#------------------------------------------------------------------------------ #$Date: 2013-08-29 16:37:19 +0100 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/14/2011473.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011473 loop_ _publ_author_name 'Kang, Jun-Gill' 'Hong, Jung-Pyo' 'Kang, Sung Kwon' _publ_section_title ; Sodium hydrogen nitrilotriacetate dihydrate ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first e432 _journal_page_last e433 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac 'Na 1+, C6 H8 N O6 1-, 2H2 O' _chemical_formula_moiety 'Na 1+, C6 H8 N O6 1-, 2(H2 O)' _chemical_formula_sum 'C6 H12 N Na O8' _chemical_formula_weight 249.16 _chemical_name_systematic ; Sodium \a-hydronitrilotriacetate dihydrate ; _space_group_IT_number 61 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall '-P 2ac 2ab' _symmetry_space_group_name_H-M 'P b c a' _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 8 _cell_length_a 5.8620(19) _cell_length_b 12.3986(16) _cell_length_c 26.854(3) _cell_measurement_reflns_used 42 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 12.57 _cell_measurement_theta_min 6.75 _cell_volume 1951.8(7) _computing_cell_refinement XSCANS _computing_data_collection 'XSCANS (Siemens, 1996)' _computing_data_reduction 'SHELXTL (Siemens, 1997)' _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full .861 _diffrn_measured_fraction_theta_max .861 _diffrn_measurement_device_type 'Bruker P4' _diffrn_measurement_method 2\q/\w _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .035 _diffrn_reflns_av_sigmaI/netI .046 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 16 _diffrn_reflns_limit_k_min -16 _diffrn_reflns_limit_l_max 34 _diffrn_reflns_limit_l_min -34 _diffrn_reflns_number 4474 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 3.03 _diffrn_standards_decay_% 3.0 _diffrn_standards_interval_count 97 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .193 _exptl_absorpt_correction_T_max .981 _exptl_absorpt_correction_T_min .873 _exptl_absorpt_correction_type '\y scan' _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour Colourless _exptl_crystal_density_diffrn 1.696 _exptl_crystal_density_method 'not measured' _exptl_crystal_description Needle _exptl_crystal_F_000 1040 _exptl_crystal_size_max .40 _exptl_crystal_size_mid .15 _exptl_crystal_size_min .10 _refine_diff_density_max .262 _refine_diff_density_min -.305 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.047 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 169 _refine_ls_number_reflns 2239 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.047 _refine_ls_R_factor_all .056 _refine_ls_R_factor_gt .038 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w = 1/[\s^2^(Fo^2^)+(0.0544P)^2^+0.3629P] where P = (Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .109 _reflns_number_gt 1731 _reflns_number_total 2239 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file qd0035.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2011473 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' '-x, -y, -z' 'x-1/2, y, -z-1/2' 'x, -y-1/2, z-1/2' '-x-1/2, y-1/2, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Na1 .24682(13) .53495(6) .03123(3) .0303(2) Uani d . 1 . . Na N1 .1742(3) .69269(11) .15172(5) .0175(3) Uani d . 1 . . N OW1 .0995(3) .37426(11) -.00484(6) .0314(3) Uani d . 1 . . O OW2 .3847(3) .56365(15) -.05472(6) .0400(4) Uani d . 1 . . O O1 .3778(2) .70744(12) .06396(5) .0298(3) Uani d . 1 . . O O2 .7320(2) .71312(13) .09511(5) .0324(3) Uani d . 1 . . O O3 .0453(3) .50908(10) .10571(5) .0302(3) Uani d . 1 . . O O4 -.1266(2) .44076(11) .17261(5) .0302(3) Uani d . 1 . . O O5 .1241(2) .92952(9) .23208(5) .0236(3) Uani d . 1 . . O O6 .2442(2) .76159(9) .24822(5) .0236(3) Uani d . 1 . . O C1 .4274(3) .67261(15) .15004(6) .0228(4) Uani d . 1 . . C H1A .4581 .5973 .1571 .027 Uiso calc R 1 . . H H1B .5027 .7159 .1752 .027 Uiso calc R 1 . . H C2 .5209(3) .70163(14) .09849(6) .0222(4) Uani d . 1 . . C C3 .0433(3) .61089(13) .18141(6) .0201(3) Uani d . 1 . . C H3A -.0959 .6435 .1938 .024 Uiso calc R 1 . . H H3B .1339 .5886 .2098 .024 Uiso calc R 1 . . H C4 -.0164(3) .51239(13) .15009(6) .0205(3) Uani d . 1 . . C C5 .1186(3) .80642(13) .16581(6) .0202(4) Uani d . 1 . . C H5A -.0419 .8198 .1596 .024 Uiso calc R 1 . . H H5B .2063 .8554 .1451 .024 Uiso calc R 1 . . H C6 .1704(3) .82886(13) .21995(6) .0188(3) Uani d . 1 . . C HN1 .126(4) .6857(18) .1193(9) .031(6) Uiso d . 1 . . H HO5 .134(5) .934(3) .2696(12) .079(10) Uiso d . 1 . . H HW1 .147(4) .347(2) -.0330(10) .040(7) Uiso d . 1 . . H HW2 .088(5) .324(2) .0178(11) .054(8) Uiso d . 1 . . H HW3 .264(6) .542(2) -.0727(11) .056(9) Uiso d . 1 . . H HW4 .398(7) .629(4) -.0572(15) .107(15) Uiso d . 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Na1 .0331(4) .0315(4) .0262(4) -.0034(3) .0023(3) -.0045(3) N1 .0205(7) .0159(7) .0161(7) -.0003(5) .0001(5) -.0003(5) OW1 .0428(8) .0254(7) .0259(7) .0019(6) .0050(6) .0001(6) OW2 .0421(10) .0408(9) .0371(9) -.0030(8) -.0012(7) .0031(7) O1 .0317(7) .0356(7) .0222(6) -.0068(6) -.0024(6) .0028(5) O2 .0248(7) .0421(8) .0303(7) -.0011(6) .0063(6) -.0038(6) O3 .0453(8) .0236(6) .0216(6) -.0048(6) .0072(6) -.0033(5) O4 .0406(8) .0232(6) .0269(7) -.0125(6) .0036(6) .0004(5) O5 .0279(7) .0163(6) .0267(6) .0007(5) .0009(5) -.0029(5) O6 .0256(6) .0211(6) .0242(6) .0014(5) -.0053(5) .0007(5) C1 .0202(9) .0250(9) .0231(9) .0035(7) .0005(7) .0001(7) C2 .0250(9) .0179(8) .0235(8) -.0006(7) .0033(7) -.0041(6) C3 .0246(8) .0154(7) .0204(8) -.0023(7) .0038(7) .0004(6) C4 .0217(8) .0166(8) .0232(8) .0010(6) .0014(7) .0002(6) C5 .0242(9) .0135(7) .0230(8) .0007(6) -.0013(7) .0011(6) C6 .0159(7) .0164(7) .0241(8) -.0029(6) .0002(6) -.0013(6) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Na1 O3 . 2.3450(15) yes Na1 OW1 . 2.3778(16) yes Na1 OW1 5_565 2.4271(18) yes Na1 O1 . 2.4362(16) yes Na1 OW2 . 2.4712(18) yes Na1 OW2 5_665 2.561(2) yes Na1 Na1 5_565 3.4552(17) no Na1 Na1 5_665 3.5179(17) no N1 C5 . 1.496(2) no N1 C3 . 1.501(2) no N1 C1 . 1.505(2) no OW1 Na1 5_565 2.4271(18) no OW2 Na1 5_665 2.561(2) no O1 C2 . 1.253(2) no O2 C2 . 1.249(2) no O3 C4 . 1.246(2) no O4 C4 . 1.254(2) no O5 C6 . 1.318(2) no O6 C6 . 1.208(2) no C1 C2 . 1.532(2) no C3 C4 . 1.524(2) no C5 C6 . 1.511(2) no loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Na Na .0362 .0249 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O3 Na1 OW1 . . 92.86(6) yes O3 Na1 OW1 . 5_565 83.74(6) yes OW1 Na1 OW1 . 5_565 88.04(6) yes O3 Na1 O1 . . 88.35(5) yes OW1 Na1 O1 . . 175.53(6) yes OW1 Na1 O1 5_565 . 87.81(6) yes O3 Na1 OW2 . . 168.83(7) yes OW1 Na1 OW2 . . 81.89(6) yes OW1 Na1 OW2 5_565 . 86.22(6) yes O1 Na1 OW2 . . 96.17(6) yes O3 Na1 OW2 . 5_665 98.61(6) yes OW1 Na1 OW2 . 5_665 90.38(6) yes OW1 Na1 OW2 5_565 5_665 177.24(6) yes O1 Na1 OW2 . 5_665 93.69(6) yes OW2 Na1 OW2 . 5_665 91.31(6) yes O3 Na1 Na1 . 5_565 87.58(5) no OW1 Na1 Na1 . 5_565 44.59(4) no OW1 Na1 Na1 5_565 5_565 43.45(4) no O1 Na1 Na1 . 5_565 131.24(5) no OW2 Na1 Na1 . 5_565 81.75(5) no OW2 Na1 Na1 5_665 5_565 134.93(6) no O3 Na1 Na1 . 5_665 142.95(6) no OW1 Na1 Na1 . 5_665 84.59(5) no OW1 Na1 Na1 5_565 5_665 132.91(5) no O1 Na1 Na1 . 5_665 97.03(5) no OW2 Na1 Na1 . 5_665 46.70(4) no OW2 Na1 Na1 5_665 5_665 44.61(4) no Na1 Na1 Na1 5_565 5_665 114.42(4) no C5 N1 C3 . . 113.02(13) no C5 N1 C1 . . 112.22(13) no C3 N1 C1 . . 114.09(13) no Na1 OW1 Na1 . 5_565 91.96(6) yes Na1 OW2 Na1 . 5_665 88.69(6) yes C2 O1 Na1 . . 115.32(12) yes C4 O3 Na1 . . 163.21(13) yes N1 C1 C2 . . 109.94(14) no O2 C2 O1 . . 127.10(17) no O2 C2 C1 . . 116.57(16) no O1 C2 C1 . . 116.28(16) no N1 C3 C4 . . 111.45(13) no O3 C4 O4 . . 125.98(16) no O3 C4 C3 . . 119.19(15) no O4 C4 C3 . . 114.83(14) no N1 C5 C6 . . 111.92(13) no O6 C6 O5 . . 124.90(16) no O6 C6 C5 . . 123.34(15) no O5 C6 C5 . . 111.76(14) no _cod_database_fobs_code 2011473