#------------------------------------------------------------------------------ #$Date: 2013-08-29 16:37:19 +0100 (Thu, 29 Aug 2013) $ #$Revision: 88064 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/15/2011590.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2011590 loop_ _publ_author_name 'Okabe, Nobuo' 'Tsujita, Michihiro' _publ_section_title catena-Poly[[diaqualithium(I)]-\m-[9H-purine-2,6(1H,3H)-dionato-O^2^:N^7^]] _journal_issue 12 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1418 _journal_page_last 1419 _journal_volume 56 _journal_year 2000 _chemical_formula_iupac '[Li (C5 H3 N4 O2 )(H2 O)2]' _chemical_formula_moiety 'C5 H7 Li N4 O4 ' _chemical_formula_sum 'C5 H7 Li N4 O4' _chemical_formula_weight 194.08 _chemical_name_systematic ; Diaquabis[3,7-dihydro-1H-purine-2,6-dione]lithium(I) ; _space_group_IT_number 1 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall 'P 1' _symmetry_space_group_name_H-M 'P 1' _cell_angle_alpha 102.237(7) _cell_angle_beta 93.676(8) _cell_angle_gamma 104.154(6) _cell_formula_units_Z 1 _cell_length_a 5.4017(5) _cell_length_b 8.3903(7) _cell_length_c 4.6325(4) _cell_measurement_reflns_used 25 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 14.45 _cell_measurement_theta_min 12.70 _cell_volume 197.46(3) _computing_cell_refinement 'MSC/AFC Diffractometer Control Software' _computing_data_collection ; MSC/AFC Diffractometer Control Software (Molecular Structure Corporation, 1992) ; _computing_data_reduction 'TEXSAN and PROCESS (Molecular Structure Corporation, 1992)' _computing_molecular_graphics 'ORTEPII (Johnson, 1976) and PLATON (Spek, 2000)' _computing_publication_material 'IUCr SHELXL97 template' _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution ; SIR88 (Burla et al., 1989) and DIRDIF (Beurskens et al., 1994) ; _diffrn_ambient_temperature 293(2) _diffrn_measured_fraction_theta_full 1.000 _diffrn_measured_fraction_theta_max 1.000 _diffrn_measurement_device_type 'Rigaku AFC-5R' _diffrn_measurement_method \w-2\q _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .018 _diffrn_reflns_av_sigmaI/netI .0994 _diffrn_reflns_limit_h_max 7 _diffrn_reflns_limit_h_min -7 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -10 _diffrn_reflns_limit_l_max 6 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 1015 _diffrn_reflns_theta_full 27.50 _diffrn_reflns_theta_max 27.50 _diffrn_reflns_theta_min 2.58 _diffrn_standards_decay_% .07 _diffrn_standards_interval_count 150 _diffrn_standards_number 3 _exptl_absorpt_coefficient_mu .138 _exptl_absorpt_correction_type none _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.632 _exptl_crystal_density_method 'not measured' _exptl_crystal_description prism _exptl_crystal_F_000 100 _exptl_crystal_size_max .13 _exptl_crystal_size_mid .12 _exptl_crystal_size_min .10 _refine_diff_density_max .175 _refine_diff_density_min -.221 _refine_ls_extinction_method 'none required' _refine_ls_goodness_of_fit_ref .868 _refine_ls_hydrogen_treatment mixed _refine_ls_matrix_type full _refine_ls_number_parameters 140 _refine_ls_number_reflns 903 _refine_ls_number_restraints 7 _refine_ls_restrained_S_all .864 _refine_ls_R_factor_all .055 _refine_ls_R_factor_gt .032 _refine_ls_shift/su_max .000 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'w = 1/[\s^2^(Fo^2^)]' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .096 _reflns_number_gt 722 _reflns_number_total 903 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file bk1536.cif _[local]_cod_data_source_block II _[local]_cod_chemical_formula_sum_orig 'C5 H7 Li N4 O4 ' _cod_database_code 2011590 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_disorder_assembly _atom_site_disorder_group _atom_site_type_symbol Li1 .5000(10) .5000(6) .5001(13) .0304(12) Uani d . 1 . . Li O1 .2554(4) -.3906(3) .3795(6) .0326(6) Uani d . 1 . . O O2 .6462(4) .1030(3) .1529(5) .0325(6) Uani d . 1 . . O O3 .7090(5) .6592(3) .8618(5) .0341(6) Uani d D 1 . . O H31 .751(10) .592(6) .963(11) .054 Uiso d D 1 . . H H32 .854(7) .695(6) .797(11) .054 Uiso d D 1 . . H O4 .7537(4) .4451(3) .2435(5) .0309(5) Uani d D 1 . . O H41 .913(6) .482(6) .320(11) .054 Uiso d D 1 . . H H42 .727(10) .336(3) .194(13) .054 Uiso d D 1 . . H N1 .4430(5) -.1383(3) .2833(7) .0256(6) Uani d . 1 . . N H1 .5356 -.1904 .1748 .031 Uiso calc R 1 . . H N3 .1145(5) -.1657(3) .5998(6) .0260(6) Uani d . 1 . . N N7 .3050(6) .2707(4) .5623(7) .0304(6) Uani d . 1 . . N N9 .0275(5) .1067(4) .7833(6) .0300(6) Uani d . 1 . . N H9 -.0906 .0779 .8926 .036 Uiso calc R 1 . . H C2 .2662(5) -.2344(4) .4279(7) .0245(7) Uani d . 1 . . C C4 .1513(5) .0030(4) .6187(7) .0223(6) Uani d . 1 . . C C5 .3236(5) .1062(4) .4826(7) .0222(6) Uani d . 1 . . C C6 .4839(6) .0325(4) .2973(7) .0218(6) Uani d . 1 . . C C8 .1259(7) .2641(4) .7419(8) .0320(7) Uani d . 1 . . C H8 .0721 .3579 .8315 .038 Uiso calc R 1 . . H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 Li1 .029(3) .019(2) .047(3) .009(2) .010(2) .012(2) O1 .0289(11) .0161(11) .0547(15) .0070(9) .0093(11) .0101(10) O2 .0335(12) .0251(12) .0436(14) .0088(9) .0271(11) .0105(10) O3 .0390(14) .0328(14) .0336(14) .0109(11) .0156(11) .0100(11) O4 .0280(11) .0222(11) .0432(14) .0048(9) .0143(10) .0081(10) N1 .0255(11) .0191(12) .0345(14) .0082(9) .0143(11) .0059(10) N3 .0255(13) .0207(13) .0348(14) .0053(10) .0121(11) .0117(11) N7 .0357(14) .0232(14) .0361(15) .0099(11) .0189(12) .0083(12) N9 .0303(13) .0261(13) .0372(15) .0084(11) .0217(12) .0089(11) C2 .0228(14) .0198(15) .0323(17) .0054(11) .0073(13) .0082(13) C4 .0220(14) .0240(14) .0229(15) .0086(11) .0095(13) .0048(11) C5 .0230(14) .0180(13) .0266(15) .0045(11) .0105(13) .0066(12) C6 .0217(13) .0183(14) .0270(15) .0056(11) .0107(12) .0062(11) C8 .0385(17) .0228(16) .0387(18) .0123(13) .0197(15) .0064(13) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag Li1 O1 1_565 1.901(5) yes Li1 O3 . 1.985(6) yes Li1 O4 . 1.946(6) yes Li1 N7 . 2.043(6) yes O1 C2 . 1.268(4) ? O1 Li1 1_545 1.901(5) ? O2 C6 . 1.247(4) ? O3 H31 . .86(3) ? O3 H32 . .86(3) ? O4 H41 . .87(3) ? O4 H42 . .86(3) ? N1 C6 . 1.382(4) ? N1 C2 . 1.395(4) ? N1 H1 . .86 ? N3 C2 . 1.326(4) ? N3 C4 . 1.363(4) ? N7 C8 . 1.314(5) ? N7 C5 . 1.382(4) ? N9 C8 . 1.357(4) ? N9 C4 . 1.362(4) ? N9 H9 . .86 ? C4 C5 . 1.388(4) ? C5 C6 . 1.415(4) ? C8 H8 . .93 ? loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Li Li -.0003 .0001 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N .0061 .0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle _geom_angle_publ_flag O1 Li1 O3 1_565 . 105.5(3) yes O1 Li1 O4 1_565 . 120.9(3) yes O1 Li1 N7 1_565 . 108.3(3) yes O4 Li1 O3 . . 104.1(3) yes O4 Li1 N7 . . 103.6(2) yes O3 Li1 N7 . . 114.9(3) yes C2 O1 Li1 . 1_545 129.8(3) yes H31 O3 H32 . . 100(5) ? Li1 O4 H41 . . 117(4) ? Li1 O4 H42 . . 109(4) ? H41 O4 H42 . . 104(5) ? C6 N1 C2 . . 126.3(3) ? C6 N1 H1 . . 116.8 ? C2 N1 H1 . . 116.8 ? C2 N3 C4 . . 113.6(3) ? C8 N7 C5 . . 104.1(3) ? C8 N7 Li1 . . 119.3(3) yes C5 N7 Li1 . . 136.3(3) yes C8 N9 C4 . . 106.9(3) ? C8 N9 H9 . . 126.5 ? C4 N9 H9 . . 126.5 ? O1 C2 N3 . . 122.4(3) ? O1 C2 N1 . . 116.2(3) ? N3 C2 N1 . . 121.4(3) ? N9 C4 N3 . . 126.5(3) ? N9 C4 C5 . . 105.4(3) ? N3 C4 C5 . . 128.1(3) ? N7 C5 C4 . . 110.3(3) ? N7 C5 C6 . . 131.4(3) ? C4 C5 C6 . . 118.3(3) ? O2 C6 N1 . . 119.9(3) ? O2 C6 C5 . . 127.8(3) ? N1 C6 C5 . . 112.3(3) ? N7 C8 N9 . . 113.2(3) ? N7 C8 H8 . . 123.4 ? N9 C8 H8 . . 123.4 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag O3 H31 O4 1_556 .86(3) 1.98(3) 2.814(3) 163(5) yes O3 H32 N3 1_665 .86(3) 2.00(3) 2.820(4) 159(5) yes O4 H41 O1 1_665 .87(3) 1.86(3) 2.689(3) 159(5) yes O4 H42 O2 . .86(3) 1.86(3) 2.719(3) 170(6) yes N1 H1 O3 1_544 .86 2.13 2.985(4) 171 yes N9 H9 O2 1_456 .86 1.94 2.760(3) 158 yes loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion_site_symmetry_1 _geom_torsion O1 Li1 N7 C8 1_565 -54.2(4) O4 Li1 N7 C8 . 176.3(3) O3 Li1 N7 C8 . 63.4(4) O1 Li1 N7 C5 1_565 133.5(4) O4 Li1 N7 C5 . 4.0(5) O3 Li1 N7 C5 . -108.9(4) Li1 O1 C2 N3 1_545 -112.4(4) Li1 O1 C2 N1 1_545 69.2(5) C4 N3 C2 O1 . -178.6(3) C4 N3 C2 N1 . -.3(5) C6 N1 C2 O1 . 178.5(3) C6 N1 C2 N3 . .1(5) C8 N9 C4 N3 . 178.9(3) C8 N9 C4 C5 . .1(4) C2 N3 C4 N9 . -178.5(3) C2 N3 C4 C5 . .0(5) C8 N7 C5 C4 . .1(4) Li1 N7 C5 C4 . 173.2(3) C8 N7 C5 C6 . -179.2(4) Li1 N7 C5 C6 . -6.1(7) N9 C4 C5 N7 . -.1(3) N3 C4 C5 N7 . -178.9(4) N9 C4 C5 C6 . 179.3(3) N3 C4 C5 C6 . .5(4) C2 N1 C6 O2 . -178.9(3) C2 N1 C6 C5 . .4(4) N7 C5 C6 O2 . -2.1(6) C4 C5 C6 O2 . 178.6(3) N7 C5 C6 N1 . 178.6(3) C4 C5 C6 N1 . -.6(4) C5 N7 C8 N9 . -.1(4) Li1 N7 C8 N9 . -174.6(3) C4 N9 C8 N7 . .0(4) _cod_database_fobs_code 2011590