#------------------------------------------------------------------------------ #$Date: 2011-09-10 04:16:28 +0100 (Sat, 10 Sep 2011) $ #$Revision: 25271 $ #$URL: svn://www.crystallography.net/cod/cif/2/2012080.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012080 loop_ _publ_author_name 'Clark, Robert W.' 'Guzei, Ilia A.' 'Ivanov, Sergei A.' 'Burke, Steven D.' 'Lambert, William T.' _publ_section_title ; The lack of C2 molecular symmetry in (1R,2R,3S,6S)-3,6-dibenzyloxycyclohex-4-ene-1,2-diol ; _journal_issue 7 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 844 _journal_page_last 845 _journal_volume 57 _journal_year 2001 _chemical_formula_moiety 'C20 H22 O4' _chemical_formula_sum 'C20 H22 O4' _chemical_formula_weight 326.38 _space_group_IT_number 19 _symmetry_cell_setting orthorhombic _symmetry_space_group_name_Hall 'P 2ac 2ab' _symmetry_space_group_name_H-M 'P 21 21 21' _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 90.00 _cell_formula_units_Z 4 _cell_length_a 8.5979(9) _cell_length_b 10.1090(10) _cell_length_c 18.9828(18) _cell_measurement_reflns_used 1921 _cell_measurement_temperature 173(2) _cell_measurement_theta_max 50.0 _cell_measurement_theta_min 2.0 _cell_volume 1649.9(3) _computing_cell_refinement SMART _computing_data_collection 'SMART (Siemens, 1996)' _computing_data_reduction 'SHELXTL (Sheldrick, 1997)' _computing_molecular_graphics SHELXTL _computing_publication_material SHELXTL _computing_structure_refinement 'SHELXL97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS97 (Sheldrick, 1990)' _diffrn_ambient_temperature 173(2) _diffrn_measured_fraction_theta_full .960 _diffrn_measured_fraction_theta_max .960 _diffrn_measurement_device_type 'Bruker CCD-1000 area detector' _diffrn_measurement_method '\f and \w scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength .71073 _diffrn_reflns_av_R_equivalents .0177 _diffrn_reflns_av_sigmaI/netI .0332 _diffrn_reflns_limit_h_max 10 _diffrn_reflns_limit_h_min -10 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min 0 _diffrn_reflns_limit_l_max 22 _diffrn_reflns_limit_l_min 0 _diffrn_reflns_number 3184 _diffrn_reflns_theta_full 26.38 _diffrn_reflns_theta_max 26.38 _diffrn_reflns_theta_min 2.28 _exptl_absorpt_coefficient_mu .091 _exptl_absorpt_correction_T_max .9647 _exptl_absorpt_correction_T_min .9460 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details ; (SADABS; Blessing, 1995) ; _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.314 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 696 _exptl_crystal_size_max .62 _exptl_crystal_size_mid .62 _exptl_crystal_size_min .40 _refine_diff_density_max .157 _refine_diff_density_min -.139 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.002 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 219 _refine_ls_number_reflns 1869 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.002 _refine_ls_R_factor_all .0393 _refine_ls_R_factor_gt .0329 _refine_ls_shift/su_max <0.001 _refine_ls_shift/su_mean .000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0473P)^2^] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .0790 _reflns_number_gt 1625 _reflns_number_total 1869 _reflns_threshold_expression I>2\s(I) _[local]_cod_data_source_file fg1630.cif _[local]_cod_data_source_block I _[local]_cod_cif_authors_sg_H-M P212121 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Orthorhombic' changed to 'orthorhombic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. '_geom_bond_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). '_geom_torsion_publ_flag' value 'Y' changed to 'y' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29 (4 times). Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012080 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x+1/2, -y, z+1/2' '-x, y+1/2, -z+1/2' 'x+1/2, -y+1/2, -z' loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_calc_flag _atom_site_refinement_flags _atom_site_occupancy _atom_site_type_symbol O1 .49733(18) .89156(12) .06757(7) .0317(4) Uani d . 1 O O2 .50548(19) 1.08578(13) .16656(8) .0369(4) Uani d . 1 O H2 .4920 1.1075 .1243 .055 Uiso calc R 1 H O3 .34986(16) .82285(14) .27480(8) .0331(4) Uani d . 1 O H3 .4086 .7678 .2946 .050 Uiso calc R 1 H O4 .61733(17) .87617(13) .35123(6) .0294(3) Uani d . 1 O C1 .6922(2) .8380(2) .23195(10) .0298(5) Uani d . 1 C H1 .7884 .8020 .2474 .036 Uiso calc R 1 H C2 .6417(2) .8068(2) .16817(11) .0300(5) Uani d . 1 C H2A .7064 .7538 .1390 .036 Uiso calc R 1 H C3 .4883(2) .8506(2) .13992(10) .0274(4) Uani d . 1 C H3A .4137 .7750 .1433 .033 Uiso calc R 1 H C4 .4217(2) .96691(18) .18099(10) .0274(5) Uani d . 1 C H4 .3099 .9793 .1681 .033 Uiso calc R 1 H C5 .4347(2) .9397(2) .25963(10) .0267(4) Uani d . 1 C H5 .3872 1.0152 .2860 .032 Uiso calc R 1 H C6 .6051(2) .92721(19) .28076(10) .0269(5) Uani d . 1 C H6 .6539 1.0170 .2793 .032 Uiso calc R 1 H C7 .4894(3) .7851(2) .01935(10) .0340(5) Uani d . 1 C H7A .3921 .7348 .0270 .041 Uiso calc R 1 H H7B .5782 .7245 .0272 .041 Uiso calc R 1 H C8 .4936(2) .8369(2) -.05522(10) .0282(4) Uani d . 1 C C9 .5592(2) .7603(2) -.10810(11) .0333(5) Uani d . 1 C H9 .6035 .6767 -.0972 .040 Uiso calc R 1 H C10 .5599(2) .8061(2) -.17714(11) .0382(6) Uani d . 1 C H10 .6045 .7536 -.2134 .046 Uiso calc R 1 H C11 .4966(3) .9269(2) -.19314(12) .0394(5) Uani d . 1 C H11 .4982 .9581 -.2403 .047 Uiso calc R 1 H C12 .4305(3) 1.0033(2) -.14100(11) .0397(6) Uani d . 1 C H12 .3851 1.0863 -.1523 .048 Uiso calc R 1 H C13 .4307(3) .9583(2) -.07210(11) .0340(5) Uani d . 1 C H13 .3870 1.0117 -.0360 .041 Uiso calc R 1 H C14 .6098(3) .9794(2) .40260(10) .0362(5) Uani d . 1 C H14A .5345 1.0475 .3870 .043 Uiso calc R 1 H H14B .7131 1.0219 .4070 .043 Uiso calc R 1 H C15 .5607(2) .92596(19) .47313(10) .0263(4) Uani d . 1 C C16 .4230(3) .8572(2) .48053(12) .0367(5) Uani d . 1 C H16 .3620 .8381 .4401 .044 Uiso calc R 1 H C17 .3728(3) .8157(2) .54590(12) .0459(6) Uani d . 1 C H17 .2769 .7698 .5504 .055 Uiso calc R 1 H C18 .4624(3) .8410(2) .60502(12) .0448(6) Uani d . 1 C H18 .4285 .8119 .6501 .054 Uiso calc R 1 H C19 .6004(3) .9084(2) .59835(11) .0405(6) Uani d . 1 C H19 .6619 .9264 .6388 .049 Uiso calc R 1 H C20 .6496(2) .9500(2) .53252(10) .0326(5) Uani d . 1 C H20 .7456 .9958 .5281 .039 Uiso calc R 1 H loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0476(8) .0297(7) .0179(8) -.0041(7) .0001(7) -.0007(6) O2 .0558(9) .0268(7) .0282(8) -.0035(7) -.0034(8) .0038(6) O3 .0331(8) .0341(8) .0320(9) -.0018(6) .0014(7) .0028(7) O4 .0408(8) .0296(7) .0178(7) .0016(7) -.0019(6) -.0013(6) C1 .0274(10) .0371(11) .0250(12) .0058(9) .0010(9) .0030(9) C2 .0334(11) .0308(11) .0258(12) .0051(9) .0074(9) -.0011(9) C3 .0369(11) .0280(10) .0174(10) -.0027(10) .0002(9) .0019(9) C4 .0304(10) .0260(10) .0260(12) .0025(9) -.0024(9) -.0004(8) C5 .0310(10) .0249(10) .0242(11) .0018(9) .0028(9) -.0028(8) C6 .0338(11) .0277(10) .0193(10) -.0008(9) -.0023(9) .0007(8) C7 .0462(12) .0287(10) .0271(12) -.0017(10) .0007(11) -.0019(9) C8 .0283(10) .0327(10) .0235(11) -.0067(9) -.0027(9) -.0006(9) C9 .0320(11) .0355(11) .0324(13) -.0012(9) -.0020(10) -.0044(10) C10 .0330(11) .0560(15) .0255(13) -.0069(11) .0031(10) -.0137(11) C11 .0425(12) .0561(14) .0195(11) -.0125(13) -.0036(10) .0037(11) C12 .0474(13) .0387(12) .0330(13) -.0008(11) -.0122(11) .0027(11) C13 .0387(11) .0388(12) .0246(12) .0029(10) -.0021(10) -.0043(9) C14 .0563(14) .0303(11) .0220(12) -.0063(10) .0015(11) -.0041(9) C15 .0324(10) .0240(9) .0224(11) .0028(9) .0012(9) -.0022(8) C16 .0377(12) .0396(12) .0327(13) -.0035(10) -.0025(11) -.0064(10) C17 .0459(13) .0458(13) .0459(15) -.0173(12) .0133(12) -.0040(12) C18 .0667(17) .0371(12) .0306(13) -.0039(12) .0125(12) .0022(11) C19 .0565(15) .0417(13) .0232(12) .0005(11) -.0056(11) -.0015(10) C20 .0333(11) .0369(11) .0275(13) -.0039(10) -.0004(10) -.0039(9) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C .0033 .0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H .0000 .0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O .0106 .0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle C7 O1 C3 113.38(14) C4 O2 H2 109.5 C5 O3 H3 109.5 C14 O4 C6 111.67(14) C2 C1 C6 123.14(18) C2 C1 H1 118.4 C6 C1 H1 118.4 C1 C2 C3 123.20(19) C1 C2 H2A 118.4 C3 C2 H2A 118.4 O1 C3 C2 112.43(16) O1 C3 C4 106.71(15) C2 C3 C4 112.22(16) O1 C3 H3A 108.4 C2 C3 H3A 108.4 C4 C3 H3A 108.4 O2 C4 C5 107.64(16) O2 C4 C3 111.21(16) C5 C4 C3 109.59(15) O2 C4 H4 109.5 C5 C4 H4 109.5 C3 C4 H4 109.5 O3 C5 C4 108.17(16) O3 C5 C6 111.82(17) C4 C5 C6 110.11(16) O3 C5 H5 108.9 C4 C5 H5 108.9 C6 C5 H5 108.9 O4 C6 C1 108.89(15) O4 C6 C5 110.19(16) C1 C6 C5 111.64(17) O4 C6 H6 108.7 C1 C6 H6 108.7 C5 C6 H6 108.7 O1 C7 C8 110.00(16) O1 C7 H7A 109.7 C8 C7 H7A 109.7 O1 C7 H7B 109.7 C8 C7 H7B 109.7 H7A C7 H7B 108.2 C13 C8 C9 119.21(19) C13 C8 C7 121.13(19) C9 C8 C7 119.65(18) C8 C9 C10 119.9(2) C8 C9 H9 120.1 C10 C9 H9 120.1 C11 C10 C9 120.3(2) C11 C10 H10 119.9 C9 C10 H10 119.9 C10 C11 C12 120.2(2) C10 C11 H11 119.9 C12 C11 H11 119.9 C11 C12 C13 119.6(2) C11 C12 H12 120.2 C13 C12 H12 120.2 C8 C13 C12 120.8(2) C8 C13 H13 119.6 C12 C13 H13 119.6 O4 C14 C15 110.96(16) O4 C14 H14A 109.4 C15 C14 H14A 109.4 O4 C14 H14B 109.4 C15 C14 H14B 109.4 H14A C14 H14B 108.0 C16 C15 C20 118.66(19) C16 C15 C14 120.80(19) C20 C15 C14 120.48(18) C17 C16 C15 120.9(2) C17 C16 H16 119.6 C15 C16 H16 119.6 C16 C17 C18 119.9(2) C16 C17 H17 120.0 C18 C17 H17 120.0 C19 C18 C17 119.8(2) C19 C18 H18 120.1 C17 C18 H18 120.1 C18 C19 C20 119.8(2) C18 C19 H19 120.1 C20 C19 H19 120.1 C15 C20 C19 120.9(2) C15 C20 H20 119.6 C19 C20 H20 119.6 loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_publ_flag O1 C7 1.414(2) y O1 C3 1.437(2) ? O2 C4 1.428(2) y O2 H2 .8400 ? O3 C5 1.418(2) y O3 H3 .8400 ? O4 C14 1.430(2) y O4 C6 1.437(2) ? C1 C2 1.324(3) ? C1 C6 1.494(3) ? C1 H1 .9500 ? C2 C3 1.492(3) ? C2 H2A .9500 ? C3 C4 1.522(3) ? C3 H3A 1.0000 ? C4 C5 1.522(3) ? C4 H4 1.0000 ? C5 C6 1.524(3) ? C5 H5 1.0000 ? C6 H6 1.0000 ? C7 C8 1.510(3) ? C7 H7A .9900 ? C7 H7B .9900 ? C8 C13 1.379(3) ? C8 C9 1.387(3) ? C9 C10 1.390(3) ? C9 H9 .9500 ? C10 C11 1.371(3) ? C10 H10 .9500 ? C11 C12 1.377(3) ? C11 H11 .9500 ? C12 C13 1.385(3) ? C12 H12 .9500 ? C13 H13 .9500 ? C14 C15 1.504(3) ? C14 H14A .9900 ? C14 H14B .9900 ? C15 C16 1.380(3) ? C15 C20 1.384(3) ? C16 C17 1.379(3) ? C16 H16 .9500 ? C17 C18 1.385(3) ? C17 H17 .9500 ? C18 C19 1.374(3) ? C18 H18 .9500 ? C19 C20 1.385(3) ? C19 H19 .9500 ? C20 H20 .9500 ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA O3 H3 O2 3_645 .84 2.12 2.920(2) 160 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag C6 C1 C2 C3 -3.8(3) ? C7 O1 C3 C2 83.1(2) ? C7 O1 C3 C4 -153.49(18) ? C1 C2 C3 O1 138.4(2) ? C1 C2 C3 C4 18.1(3) y O1 C3 C4 O2 -51.4(2) ? C2 C3 C4 O2 72.2(2) ? O1 C3 C4 C5 -170.27(15) ? C2 C3 C4 C5 -46.7(2) ? O2 C4 C5 O3 179.13(15) ? C3 C4 C5 O3 -59.8(2) ? O2 C4 C5 C6 -58.4(2) ? C3 C4 C5 C6 62.7(2) ? C14 O4 C6 C1 150.68(17) ? C14 O4 C6 C5 -86.6(2) ? C2 C1 C6 O4 140.6(2) ? C2 C1 C6 C5 18.7(3) y O3 C5 C6 O4 -48.4(2) ? C4 C5 C6 O4 -168.66(15) ? O3 C5 C6 C1 72.7(2) ? C4 C5 C6 C1 -47.5(2) ? C3 O1 C7 C8 177.88(17) ? O1 C7 C8 C13 -31.6(3) y O1 C7 C8 C9 149.55(19) ? C13 C8 C9 C10 -.4(3) ? C7 C8 C9 C10 178.5(2) ? C8 C9 C10 C11 .2(3) ? C9 C10 C11 C12 -.5(3) ? C10 C11 C12 C13 1.0(3) ? C9 C8 C13 C12 .9(3) ? C7 C8 C13 C12 -177.9(2) ? C11 C12 C13 C8 -1.2(3) ? C6 O4 C14 C15 157.99(17) ? O4 C14 C15 C16 -56.5(3) y O4 C14 C15 C20 126.4(2) ? C20 C15 C16 C17 1.4(3) ? C14 C15 C16 C17 -175.7(2) ? C15 C16 C17 C18 -1.1(4) ? C16 C17 C18 C19 .6(4) ? C17 C18 C19 C20 -.3(3) ? C16 C15 C20 C19 -1.2(3) ? C14 C15 C20 C19 175.9(2) ? C18 C19 C20 C15 .7(3) ?