#------------------------------------------------------------------------------ #$Date: 2013-12-28 13:58:47 +0000 (Sat, 28 Dec 2013) $ #$Revision: 91933 $ #$URL: svn://www.crystallography.net/cod/cif/2/01/22/2012239.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/. The original data for this entry # were provided by IUCr Journals, http://journals.iucr.org/. # # The file may be used within the scientific community so long as # proper attribution is given to the journal article from which the # data were obtained. # data_2012239 loop_ _publ_author_name 'Elerman, Yal\;c\?in' 'Kara, H\"ulya' 'Prout, Keith' 'Johnston, Andrew' _publ_section_title ;2-[1-(Hydroxyimino)ethyl]-2,5,5-trimethylperhydropyrimidine--butane-2,3-dione monooxime (1/1) ; _journal_issue 10 _journal_name_full 'Acta Crystallographica Section C' _journal_page_first 1222 _journal_page_last 1224 _journal_volume 57 _journal_year 2001 _chemical_formula_iupac 'C9 H19 N3 O , C4 H7 N O2' _chemical_formula_moiety 'C9 H19 N3 O , C4 H7 N O2' _chemical_formula_sum 'C13 H26 N4 O3' _chemical_formula_weight 286.38 _chemical_name_systematic ; 2-[1-(Hydroxyimino)ethyl]-2,5,5-trimethylperhydropyrimidine-butane-2,3-dione monoxime (1/1) ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _cell_angle_alpha 77.095(3) _cell_angle_beta 86.747(3) _cell_angle_gamma 67.554(3) _cell_formula_units_Z 2 _cell_length_a 6.4630(3) _cell_length_b 8.3080(5) _cell_length_c 16.3530(9) _cell_measurement_reflns_used 9950 _cell_measurement_temperature 150 _cell_measurement_theta_max 27 _cell_measurement_theta_min 0 _cell_volume 790.65(8) _computing_cell_refinement 'DIP2000 software and DENZO' _computing_data_collection 'DIP2000 software (Enraf-Nonius, 1995) and DENZO (Otwinowski & Minor, 1996)' _computing_data_reduction 'DIP2000 software and DENZO' _computing_molecular_graphics 'ORTEP-3 (Farrugia, 1997)' _computing_publication_material CRYSTALS _computing_structure_refinement 'CRYSTALS (Watkin et al., 1996)' _computing_structure_solution 'SIR92 (Altomare et al., 1994)' _diffrn_ambient_temperature 150 _diffrn_measured_fraction_theta_max .905 _diffrn_measurement_device_type 'Enraf-Nonius DIP2000' _diffrn_measurement_method \w _diffrn_radiation_monochromator graphite _diffrn_radiation_type 'Mo K\a' _diffrn_radiation_wavelength .71069 _diffrn_reflns_av_R_equivalents .02 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min 0 _diffrn_reflns_limit_k_max 10 _diffrn_reflns_limit_k_min -9 _diffrn_reflns_limit_l_max 20 _diffrn_reflns_limit_l_min -20 _diffrn_reflns_number 9950 _diffrn_reflns_theta_max 26.57 _diffrn_reflns_theta_min .00 _diffrn_standards_decay_% .00 _diffrn_standards_interval_count 0 _diffrn_standards_interval_time 0 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu .086 _exptl_absorpt_correction_T_max .965 _exptl_absorpt_correction_T_min .950 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details '(North et al., 1968)' _exptl_crystal_colour colourless _exptl_crystal_density_diffrn 1.203 _exptl_crystal_density_meas 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 312.06 _exptl_crystal_size_max .6 _exptl_crystal_size_mid .4 _exptl_crystal_size_min .4 _refine_diff_density_max .24 _refine_diff_density_min -.26 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref .942 _refine_ls_hydrogen_treatment refall _refine_ls_number_parameters 263 _refine_ls_number_reflns 2703 _refine_ls_R_factor_gt .045 _refine_ls_shift/su_max .006 _refine_ls_structure_factor_coef F _refine_ls_weighting_details ; Chebychev polynomial with 3 parameters (Carruthers & Watkin, 1979), 3.62 1.39 2.47 ; _refine_ls_weighting_scheme calc _refine_ls_wR_factor_ref .048 _reflns_number_gt 2703 _reflns_number_total 2989 _reflns_threshold_expression I>3\s(I) _[local]_cod_data_source_file bj1033.cif _[local]_cod_data_source_block I _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1527 2010-12-29 10:47:43Z saulius The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to /home/saulius/struct/CIF-dictionaries/cif_core.dic dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_values 1715 2011-07-08 13:25:40Z adriana ; _cod_database_code 2012239 loop_ _symmetry_equiv_pos_as_xyz x,y,z -x,-y,-z loop_ _atom_site_label _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy O1 .65024(15) .66126(11) .06487(5) .0235 Uani 1.0000 O2 .27549(16) .32646(12) .41728(5) .0273 Uani 1.0000 O3 .27105(17) .51383(14) .65872(6) .0342 Uani 1.0000 N1 .54651(17) .58632(12) .13235(6) .0191 Uani 1.0000 N2 .36965(17) .41213(13) .25589(6) .0198 Uani 1.0000 N3 .04684(18) .50364(13) .16271(6) .0205 Uani 1.0000 N4 .26012(18) .46414(14) .45491(6) .0237 Uani 1.0000 C1 .3404(2) .62220(14) .11690(7) .0187 Uani 1.0000 C2 .2177(2) .73197(18) .03564(8) .0284 Uani 1.0000 C3 .2154(2) .55804(15) .19176(7) .0186 Uani 1.0000 C4 .4766(2) .24186(15) .22800(8) .0222 Uani 1.0000 C5 .3030(2) .17980(15) .19993(7) .0227 Uani 1.0000 C6 .1473(2) .33454(16) .13426(7) .0232 Uani 1.0000 C7 .0935(2) .71419(17) .23391(9) .0281 Uani 1.0000 C8 .1680(2) .12703(17) .27373(8) .0263 Uani 1.0000 C9 .4235(3) .02104(18) .15906(9) .0336 Uani 1.0000 C10 .2488(2) .55543(18) .58214(8) .0265 Uani 1.0000 C11 .1928(2) .74513(19) .53542(9) .0325 Uani 1.0000 C12 .2726(2) .41425(17) .53552(7) .0243 Uani 1.0000 C13 .3068(3) .23039(19) .58397(8) .0312 Uani 1.0000 H11 .788(4) .628(3) .0895(13) .051(4) Uiso 1.0000 H21 .294(4) .371(3) .3617(14) .051(4) Uiso 1.0000 H31 -.047(3) .499(2) .2050(11) .029(3) Uiso 1.0000 H2 .475(3) .446(2) .2680(10) .029(3) Uiso 1.0000 H111 .232(3) .754(3) .4780(13) .0461(12) Uiso 1.0000 H112 .279(3) .800(2) .5626(11) .0461(12) Uiso 1.0000 H113 .034(4) .803(3) .5398(12) .0461(12) Uiso 1.0000 H131 .363(3) .215(3) .6407(12) .0461(12) Uiso 1.0000 H132 .408(4) .140(3) .5572(12) .0461(12) Uiso 1.0000 H133 .163(4) .215(3) .5927(12) .0461(12) Uiso 1.0000 H81 .051(3) .092(3) .2546(12) .0461(12) Uiso 1.0000 H82 .085(3) .226(3) .3033(12) .0461(12) Uiso 1.0000 H83 .267(3) .030(3) .3144(12) .0461(12) Uiso 1.0000 H41 .570(3) .151(2) .2750(10) .031(2) Uiso 1.0000 H42 .581(3) .250(2) .1820(10) .031(2) Uiso 1.0000 H71 .201(3) .746(3) .2588(12) .0461(12) Uiso 1.0000 H72 -.001(3) .822(3) .1932(12) .0461(12) Uiso 1.0000 H73 -.009(3) .687(3) .2765(12) .0461(12) Uiso 1.0000 H201 .059(4) .771(3) .0434(12) .0461(12) Uiso 1.0000 H202 .262(3) .832(3) .0156(12) .0461(12) Uiso 1.0000 H203 .257(3) .660(3) -.0066(12) .0461(12) Uiso 1.0000 H61 .231(3) .350(2) .0825(11) .031(2) Uiso 1.0000 H62 .017(3) .303(2) .1200(10) .031(2) Uiso 1.0000 H91 .518(3) .049(3) .1112(12) .0461(12) Uiso 1.0000 H92 .520(3) -.083(3) .1986(12) .0461(12) Uiso 1.0000 H93 .308(3) -.016(3) .1384(12) .0461(12) Uiso 1.0000 loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_12 _atom_site_aniso_U_13 _atom_site_aniso_U_23 O1 .0213(4) .0304(4) .0203(4) -.0141(4) .0041(4) -.0015(3) O2 .0335(5) .0379(5) .0177(4) -.0205(4) .0028(4) -.0084(4) O3 .0309(5) .0551(6) .0238(4) -.0201(5) .0021(4) -.0162(4) N1 .0207(5) .0220(4) .0174(4) -.0114(4) .0039(4) -.0043(3) N2 .0207(5) .0256(5) .0174(4) -.0128(4) -.0007(4) -.0058(4) N3 .0172(5) .0232(5) .0234(5) -.0101(4) .0004(4) -.0052(4) N4 .0192(5) .0348(5) .0209(5) -.0133(4) .0019(4) -.0086(4) C1 .0205(6) .0189(5) .0187(5) -.0087(4) .0014(5) -.0058(4) C2 .0249(7) .0339(6) .0249(6) -.0134(5) -.0034(5) .0014(5) C3 .0182(5) .0211(5) .0197(5) -.0099(4) .0021(5) -.0066(4) C4 .0195(6) .0227(5) .0226(5) -.0072(4) .0007(5) -.0029(4) C5 .0258(6) .0215(5) .0235(5) -.0110(5) .0038(5) -.0074(4) C6 .0265(6) .0251(6) .0225(6) -.0132(5) -.0013(5) -.0072(4) C7 .0304(7) .0269(6) .0325(6) -.0141(5) .0118(6) -.0144(5) C8 .0291(7) .0252(6) .0276(6) -.0143(5) .0039(6) -.0051(5) C9 .0400(8) .0255(6) .0381(7) -.0130(6) .0104(7) -.0137(6) C10 .0167(6) .0419(7) .0253(6) -.0134(5) .0026(5) -.0124(5) C11 .0262(7) .0394(7) .0363(7) -.0146(6) .0052(6) -.0141(6) C12 .0174(6) .0366(7) .0199(5) -.0109(5) .0006(5) -.0070(5) C13 .0323(7) .0368(7) .0214(6) -.0113(6) .0016(6) -.0035(5) loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_site_symmetry_1 _geom_bond_site_symmetry_2 _geom_bond_distance _geom_bond_publ_flag O1 N1 . . 1.4081(12) yes O1 H11 . . .91(2) no O2 N4 . . 1.3848(13) yes O2 H21 . . .92(2) no O3 C10 . . 1.2237(16) yes N1 C1 . . 1.2759(16) yes N2 C3 . . 1.4803(14) yes N2 C4 . . 1.4808(15) yes N2 H2 . . .879(18) no N3 C3 . . 1.4654(14) yes N3 C6 . . 1.4740(15) yes N3 H31 . . .898(18) no N4 C12 . . 1.2879(16) yes C1 C2 . . 1.5010(16) yes C3 C1 . . 1.5366(16) yes C5 C4 . . 1.5301(16) yes C5 C6 . . 1.5286(16) yes C3 C7 . . 1.5284(16) no C10 C11 . . 1.5023(19) no C10 C12 . . 1.4930(17) yes C11 H111 . . .95(2) no C11 H112 . . 1.016(19) no C11 H113 . . .96(2) no C12 C13 . . 1.4938(19) no C5 C8 . . 1.5320(17) no C5 C9 . . 1.5306(17) no C13 H131 . . .980(19) no C13 H132 . . .96(2) no C13 H133 . . .98(2) no C8 H81 . . 1.00(2) no C8 H82 . . 1.00(2) no C8 H83 . . .96(2) no C4 H41 . . .989(17) no C4 H42 . . .995(18) no C7 H71 . . .97(2) no C7 H72 . . .99(2) no C7 H73 . . .98(2) no C2 H201 . . .96(2) no C2 H202 . . .97(2) no C2 H203 . . .975(19) no C6 H61 . . .990(17) no C6 H62 . . 1.024(17) no C9 H91 . . 1.01(2) no C9 H92 . . .97(2) no C9 H93 . . 1.01(2) no loop_ _atom_type_symbol _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source 'C ' .0020 .0020 International_Tables_Vol_IV_Table_2.2B 'H ' .0000 .0000 International_Tables_Vol_IV_Table_2.2B 'O ' .0080 .0060 International_Tables_Vol_IV_Table_2.2B 'N ' .0040 .0030 International_Tables_Vol_IV_Table_2.2B loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_publ_flag N1 O1 H11 99.1(13) no N4 O2 H21 102.7(12) no O1 N1 C1 113.06(9) yes C3 N2 C4 113.52(8) yes C3 N2 H2 108.2(10) no C4 N2 H2 108.4(11) no C3 N3 C6 112.50(10) yes C3 N3 H31 106.8(10) no C6 N3 H31 112.9(10) no O2 N4 C12 111.60(10) yes N1 C1 C3 114.66(9) yes N1 C1 C2 124.41(11) yes C3 C1 C2 120.70(10) no N2 C3 C7 107.16(9) yes N2 C3 C1 112.22(9) yes N2 C4 C5 111.80(10) yes N3 C3 N2 110.88(9) yes N3 C3 C1 110.26(9) yes N3 C3 C7 107.90(10) yes N3 C6 C5 113.85(9) yes N4 C12 C10 115.69(11) yes N4 C12 C13 125.26(12) no C1 C3 C7 108.25(9) no O3 C10 C11 121.16(12) yes O3 C10 C12 118.67(12) yes C11 C10 C12 120.15(11) no C10 C11 H111 112.7(11) no C10 C11 H112 109.0(11) no H111 C11 H112 107.6(15) no C10 C11 H113 105.4(11) no H111 C11 H113 110.4(17) no H112 C11 H113 111.9(15) no C10 C12 C13 119.05(11) no C8 C5 C4 111.60(10) no C8 C5 C6 110.10(10) no C4 C5 C6 107.24(9) no C8 C5 C9 110.00(10) no C4 C5 C9 108.92(11) no C6 C5 C9 108.90(10) no C12 C13 H131 108.8(11) no C12 C13 H132 112.3(11) no H131 C13 H132 110.5(16) no C12 C13 H133 110.8(11) no H131 C13 H133 104.3(16) no H132 C13 H133 109.8(16) no C5 C8 H81 111.2(11) no C5 C8 H82 113.9(11) no H81 C8 H82 105.0(16) no C5 C8 H83 109.4(12) no H81 C8 H83 109.8(16) no H82 C8 H83 107.3(15) no N2 C4 H41 108.1(9) no C5 C4 H41 109.7(9) no N2 C4 H42 112.2(9) no C5 C4 H42 108.8(9) no H41 C4 H42 106.0(13) no C3 C7 H71 110.1(12) no C3 C7 H72 111.9(11) no H71 C7 H72 107.0(16) no C3 C7 H73 111.9(11) no H71 C7 H73 110.3(16) no H72 C7 H73 105.4(16) no C1 C2 H201 109.8(11) no C1 C2 H202 109.9(11) no H201 C2 H202 111.1(16) no C1 C2 H203 109.4(11) no H201 C2 H203 109.0(16) no H202 C2 H203 107.6(16) no N3 C6 H61 110.4(9) no C5 C6 H61 108.8(10) no N3 C6 H62 106.5(9) no C5 C6 H62 108.9(9) no H61 C6 H62 108.3(13) no C5 C9 H91 112.7(11) no C5 C9 H92 112.6(11) no H91 C9 H92 107.3(16) no C5 C9 H93 108.8(11) no H91 C9 H93 109.6(15) no H92 C9 H93 105.6(15) no loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_site_symmetry_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_publ_flag N2 H2 N1 . .88(2) 2.37(2) 2.6791(15) 101.0(10) y N2 H2 O3 2_666 .88(2) 2.25(2) 3.0924(16) 161.0(10) y O1 H11 N3 1_655 .91(3) 1.91(2) 2.7949(15) 162(2) y O2 H21 N2 . .92(2) 1.77(2) 2.6743(13) 168(2) y C6 H61 O1 2_665 .99(2) 2.50(2) 3.4377(14) 159(2) y C11 H111 N4 . .95(2) 2.46(2) 2.8115(18) 102(2) y C13 H131 O3 . .98(2) 2.40(2) 2.8162(19) 105(2) y loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_publ_flag O1 N1 C1 C2 .22(16) ? O1 N1 C1 C3 -174.46(9) ? C4 N2 C3 N3 54.24(13) ? C4 N2 C3 C1 -69.57(13) y C4 N2 C3 C7 171.73(11) ? C3 N2 C4 C5 -56.05(14) y C6 N3 C3 N2 -52.95(12) ? C6 N3 C3 C1 71.98(12) y C6 N3 C3 C7 -170.00(10) ? C3 N3 C6 C5 55.30(14) y N1 C1 C3 N2 -21.58(14) ? N1 C1 C3 N3 -145.73(10) ? N1 C1 C3 C7 96.47(12) ? C2 C1 C3 N2 163.52(11) ? C2 C1 C3 N3 39.37(14) ? C2 C1 C3 C7 -78.42(14) ? N2 C4 C5 C6 53.34(13) ? N2 C4 C5 C8 -67.33(13) ? N2 C4 C5 C9 171.02(10) ? C4 C5 C6 N3 -53.79(14) ? C8 C5 C6 N3 67.81(14) y C9 C5 C6 N3 -171.49(12) ? O2 N4 C12 C10 -177.73(11) y O2 N4 C12 C13 1.9(2) ? O3 C10 C12 N4 -176.18(14) y O3 C10 C12 C13 4.2(2) ? C11 C10 C12 N4 5.37(19) ? C11 C10 C12 C13 -174.25(14) y _journal_paper_doi 10.1107/S0108270101012926