine_ls_shift/su_max .0039 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^) + {0.050[Max(Fo^2^,0) + 2Fc^2^]/3}^2^]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .1043 _reflns_number_gt 1347 _reflns_number_total 1994 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file qd0028.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M 'P 21/n' _cod_database_code 2011469 loop_ _symmetry_equiv_pos_as_xyz x,y,z 1/2-x,1/2+y,1/2-z -x,-y,-z 1/2+x,1/2-y,1/2+z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_occupancy _atom_site_type_symbol O(1) -.39870(10) -.0458(2) .14484(9) .0421(3) Uani d 1.00 O O(2) -.06500(10) -.2840(2) .01448(8) .0380(3) Uani d 1.00 O N(1) -.3087(2) -.0668(2) -.00080(10) .0449(4) Uani d 1.00 N N(2) -.0672(2) -.4955(2) .13540(10) .0386(4) Uani d 1.00 N C(1) -.3028(2) -.0996(2) .09980(10) .0294(4) Uani d 1.00 C C(2) -.1680(2) -.2077(2) .16340(10) .0276(4) Uani d 1.00 C C(3) -.0958(2) -.3331(2) .09750(10) .0289(4) Uani d 1.00 C C(4) -.0465(2) -.0843(2) .22790(10) .0294(4) Uani d 1.00 C C(5) -.0096(2) -.0941(3) .33740(10) .0403(5) Uani d 1.00 C C(6) .1028(2) .0151(3) .39680(10) .0495(5) Uani d 1.00 C C(7) .1798(2) .1326(3) .3481(2) .0484(5) Uani d 1.00 C C(8) .1430(2) .1433(3) .2385(2) .0473(5) Uani d 1.00 C C(9) .0297(2) .0362(2) .17900(10) .0396(5) Uani d 1.00 C H(1) -.063(2) -.183(3) .3720(10) .046(5) Uiso calc 1.00 H H(2) .130(3) .006(3) .472(2) .058(6) Uiso calc 1.00 H H(3) .262(3) .208(3) .393(2) .069(7) Uiso calc 1.00 H H(4) .201(2) .228(3) .202(2) .060(6) Uiso calc 1.00 H H(5) .004(2) .044(3) .100(2) .055(6) Uiso calc 1.00 H H(6) -.241(3) -.112(3) -.030(2) .067(7) Uiso calc 1.00 H H(7) -.388(3) -.018(3) -.039(2) .059(6) Uiso calc 1.00 H H(8) -.023(2) -.573(3) .098(2) .047(5) Uiso calc 1.00 H H(9) -.084(2) -.529(2) .202(2) .046(5) Uiso calc 1.00 H H(10) -.208(2) -.276(2) .2100(10) .026(4) Uiso calc 1.00 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O(1) .0352(6) .0552(8) .0371(7) .0153(5) .0111(5) -.0019(6) O(2) .0473(7) .0384(6) .0331(6) .0114(5) .0192(5) .0053(5) N(1) .0384(8) .0650(10) .0320(8) .0231(8) .0094(6) .0101(7) N(2) .0502(9) .0326(8) .0368(8) .0116(6) .0179(7) .0051(6) C(1) .0274(7) .0295(8) .0308(8) .0017(6) .0063(6) -.0030(6) C(2) .0300(7) .0293(8) .0252(7) .0039(6) .0100(6) .0025(6) C(3) .0271(7) .0322(8) .0273(7) .0026(6) .0064(5) -.0006(6) C(4) .0280(7) .0304(8) .0287(8) .0063(6) .0050(6) -.0017(6) C(5) .0418(9) .0460(10) .0318(8) .0012(8) .0072(7) .0011(7) C(6) .0490(10) .0640(10) .0301(9) .0019(9) -.0009(8) -.0064(9) C(7) .0353(9) .0500(10) .0540(10) .0000(8) .0006(8) -.0117(10) C(8) .0430(10) .0440(10) .0550(10) -.0060(8) .0117(8) -.0002(9) C(9) .0420(9) .0417(10) .0343(9) -.0035(7) .0079(7) .0016(7) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .003 .002 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; H H .000 .000 ;International Tables for Crystallography (1992, Vol. C, Table 6.1.1.2) ; O O .011 .006 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; N N .006 .003 ;International Tables for Crystallography (1992, Vol. C, Tables 4.2.6.8 and 6.1.1.1) ; loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_2 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag C(1) N(1) H(6) 1_555 1_555 119.0(10) no C(1) N(1) H(7) 1_555 1_555 119.0(10) no H(6) N(1) H(7) 1_555 1_555 119(2) no C(3) N(2) H(8) 1_555 1_555 118.0(10) no C(3) N(2) H(9) 1_555 1_555 121.0(10) no H(8) N(2) H(9) 1_555 1_555 119.0(10) no O(1) C(1) N(1) 1_555 1_555 123.20(10) no O(1) C(1) C(2) 1_555 1_555 118.90(10) no N(1) C(1) C(2) 1_555 1_555 117.90(10) no C(1) C(2) C(3) 1_555 1_555 115.00(10) yes C(1) C(2) C(4) 1_555 1_555 110.20(10) no C(1) C(2) H(10) 1_555 1_555 104.9(9) no C(3) C(2) C(4) 1_555 1_555 109.60(10) no C(3) C(2) H(10) 1_555 1_555 108.2(10) no C(4) C(2) H(10) 1_555 1_555 108.7(9) no O(2) C(3) N(2) 1_555 1_555 122.50(10) no O(2) C(3) C(2) 1_555 1_555 121.60(10) no N(2) C(3) C(2) 1_555 1_555 115.90(10) no C(2) C(4) C(5) 1_555 1_555 119.60(10) no C(2) C(4) C(9) 1_555 1_555 121.40(10) no C(5) C(4) C(9) 1_555 1_555 119.0(2) no C(4) C(5) C(6) 1_555 1_555 120.1(2) no C(4) C(5) H(1) 1_555 1_555 118.0(10) no C(6) C(5) H(1) 1_555 1_555 121.0(10) no C(5) C(6) C(7) 1_555 1_555 120.9(2) no C(5) C(6) H(2) 1_555 1_555 120.0(10) no C(7) C(6) H(2) 1_555 1_555 119.0(10) no C(6) C(7) C(8) 1_555 1_555 119.3(2) no C(6) C(7) H(3) 1_555 1_555 119.0(10) no C(8) C(7) H(3) 1_555 1_555 121.0(10) no C(7) C(8) C(9) 1_555 1_555 120.1(2) no C(7) C(8) H(4) 1_555 1_555 119.0(10) no C(9) C(8) H(4) 1_555 1_555 120.0(10) no C(4) C(9) C(8) 1_555 1_555 120.7(2) no C(4) C(9) H(5) 1_555 1_555 119.0(10) no C(8) C(9) H(5) 1_555 1_555 119.0(10) no loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O(1) C(1) 1.230(2) yes O(2) C(3) 1.237(2) yes N(1) C(1) 1.321(2) yes N(1) H(6) .87(2) no N(1) H(7) .85(2) no N(2) C(3) 1.324(2) yes N(2) H(8) .91(2) no N(2) H(9) .94(2) no C(1) C(2) 1.535(2) yes C(2) C(3) 1.528(2) yes C(2) C(4) 1.530(2) yes C(2) H(10) .94(2) no C(4) C(5) 1.384(2) no C(4) C(9) 1.388(2) no C(5) C(6) 1.391(3) no C(5) H(1) 1.00(2) no C(6) C(7) 1.376(3) no C(6) H(2) .96(2) no C(7) C(8) 1.385(3) no C(7) H(3) 1.00(2) no C(8) C(9) 1.388(3) no C(8) H(4) 1.02(2) no C(9) H(5) 1.00(2) no loop_ _geom_contact_atom_site_label_1 _geom_contact_atom_site_label_2 _geom_contact_distance _geom_contact_site_symmetry_2 O(1) H(1) 2.76(2) 2_455 O(1) H(10) 2.79(2) 2_455 O(1) N(2) 2.975(2) 2_455 O(1) N(1) 2.978(2) 3_455 O(1) H(6) 3.46(2) 3_455 O(1) C(2) 3.520(2) 2_455 O(1) C(5) 3.534(2) 2_455 O(1) C(7) 3.541(2) 2_445 O(1) H(8) 3.59(2) 2_455 O(2) H(3) 2.72(2) 2_545 O(2) H(4) 2.82(2) 3_555 O(2) N(2) 3.027(2) 3_545 O(2) H(2) 3.17(2) 4_444 O(2) C(9) 3.216(2) 3_555 O(2) C(8) 3.367(2) 3_555 O(2) C(6) 3.498(2) 4_444 O(2) O(2) 3.522(2) 3_545 O(2) C(7) 3.575(2) 2_545 N(1) H(7) 3.00(2) 3_455 N(1) H(1) 3.13(2) 4_444 N(1) H(3) 3.18(2) 4_454 N(1) H(4) 3.24(2) 3_555 N(1) H(5) 3.33(2) 3_555 N(1) H(2) 3.37(2) 4_444 N(1) C(5) 3.529(3) 4_444 N(2) H(2) 3.04(2) 4_444 N(2) H(4) 3.17(2) 1_545 N(2) H(3) 3.27(2) 2_545 N(2) H(8) 3.38(2) 3_545 N(2) C(8) 3.412(3) 1_545 N(2) H(3) 3.54(2) 4_444 N(2) H(5) 3.59(2) 1_545 C(1) H(7) 2.87(2) 3_455 C(1) H(9) 3.05(2) 2_455 C(1) H(1) 3.42(2) 2_455 C(1) H(10) 3.46(2) 2_455 C(1) H(2) 3.47(2) 4_444 C(2) H(9) 3.45(2) 2_455 C(2) H(2) 3.52(2) 4_444 C(3) H(2) 2.93(2) 4_444 C(3) H(3) 3.02(2) 2_545 C(3) H(8) 3.09(2) 3_545 C(3) C(6) 3.567(2) 4_444 C(4) H(4) 3.36(2) 2_545 C(4) H(10) 3.45(2) 2_455 C(5) H(2) 3.02(2) 3_556 C(5) H(4) 3.25(2) 2_545 C(5) H(7) 3.40(2) 4_545 C(5) H(6) 3.44(2) 4_545 C(5) H(10) 3.46(2) 2_455 C(6) H(2) 3.03(2) 3_556 C(6) H(4) 3.26(2) 2_545 C(6) H(1) 3.37(2) 3_556 C(6) H(6) 3.40(2) 4_545 C(7) H(4) 3.36(2) 2_545 C(7) H(7) 3.38(2) 4_555 C(7) H(8) 3.40(2) 2_555 C(8) H(8) 2.98(2) 1_565 C(8) H(6) 3.07(2) 3_555 C(8) H(9) 3.18(2) 1_565 C(8) H(4) 3.45(2) 2_545 C(9) H(6) 3.10(2) 3_555 C(9) H(8) 3.13(2) 1_565 C(9) H(3) 3.39(2) 2_545 C(9) H(4) 3.46(2) 2_545 C(9) H(9) 3.48(2) 1_565 H(1) H(2) 2.62(3) 3_556 H(1) H(7) 2.84(3) 4_545 H(1) H(6) 3.28(3) 4_545 H(1) H(9) 3.32(3) 2_455 H(1) H(7) 3.44(3) 2_445 H(2) H(2) 2.63(4) 3_556 H(2) H(6) 3.20(3) 4_545 H(2) H(8) 3.21(3) 4_545 H(2) H(9) 3.45(3) 4_545 H(2) H(10) 3.54(3) 4_545 H(3) H(7) 2.95(3) 4_555 H(3) H(8) 3.08(3) 4_545 H(3) H(8) 3.16(3) 2_555 H(3) H(6) 3.21(3) 4_555 H(3) H(5) 3.30(3) 2_555 H(3) H(5) 3.57(3) 4_555 H(4) H(6) 2.51(3) 3_555 H(4) H(8) 2.63(3) 1_565 H(4) H(9) 3.17(3) 1_565 H(4) H(7) 3.40(3) 3_555 H(5) H(6) 2.59(3) 3_555 H(5) H(5) 2.68(4) 3_555 H(5) H(8) 2.90(3) 1_565 H(7) H(7) 2.51(5) 3_455 H(7) H(9) 3.43(3) 4_444 H(8) H(8) 2.91(4) 3_545 H(9) H(10) 3.07(3) 2_445 loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N1 H6 O2 . .87(3) 2.03(3) 2.723(2) 136(2) yes N1 H7 O1 3_455 .85(3) 2.14(3) 2.978(2) 167(2) yes N2 H8 O2 3_545 .91(2) 2.13(2) 3.027(2) 168(2) yes N2 H9 O1 2_445 .95(2) 2.04(2) 2.9753(19) 167.1(15) yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion _geom_torsion_publ_flag O(1) C(1) C(2) C(3) 1_555 1_555 1_555 1_555 154.60(10) no O(1) C(1) C(2) C(4) 1_555 1_555 1_555 1_555 -80.9(2) no O(2) C(3) C(2) C(1) 1_555 1_555 1_555 1_555 46.6(2) no O(2) C(3) C(2) C(4) 1_555 1_555 1_555 1_555 -78.2(2) no N(1) C(1) C(2) C(3) 1_555 1_555 1_555 1_555 -26.2(2) no N(1) C(1) C(2) C(4) 1_555 1_555 1_555 1_555 98.2(2) no N(2) C(3) C(2) C(1) 1_555 1_555 1_555 1_555 -134.10(10) no N(2) C(3) C(2) C(4) 1_555 1_555 1_555 1_555 101.1(2) no C(1) C(2) C(4) C(5) 1_555 1_555 1_555 1_555 117.3(2) no C(1) C(2) C(4) C(9) 1_555 1_555 1_555 1_555 -63.7(2) no C(2) C(4) C(5) C(6) 1_555 1_555 1_555 1_555 178.7(2) no C(2) C(4) C(9) C(8) 1_555 1_555 1_555 1_555 -178.0(2) no C(3) C(2) C(4) C(5) 1_555 1_555 1_555 1_555 -115.30(10) no C(3) C(2) C(4) C(9) 1_555 1_555 1_555 1_555 63.8(2) no C(4) C(5) C(6) C(7) 1_555 1_555 1_555 1_555 -.6(3) no C(4) C(9) C(8) C(7) 1_555 1_555 1_555 1_555 -.9(3) no C(5) C(4) C(9) C(8) 1_555 1_555 1_555 1_555 1.1(3) no C(5) C(6) C(7) C(8) 1_555 1_555 1_555 1_555 .8(3) no C(6) C(5) C(4) C(9) 1_555 1_555 1_555 1_555 -.3(2) no C(6) C(7) C(8) C(9) 1_555 1_555 1_555 1_555 .0(3) no